HOME miRNA TABLE miRNA DEEP-SEQ IN SILICO TARGETS DEGRADOME TARGETS GOrilla INTRONS DOWNLOADS CONTACT




Malus x domestica: degradome data Filter by mature miRNA sequence or return all


name

sequence

fragment abundance

weighted fragment abundance

p-value

cleavage position

alignment score

plot

alignment

transcript name

duplex

BLAST search

most similar mature

mdm-MIR89N AGAGAAAATTCATTCCAACGC 4 4 0.02 607 3 plot alignment gnl|UG|Mdo#S43678563
 5'     AGAGAAAATTCATTCCAACGC        3'
         |||||| ||||||| |||||
 3' AGTGGCTCTTTGAAGTAAGTTTGCGGGTGACC 5'
UniProt best hit: sp|Q39255|SKP1A_ARATH (E-value = 7e-74)
miRBase: no hits
None

Entries Per Page
Displaying Page of