(119 letters)

Database: hairpin_length.fa 
           18,432 sequences; 1,887,117 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mdm-MIR7121g_MI0023150_100                                            198   3e-52
mdm-MIR7121a_MI0023144_132                                            127   8e-31
mdm-MIR7121b_MI0023145_172                                            111   5e-26
mdm-MIR7121e_MI0023148_121                                            100   2e-22
mdm-MIR7121h_MI0023151_121                                            100   2e-22
mdm-MIR7121d_MI0023147_121                                            100   2e-22
mdm-MIR7121c_MI0023146_135                                             82   4e-17
mdm-MIR7121f_MI0023149_88                                              44   9e-06

>mdm-MIR7121g_MI0023150_100
          Length = 100

 Score =  198 bits (100), Expect = 3e-52
 Identities = 100/100 (100%)
 Strand = Plus / Plus

                                                                       
Query: 11  tattaccctcctcctcttggtgatcgccctgccccatatggtcttctgaattcagggcct 70
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tattaccctcctcctcttggtgatcgccctgccccatatggtcttctgaattcagggcct 60

                                                   
Query: 71  gcatatcgacagggtggttaccaatgggatgacggtaata 110
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gcatatcgacagggtggttaccaatgggatgacggtaata 100


>mdm-MIR7121a_MI0023144_132
          Length = 132

 Score =  127 bits (64), Expect = 8e-31
 Identities = 102/115 (88%), Gaps = 6/115 (5%)
 Strand = Plus / Plus

                                                                       
Query: 3   aatattactattaccctcctcctcttggtgatcgccctgccccatatggtcttctgaatt 62
           ||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||| |||
Sbjct: 12  aatattactattaccatcctcctcttggtgatcgccctgtcccatatggccttctggatt 71

                                                                  
Query: 63  cagggcctgcatatcgacagggtggttaccaatgggatgacggtaatatttaatt 117
           ||||||||||      |||||||| ||| ||| ||||||||||||||||||||||
Sbjct: 72  cagggcctgc------acagggtgattaacaaagggatgacggtaatatttaatt 120


>mdm-MIR7121b_MI0023145_172
          Length = 172

 Score =  111 bits (56), Expect = 5e-26
 Identities = 101/115 (87%), Gaps = 7/115 (6%)
 Strand = Plus / Plus

                                                                       
Query: 3   aatattactattaccctcctcctcttggtgatcgccctgccccatatggtcttctgaatt 62
           ||||||||||||||| ||||||||||||||||||||||| | ||||||| |||||| |||
Sbjct: 33  aatattactattaccatcctcctcttggtgatcgccctgtcgcatatgg-cttctggatt 91

                                                                  
Query: 63  cagggcctgcatatcgacagggtggttaccaatgggatgacggtaatatttaatt 117
           |||||||||       |||||||| ||||||| ||||||||||||||||||||||
Sbjct: 92  cagggcctg------tacagggtgattaccaaagggatgacggtaatatttaatt 140


>mdm-MIR7121e_MI0023148_121
          Length = 121

 Score = 99.6 bits (50), Expect = 2e-22
 Identities = 56/58 (96%)
 Strand = Plus / Plus

                                                                     
Query: 53  cttctgaattcagggcctgcatatcgacagggtggttaccaatgggatgacggtaata 110
           |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 64  cttctggattcagggcctgcatatggacagggtggttaccaatgggatgacggtaata 121



 Score = 71.9 bits (36), Expect = 4e-14
 Identities = 55/61 (90%), Gaps = 4/61 (6%)
 Strand = Plus / Plus

                                                                      
Query: 11 tattaccctcctcctcttggtgatcgccctgc----cccatatggtcttctgaattcagg 66
          |||||||||| |||||||||||||||||||||    ||||||||| ||||||||||||||
Sbjct: 1  tattaccctcatcctcttggtgatcgccctgccccacccatatggccttctgaattcagg 60

           
Query: 67 g 67
          |
Sbjct: 61 g 61


>mdm-MIR7121h_MI0023151_121
          Length = 121

 Score = 99.6 bits (50), Expect = 2e-22
 Identities = 56/58 (96%)
 Strand = Plus / Plus

                                                                     
Query: 53  cttctgaattcagggcctgcatatcgacagggtggttaccaatgggatgacggtaata 110
           |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 64  cttctggattcagggcctgcatatggacagggtggttaccaatgggatgacggtaata 121



 Score = 71.9 bits (36), Expect = 4e-14
 Identities = 55/61 (90%), Gaps = 4/61 (6%)
 Strand = Plus / Plus

                                                                      
Query: 11 tattaccctcctcctcttggtgatcgccctgc----cccatatggtcttctgaattcagg 66
          |||||||||| |||||||||||||||||||||    ||||||||| ||||||||||||||
Sbjct: 1  tattaccctcatcctcttggtgatcgccctgccccacccatatggccttctgaattcagg 60

           
Query: 67 g 67
          |
Sbjct: 61 g 61


>mdm-MIR7121d_MI0023147_121
          Length = 121

 Score = 99.6 bits (50), Expect = 2e-22
 Identities = 56/58 (96%)
 Strand = Plus / Plus

                                                                     
Query: 53  cttctgaattcagggcctgcatatcgacagggtggttaccaatgggatgacggtaata 110
           |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 64  cttctggattcagggcctgcatatggacagggtggttaccaatgggatgacggtaata 121



 Score = 71.9 bits (36), Expect = 4e-14
 Identities = 55/61 (90%), Gaps = 4/61 (6%)
 Strand = Plus / Plus

                                                                      
Query: 11 tattaccctcctcctcttggtgatcgccctgc----cccatatggtcttctgaattcagg 66
          |||||||||| |||||||||||||||||||||    ||||||||| ||||||||||||||
Sbjct: 1  tattaccctcatcctcttggtgatcgccctgccccacccatatggccttctgaattcagg 60

           
Query: 67 g 67
          |
Sbjct: 61 g 61


>mdm-MIR7121c_MI0023146_135
          Length = 135

 Score = 81.8 bits (41), Expect = 4e-17
 Identities = 65/73 (89%)
 Strand = Plus / Plus

                                                                      
Query: 11 tattaccctcctcctcttggtgatcgccctgccccatatggtcttctgaattcagggcct 70
          ||||||| || |||||||||||||||||||| ||||||||  |||||| |||||||| ||
Sbjct: 1  tattaccatcktcctcttggtgatcgccctgtcccatatgtccttctggattcagggtct 60

                       
Query: 71 gcatatcgacagg 83
          |||||| ||||||
Sbjct: 61 gcatatggacagg 73



 Score = 67.9 bits (34), Expect = 6e-13
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                     
Query: 53  cttctgaattcagggcctgcatatcgacagggtggttaccaatgggatgacggtaata 110
           |||||| |||||||| |||||||| ||||||||| ||||||| | |||||||||||||
Sbjct: 78  cttctggattcagggtctgcatatggacagggtgattaccaaggtgatgacggtaata 135


>mdm-MIR7121f_MI0023149_88
          Length = 88

 Score = 44.1 bits (22), Expect = 9e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 22 tcctcttggtgatcgccctgcc 43
          ||||||||||||||||||||||
Sbjct: 1  tcctcttggtgatcgccctgcc 22



 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 53 cttctgaattcagggcctgcatatcgaca 81
          |||||| ||||||||||||||||| ||||
Sbjct: 42 cttctggattcagggcctgcatatggaca 70


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.