(140 letters)

Database: hairpin_length.fa 
           18,432 sequences; 1,887,117 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mdm-MIR7121e_MI0023148_121                                            240   9e-65
mdm-MIR7121h_MI0023151_121                                            240   9e-65
mdm-MIR7121d_MI0023147_121                                            240   9e-65
mdm-MIR7121g_MI0023150_100                                            100   2e-22
mdm-MIR7121c_MI0023146_135                                             84   1e-17
mdm-MIR7121f_MI0023149_88                                              68   7e-13
mdm-MIR7121a_MI0023144_132                                             64   1e-11
mdm-MIR7121b_MI0023145_172                                             62   5e-11

>mdm-MIR7121e_MI0023148_121
          Length = 121

 Score =  240 bits (121), Expect = 9e-65
 Identities = 121/121 (100%)
 Strand = Plus / Plus

                                                                       
Query: 11  tattaccctcatcctcttggtgatcgccctgccccacccatatggccttctgaattcagg 70
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tattaccctcatcctcttggtgatcgccctgccccacccatatggccttctgaattcagg 60

                                                                       
Query: 71  gaacttctggattcagggcctgcatatggacagggtggttaccaatgggatgacggtaat 130
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gaacttctggattcagggcctgcatatggacagggtggttaccaatgggatgacggtaat 120

            
Query: 131 a 131
           |
Sbjct: 121 a 121


>mdm-MIR7121h_MI0023151_121
          Length = 121

 Score =  240 bits (121), Expect = 9e-65
 Identities = 121/121 (100%)
 Strand = Plus / Plus

                                                                       
Query: 11  tattaccctcatcctcttggtgatcgccctgccccacccatatggccttctgaattcagg 70
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tattaccctcatcctcttggtgatcgccctgccccacccatatggccttctgaattcagg 60

                                                                       
Query: 71  gaacttctggattcagggcctgcatatggacagggtggttaccaatgggatgacggtaat 130
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gaacttctggattcagggcctgcatatggacagggtggttaccaatgggatgacggtaat 120

            
Query: 131 a 131
           |
Sbjct: 121 a 121


>mdm-MIR7121d_MI0023147_121
          Length = 121

 Score =  240 bits (121), Expect = 9e-65
 Identities = 121/121 (100%)
 Strand = Plus / Plus

                                                                       
Query: 11  tattaccctcatcctcttggtgatcgccctgccccacccatatggccttctgaattcagg 70
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tattaccctcatcctcttggtgatcgccctgccccacccatatggccttctgaattcagg 60

                                                                       
Query: 71  gaacttctggattcagggcctgcatatggacagggtggttaccaatgggatgacggtaat 130
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gaacttctggattcagggcctgcatatggacagggtggttaccaatgggatgacggtaat 120

            
Query: 131 a 131
           |
Sbjct: 121 a 121


>mdm-MIR7121g_MI0023150_100
          Length = 100

 Score = 99.6 bits (50), Expect = 2e-22
 Identities = 56/58 (96%)
 Strand = Plus / Plus

                                                                     
Query: 74  cttctggattcagggcctgcatatggacagggtggttaccaatgggatgacggtaata 131
           |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 43  cttctgaattcagggcctgcatatcgacagggtggttaccaatgggatgacggtaata 100



 Score = 71.9 bits (36), Expect = 5e-14
 Identities = 55/61 (90%), Gaps = 4/61 (6%)
 Strand = Plus / Plus

                                                                      
Query: 11 tattaccctcatcctcttggtgatcgccctgccccacccatatggccttctgaattcagg 70
          |||||||||| |||||||||||||||||||||    ||||||||| ||||||||||||||
Sbjct: 1  tattaccctcctcctcttggtgatcgccctgc----cccatatggtcttctgaattcagg 56

           
Query: 71 g 71
          |
Sbjct: 57 g 57


>mdm-MIR7121c_MI0023146_135
          Length = 135

 Score = 83.8 bits (42), Expect = 1e-17
 Identities = 54/58 (93%)
 Strand = Plus / Plus

                                                                     
Query: 74  cttctggattcagggcctgcatatggacagggtggttaccaatgggatgacggtaata 131
           ||||||||||||||| |||||||||||||||||| ||||||| | |||||||||||||
Sbjct: 78  cttctggattcagggtctgcatatggacagggtgattaccaaggtgatgacggtaata 135



 Score = 54.0 bits (27), Expect = 1e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 74  cttctggattcagggcctgcatatggacagg 104
           ||||||||||||||| |||||||||||||||
Sbjct: 43  cttctggattcagggtctgcatatggacagg 73



 Score = 48.1 bits (24), Expect = 7e-07
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                              
Query: 11 tattaccctcatcctcttggtgatcgccctgcccca 46
          ||||||| || |||||||||||||||||||| ||||
Sbjct: 1  tattaccatcktcctcttggtgatcgccctgtccca 36


>mdm-MIR7121f_MI0023149_88
          Length = 88

 Score = 67.9 bits (34), Expect = 7e-13
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                             
Query: 69  gggaacttctggattcagggcctgcatatggaca 102
           ||||||||||||||||||||||||||||||||||
Sbjct: 37  gggaacttctggattcagggcctgcatatggaca 70


>mdm-MIR7121a_MI0023144_132
          Length = 132

 Score = 63.9 bits (32), Expect = 1e-11
 Identities = 60/69 (86%), Gaps = 4/69 (5%)
 Strand = Plus / Plus

                                                                      
Query: 3  aatactactattaccctcatcctcttggtgatcgccctgccccacccatatggccttctg 62
          |||| |||||||||| || ||||||||||||||||||||     ||||||||||||||||
Sbjct: 12 aatattactattaccatcctcctcttggtgatcgccctg----tcccatatggccttctg 67

                   
Query: 63 aattcaggg 71
           ||||||||
Sbjct: 68 gattcaggg 76



 Score = 60.0 bits (30), Expect = 2e-10
 Identities = 56/65 (86%), Gaps = 6/65 (9%)
 Strand = Plus / Plus

                                                                       
Query: 74  cttctggattcagggcctgcatatggacagggtggttaccaatgggatgacggtaatatt 133
           |||||||||||||||||||||      ||||||| ||| ||| |||||||||||||||||
Sbjct: 62  cttctggattcagggcctgca------cagggtgattaacaaagggatgacggtaatatt 115

                
Query: 134 taatt 138
           |||||
Sbjct: 116 taatt 120


>mdm-MIR7121b_MI0023145_172
          Length = 172

 Score = 61.9 bits (31), Expect = 5e-11
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 100 acagggtggttaccaatgggatgacggtaatatttaatt 138
           |||||||| ||||||| ||||||||||||||||||||||
Sbjct: 102 acagggtgattaccaaagggatgacggtaatatttaatt 140



 Score = 54.0 bits (27), Expect = 1e-08
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                 
Query: 3  aatactactattaccctcatcctcttggtgatcgccctg 41
          |||| |||||||||| || ||||||||||||||||||||
Sbjct: 33 aatattactattaccatcctcctcttggtgatcgccctg 71


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.