(261 letters)

Database: hairpin_length.fa 
           18,432 sequences; 1,887,117 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mdm-MIR7121c_MI0023146_135                                            264   8e-72
mdm-MIR7121a_MI0023144_132                                            115   6e-27
mdm-MIR7121b_MI0023145_172                                             94   2e-20
mdm-MIR7121e_MI0023148_121                                             84   2e-17
mdm-MIR7121h_MI0023151_121                                             84   2e-17
mdm-MIR7121d_MI0023147_121                                             84   2e-17
mdm-MIR7121g_MI0023150_100                                             82   8e-17
mdm-MIR7121f_MI0023149_88                                              52   8e-08

>mdm-MIR7121c_MI0023146_135
          Length = 135

 Score =  264 bits (133), Expect = 8e-72
 Identities = 135/135 (100%)
 Strand = Plus / Plus

                                                                       
Query: 21  tattaccatcktcctcttggtgatcgccctgtcccatatgtccttctggattcagggtct 80
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tattaccatcktcctcttggtgatcgccctgtcccatatgtccttctggattcagggtct 60

                                                                       
Query: 81  gcatatggacaggtgtccttctggattcagggtctgcatatggacagggtgattaccaag 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gcatatggacaggtgtccttctggattcagggtctgcatatggacagggtgattaccaag 120

                          
Query: 141 gtgatgacggtaata 155
           |||||||||||||||
Sbjct: 121 gtgatgacggtaata 135



 Score = 76.0 bits (38), Expect = 5e-15
 Identities = 41/42 (97%)
 Strand = Plus / Plus

                                                     
Query: 201 ctgcatatggacagggtgattaccaaggggatgacggtaata 242
           |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 94  ctgcatatggacagggtgattaccaaggtgatgacggtaata 135


>mdm-MIR7121a_MI0023144_132
          Length = 132

 Score =  115 bits (58), Expect = 6e-27
 Identities = 70/74 (94%)
 Strand = Plus / Plus

                                                                      
Query: 10 agaaagattactattaccatcktcctcttggtgatcgccctgtcccatatgtccttctgg 69
          ||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 9  agaaatattactattaccatcctcctcttggtgatcgccctgtcccatatggccttctgg 68

                        
Query: 70 attcagggtctgca 83
          |||||||| |||||
Sbjct: 69 attcagggcctgca 82



 Score = 85.9 bits (43), Expect = 5e-18
 Identities = 49/51 (96%)
 Strand = Plus / Plus

                                                              
Query: 211 acagggtgattaccaaggggatgacggtaatatttaattcatgatgttggc 261
           |||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 82  acagggtgattaacaaagggatgacggtaatatttaattcatgatgttggc 132



 Score = 60.1 bits (30), Expect = 3e-10
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 124 acagggtgattaccaaggtgatgacggtaatatttaattcat 165
           |||||||||||| ||| | |||||||||||||||||||||||
Sbjct: 82  acagggtgattaacaaagggatgacggtaatatttaattcat 123


>mdm-MIR7121b_MI0023145_172
          Length = 172

 Score = 93.9 bits (47), Expect = 2e-20
 Identities = 50/51 (98%)
 Strand = Plus / Plus

                                                              
Query: 211 acagggtgattaccaaggggatgacggtaatatttaattcatgatgttggc 261
           |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 102 acagggtgattaccaaagggatgacggtaatatttaattcatgatgttggc 152



 Score = 87.9 bits (44), Expect = 1e-18
 Identities = 63/68 (92%), Gaps = 1/68 (1%)
 Strand = Plus / Plus

                                                                      
Query: 10 agaaagattactattaccatcktcctcttggtgatcgccctgtcccatatgtccttctgg 69
          ||||| ||||||||||||||| |||||||||||||||||||||| ||||||  |||||||
Sbjct: 30 agaaatattactattaccatcctcctcttggtgatcgccctgtcgcatatg-gcttctgg 88

                  
Query: 70 attcaggg 77
          ||||||||
Sbjct: 89 attcaggg 96



 Score = 68.1 bits (34), Expect = 1e-12
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                     
Query: 124 acagggtgattaccaaggtgatgacggtaatatttaattcat 165
           |||||||||||||||| | |||||||||||||||||||||||
Sbjct: 102 acagggtgattaccaaagggatgacggtaatatttaattcat 143


>mdm-MIR7121e_MI0023148_121
          Length = 121

 Score = 84.0 bits (42), Expect = 2e-17
 Identities = 54/58 (93%)
 Strand = Plus / Plus

                                                                     
Query: 98  cttctggattcagggtctgcatatggacagggtgattaccaaggtgatgacggtaata 155
           ||||||||||||||| |||||||||||||||||| ||||||| | |||||||||||||
Sbjct: 64  cttctggattcagggcctgcatatggacagggtggttaccaatgggatgacggtaata 121



 Score = 74.0 bits (37), Expect = 2e-14
 Identities = 43/45 (95%)
 Strand = Plus / Plus

                                                        
Query: 198 ggcctgcatatggacagggtgattaccaaggggatgacggtaata 242
           ||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 77  ggcctgcatatggacagggtggttaccaatgggatgacggtaata 121



 Score = 54.2 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 63 cttctggattcagggtctgcatatggacagg 93
          ||||||||||||||| |||||||||||||||
Sbjct: 64 cttctggattcagggcctgcatatggacagg 94



 Score = 48.2 bits (24), Expect = 1e-06
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                              
Query: 21 tattaccatcktcctcttggtgatcgccctgtccca 56
          ||||||| || |||||||||||||||||||| ||||
Sbjct: 1  tattaccctcatcctcttggtgatcgccctgcccca 36


>mdm-MIR7121h_MI0023151_121
          Length = 121

 Score = 84.0 bits (42), Expect = 2e-17
 Identities = 54/58 (93%)
 Strand = Plus / Plus

                                                                     
Query: 98  cttctggattcagggtctgcatatggacagggtgattaccaaggtgatgacggtaata 155
           ||||||||||||||| |||||||||||||||||| ||||||| | |||||||||||||
Sbjct: 64  cttctggattcagggcctgcatatggacagggtggttaccaatgggatgacggtaata 121



 Score = 74.0 bits (37), Expect = 2e-14
 Identities = 43/45 (95%)
 Strand = Plus / Plus

                                                        
Query: 198 ggcctgcatatggacagggtgattaccaaggggatgacggtaata 242
           ||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 77  ggcctgcatatggacagggtggttaccaatgggatgacggtaata 121



 Score = 54.2 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 63 cttctggattcagggtctgcatatggacagg 93
          ||||||||||||||| |||||||||||||||
Sbjct: 64 cttctggattcagggcctgcatatggacagg 94



 Score = 48.2 bits (24), Expect = 1e-06
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                              
Query: 21 tattaccatcktcctcttggtgatcgccctgtccca 56
          ||||||| || |||||||||||||||||||| ||||
Sbjct: 1  tattaccctcatcctcttggtgatcgccctgcccca 36


>mdm-MIR7121d_MI0023147_121
          Length = 121

 Score = 84.0 bits (42), Expect = 2e-17
 Identities = 54/58 (93%)
 Strand = Plus / Plus

                                                                     
Query: 98  cttctggattcagggtctgcatatggacagggtgattaccaaggtgatgacggtaata 155
           ||||||||||||||| |||||||||||||||||| ||||||| | |||||||||||||
Sbjct: 64  cttctggattcagggcctgcatatggacagggtggttaccaatgggatgacggtaata 121



 Score = 74.0 bits (37), Expect = 2e-14
 Identities = 43/45 (95%)
 Strand = Plus / Plus

                                                        
Query: 198 ggcctgcatatggacagggtgattaccaaggggatgacggtaata 242
           ||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 77  ggcctgcatatggacagggtggttaccaatgggatgacggtaata 121



 Score = 54.2 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 63 cttctggattcagggtctgcatatggacagg 93
          ||||||||||||||| |||||||||||||||
Sbjct: 64 cttctggattcagggcctgcatatggacagg 94



 Score = 48.2 bits (24), Expect = 1e-06
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                              
Query: 21 tattaccatcktcctcttggtgatcgccctgtccca 56
          ||||||| || |||||||||||||||||||| ||||
Sbjct: 1  tattaccctcatcctcttggtgatcgccctgcccca 36


>mdm-MIR7121g_MI0023150_100
          Length = 100

 Score = 82.0 bits (41), Expect = 8e-17
 Identities = 65/73 (89%)
 Strand = Plus / Plus

                                                                      
Query: 21 tattaccatcktcctcttggtgatcgccctgtcccatatgtccttctggattcagggtct 80
          ||||||| || |||||||||||||||||||| ||||||||  |||||| |||||||| ||
Sbjct: 1  tattaccctcctcctcttggtgatcgccctgccccatatggtcttctgaattcagggcct 60

                       
Query: 81 gcatatggacagg 93
          |||||| ||||||
Sbjct: 61 gcatatcgacagg 73



 Score = 68.1 bits (34), Expect = 1e-12
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                     
Query: 98  cttctggattcagggtctgcatatggacagggtgattaccaaggtgatgacggtaata 155
           |||||| |||||||| |||||||| ||||||||| ||||||| | |||||||||||||
Sbjct: 43  cttctgaattcagggcctgcatatcgacagggtggttaccaatgggatgacggtaata 100



 Score = 66.1 bits (33), Expect = 5e-12
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                        
Query: 198 ggcctgcatatggacagggtgattaccaaggggatgacggtaata 242
           ||||||||||| ||||||||| ||||||| |||||||||||||||
Sbjct: 56  ggcctgcatatcgacagggtggttaccaatgggatgacggtaata 100


>mdm-MIR7121f_MI0023149_88
          Length = 88

 Score = 52.2 bits (26), Expect = 8e-08
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 98  cttctggattcagggtctgcatatggacagggtgatta 135
           ||||||||||||||| ||||||||||||| || |||||
Sbjct: 42  cttctggattcagggcctgcatatggacatggcgatta 79



 Score = 50.2 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 63 cttctggattcagggtctgcatatggaca 91
          ||||||||||||||| |||||||||||||
Sbjct: 42 cttctggattcagggcctgcatatggaca 70



 Score = 40.2 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 32 tcctcttggtgatcgccctg 51
          ||||||||||||||||||||
Sbjct: 1  tcctcttggtgatcgccctg 20


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.