(192 letters)

Database: hairpin_length.fa 
           18,432 sequences; 1,887,117 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mdm-MIR7121b_MI0023145_172                                            341   5e-95
mdm-MIR7121a_MI0023144_132                                            222   3e-59
mdm-MIR7121g_MI0023150_100                                             82   7e-17
mdm-MIR7121c_MI0023146_135                                             74   2e-14
mdm-MIR7121e_MI0023148_121                                             48   1e-06
mdm-MIR7121h_MI0023151_121                                             48   1e-06
mdm-MIR7121d_MI0023147_121                                             48   1e-06
mdm-MIR7121f_MI0023149_88                                              40   2e-04

>mdm-MIR7121b_MI0023145_172
          Length = 172

 Score =  341 bits (172), Expect = 5e-95
 Identities = 172/172 (100%)
 Strand = Plus / Plus

                                                                       
Query: 11  caattcccagacctgaccggagccgccgtagaaatattactattaccatcctcctcttgg 70
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   caattcccagacctgaccggagccgccgtagaaatattactattaccatcctcctcttgg 60

                                                                       
Query: 71  tgatcgccctgtcgcatatggcttctggattcagggcctgtacagggtgattaccaaagg 130
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tgatcgccctgtcgcatatggcttctggattcagggcctgtacagggtgattaccaaagg 120

                                                               
Query: 131 gatgacggtaatatttaattcatgatgttggcaaactcgtcggagggaaatg 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatgacggtaatatttaattcatgatgttggcaaactcgtcggagggaaatg 172


>mdm-MIR7121a_MI0023144_132
          Length = 132

 Score =  222 bits (112), Expect = 3e-59
 Identities = 128/132 (96%), Gaps = 1/132 (0%)
 Strand = Plus / Plus

                                                                       
Query: 32  gccgccgtagaaatattactattaccatcctcctcttggtgatcgccctgtcgcatatgg 91
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1   gccgccgtagaaatattactattaccatcctcctcttggtgatcgccctgtcccatatgg 60

                                                                       
Query: 92  c-ttctggattcagggcctgtacagggtgattaccaaagggatgacggtaatatttaatt 150
           | |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 61  ccttctggattcagggcctgcacagggtgattaacaaagggatgacggtaatatttaatt 120

                       
Query: 151 catgatgttggc 162
           ||||||||||||
Sbjct: 121 catgatgttggc 132


>mdm-MIR7121g_MI0023150_100
          Length = 100

 Score = 81.8 bits (41), Expect = 7e-17
 Identities = 86/100 (86%), Gaps = 7/100 (7%)
 Strand = Plus / Plus

                                                                       
Query: 51  tattaccatcctcctcttggtgatcgccctgtcgcatatgg-cttctggattcagggcct 109
           ||||||| ||||||||||||||||||||||| | ||||||| |||||| |||||||||||
Sbjct: 1   tattaccctcctcctcttggtgatcgccctgccccatatggtcttctgaattcagggcct 60

                                                   
Query: 110 g------tacagggtgattaccaaagggatgacggtaata 143
           |       |||||||| ||||||| |||||||||||||||
Sbjct: 61  gcatatcgacagggtggttaccaatgggatgacggtaata 100


>mdm-MIR7121c_MI0023146_135
          Length = 135

 Score = 73.8 bits (37), Expect = 2e-14
 Identities = 53/57 (92%), Gaps = 1/57 (1%)
 Strand = Plus / Plus

                                                                    
Query: 51  tattaccatcctcctcttggtgatcgccctgtcgcatatg-gcttctggattcaggg 106
           |||||||||| |||||||||||||||||||||| ||||||  |||||||||||||||
Sbjct: 1   tattaccatcktcctcttggtgatcgccctgtcccatatgtccttctggattcaggg 57



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 112 acagggtgattaccaaagggatgacggtaata 143
           |||||||||||||||| | |||||||||||||
Sbjct: 104 acagggtgattaccaaggtgatgacggtaata 135


>mdm-MIR7121e_MI0023148_121
          Length = 121

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 112 acagggtgattaccaaagggatgacggtaata 143
           |||||||| ||||||| |||||||||||||||
Sbjct: 90  acagggtggttaccaatgggatgacggtaata 121



 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 51 tattaccatcctcctcttggtgatcgccctg 81
          ||||||| || ||||||||||||||||||||
Sbjct: 1  tattaccctcatcctcttggtgatcgccctg 31


>mdm-MIR7121h_MI0023151_121
          Length = 121

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 112 acagggtgattaccaaagggatgacggtaata 143
           |||||||| ||||||| |||||||||||||||
Sbjct: 90  acagggtggttaccaatgggatgacggtaata 121



 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 51 tattaccatcctcctcttggtgatcgccctg 81
          ||||||| || ||||||||||||||||||||
Sbjct: 1  tattaccctcatcctcttggtgatcgccctg 31


>mdm-MIR7121d_MI0023147_121
          Length = 121

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 112 acagggtgattaccaaagggatgacggtaata 143
           |||||||| ||||||| |||||||||||||||
Sbjct: 90  acagggtggttaccaatgggatgacggtaata 121



 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 51 tattaccatcctcctcttggtgatcgccctg 81
          ||||||| || ||||||||||||||||||||
Sbjct: 1  tattaccctcatcctcttggtgatcgccctg 31


>mdm-MIR7121f_MI0023149_88
          Length = 88

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 62 tcctcttggtgatcgccctg 81
          ||||||||||||||||||||
Sbjct: 1  tcctcttggtgatcgccctg 20



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 92  cttctggattcagggcctg 110
           |||||||||||||||||||
Sbjct: 42  cttctggattcagggcctg 60


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.