(153 letters)

Database: hairpin_length.fa 
           18,432 sequences; 1,887,117 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mdm-MIR7121a_MI0023144_132                                            262   3e-71
mdm-MIR7121b_MI0023145_172                                            252   3e-68
mdm-MIR7121c_MI0023146_135                                            101   6e-23
mdm-MIR7121g_MI0023150_100                                             98   9e-22
mdm-MIR7121e_MI0023148_121                                             56   3e-09
mdm-MIR7121h_MI0023151_121                                             56   3e-09
mdm-MIR7121d_MI0023147_121                                             56   3e-09
mdm-MIR7121f_MI0023149_88                                              42   5e-05

>mdm-MIR7121a_MI0023144_132
          Length = 132

 Score =  262 bits (132), Expect = 3e-71
 Identities = 132/132 (100%)
 Strand = Plus / Plus

                                                                       
Query: 12  gccgccgtagaaatattactattaccatcctcctcttggtgatcgccctgtcccatatgg 71
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gccgccgtagaaatattactattaccatcctcctcttggtgatcgccctgtcccatatgg 60

                                                                       
Query: 72  ccttctggattcagggcctgcacagggtgattaacaaagggatgacggtaatatttaatt 131
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ccttctggattcagggcctgcacagggtgattaacaaagggatgacggtaatatttaatt 120

                       
Query: 132 catgatgttggc 143
           ||||||||||||
Sbjct: 121 catgatgttggc 132


>mdm-MIR7121b_MI0023145_172
          Length = 172

 Score =  252 bits (127), Expect = 3e-68
 Identities = 143/147 (97%), Gaps = 1/147 (0%)
 Strand = Plus / Plus

                                                                       
Query: 7   ccggagccgccgtagaaatattactattaccatcctcctcttggtgatcgccctgtccca 66
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 17  ccggagccgccgtagaaatattactattaccatcctcctcttggtgatcgccctgtcgca 76

                                                                       
Query: 67  tatggccttctggattcagggcctgcacagggtgattaacaaagggatgacggtaatatt 126
           |||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 77  tatggc-ttctggattcagggcctgtacagggtgattaccaaagggatgacggtaatatt 135

                                      
Query: 127 taattcatgatgttggcaaactcgtcg 153
           |||||||||||||||||||||||||||
Sbjct: 136 taattcatgatgttggcaaactcgtcg 162


>mdm-MIR7121c_MI0023146_135
          Length = 135

 Score =  101 bits (51), Expect = 6e-23
 Identities = 60/63 (95%)
 Strand = Plus / Plus

                                                                      
Query: 31 tattaccatcctcctcttggtgatcgccctgtcccatatggccttctggattcagggcct 90
          |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 1  tattaccatcktcctcttggtgatcgccctgtcccatatgtccttctggattcagggtct 60

             
Query: 91 gca 93
          |||
Sbjct: 61 gca 63



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 93  acagggtgattaacaaagggatgacggtaata 124
           |||||||||||| ||| | |||||||||||||
Sbjct: 104 acagggtgattaccaaggtgatgacggtaata 135


>mdm-MIR7121g_MI0023150_100
          Length = 100

 Score = 97.6 bits (49), Expect = 9e-22
 Identities = 87/100 (87%), Gaps = 6/100 (6%)
 Strand = Plus / Plus

                                                                       
Query: 31  tattaccatcctcctcttggtgatcgccctgtcccatatggccttctggattcagggcct 90
           ||||||| ||||||||||||||||||||||| ||||||||| |||||| |||||||||||
Sbjct: 1   tattaccctcctcctcttggtgatcgccctgccccatatggtcttctgaattcagggcct 60

                                                   
Query: 91  gc------acagggtgattaacaaagggatgacggtaata 124
           ||      |||||||| ||| ||| |||||||||||||||
Sbjct: 61  gcatatcgacagggtggttaccaatgggatgacggtaata 100


>mdm-MIR7121e_MI0023148_121
          Length = 121

 Score = 56.0 bits (28), Expect = 3e-09
 Identities = 53/61 (86%), Gaps = 4/61 (6%)
 Strand = Plus / Plus

                                                                      
Query: 31 tattaccatcctcctcttggtgatcgccctg----tcccatatggccttctggattcagg 86
          ||||||| || ||||||||||||||||||||     |||||||||||||||| |||||||
Sbjct: 1  tattaccctcatcctcttggtgatcgccctgccccacccatatggccttctgaattcagg 60

           
Query: 87 g 87
          |
Sbjct: 61 g 61



 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 49/58 (84%), Gaps = 6/58 (10%)
 Strand = Plus / Plus

                                                                     
Query: 73  cttctggattcagggcctgc------acagggtgattaacaaagggatgacggtaata 124
           ||||||||||||||||||||      |||||||| ||| ||| |||||||||||||||
Sbjct: 64  cttctggattcagggcctgcatatggacagggtggttaccaatgggatgacggtaata 121


>mdm-MIR7121h_MI0023151_121
          Length = 121

 Score = 56.0 bits (28), Expect = 3e-09
 Identities = 53/61 (86%), Gaps = 4/61 (6%)
 Strand = Plus / Plus

                                                                      
Query: 31 tattaccatcctcctcttggtgatcgccctg----tcccatatggccttctggattcagg 86
          ||||||| || ||||||||||||||||||||     |||||||||||||||| |||||||
Sbjct: 1  tattaccctcatcctcttggtgatcgccctgccccacccatatggccttctgaattcagg 60

           
Query: 87 g 87
          |
Sbjct: 61 g 61



 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 49/58 (84%), Gaps = 6/58 (10%)
 Strand = Plus / Plus

                                                                     
Query: 73  cttctggattcagggcctgc------acagggtgattaacaaagggatgacggtaata 124
           ||||||||||||||||||||      |||||||| ||| ||| |||||||||||||||
Sbjct: 64  cttctggattcagggcctgcatatggacagggtggttaccaatgggatgacggtaata 121


>mdm-MIR7121d_MI0023147_121
          Length = 121

 Score = 56.0 bits (28), Expect = 3e-09
 Identities = 53/61 (86%), Gaps = 4/61 (6%)
 Strand = Plus / Plus

                                                                      
Query: 31 tattaccatcctcctcttggtgatcgccctg----tcccatatggccttctggattcagg 86
          ||||||| || ||||||||||||||||||||     |||||||||||||||| |||||||
Sbjct: 1  tattaccctcatcctcttggtgatcgccctgccccacccatatggccttctgaattcagg 60

           
Query: 87 g 87
          |
Sbjct: 61 g 61



 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 49/58 (84%), Gaps = 6/58 (10%)
 Strand = Plus / Plus

                                                                     
Query: 73  cttctggattcagggcctgc------acagggtgattaacaaagggatgacggtaata 124
           ||||||||||||||||||||      |||||||| ||| ||| |||||||||||||||
Sbjct: 64  cttctggattcagggcctgcatatggacagggtggttaccaatgggatgacggtaata 121


>mdm-MIR7121f_MI0023149_88
          Length = 88

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 73 cttctggattcagggcctgca 93
          |||||||||||||||||||||
Sbjct: 42 cttctggattcagggcctgca 62



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 42 tcctcttggtgatcgccctg 61
          ||||||||||||||||||||
Sbjct: 1  tcctcttggtgatcgccctg 20


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.