(106 letters)

Database: hairpin_length.fa 
           18,432 sequences; 1,887,117 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mdm-MIR156o_MI0022985_95                                              188   2e-49
mdm-MIR156m_MI0022983_113                                             180   5e-47
mdm-MIR156g_MI0022977_94                                              149   2e-37
mdm-MIR156i_MI0022979_89                                              147   7e-37
mdm-MIR156b_MI0022972_85                                              141   5e-35
tcc-MIR156b_MI0017454_Theobroma_cacao_miR156b_stem-loop_129           107   6e-25
vvi-MIR156c_MI0006487_Vitis_vinifera_miR156c_stem-loop_104            105   3e-24
rco-MIR156c_MI0013372_Ricinus_communis_miR156c_stem-loop_94           101   4e-23
ptc-MIR156d_MI0002187_Populus_trichocarpa_miR156d_stem-loop_101        96   2e-21
ghr-MIR156a_MI0005638_Gossypium_hirsutum_miR156a_stem-loop_104         92   4e-20
ghr-MIR156b_MI0005639_Gossypium_hirsutum_miR156b_stem-loop_113         92   4e-20
ptc-MIR156b_MI0002185_Populus_trichocarpa_miR156b_stem-loop_101        92   4e-20
mtr-MIR156c_MI0005584_Medicago_truncatula_miR156c_stem-loop_98         88   6e-19
aly-MIR156f_MI0014507_Arabidopsis_lyrata_miR156f_stem-loop_228         82   4e-17
mtr-MIR156b_MI0005571_Medicago_truncatula_miR156b_stem-loop_95         82   4e-17
ath-MIR156e_MI0000182_Arabidopsis_thaliana_miR156e_stem-loop_107       76   2e-15
aly-MIR156e_MI0014506_Arabidopsis_lyrata_miR156e_stem-loop_150         72   4e-14
vvi-MIR156e_MI0006489_Vitis_vinifera_miR156e_stem-loop_108             68   5e-13
osa-MIR156c_MI0000655_Oryza_sativa_miR156c_stem-loop_149               64   9e-12
tcc-MIR156d_MI0017456_Theobroma_cacao_miR156d_stem-loop_125            62   3e-11
osa-MIR156b_MI0000654_Oryza_sativa_miR156b_stem-loop_176               60   1e-10
rco-MIR156a_MI0013370_Ricinus_communis_miR156a_stem-loop_97            58   5e-10
ath-MIR156f_MI0000183_Arabidopsis_thaliana_miR156f_stem-loop_132       58   5e-10
zma-MIR156c_MI0001460_Zea_mays_miR156c_stem-loop_139                   54   8e-09
ssp-MIR156_MI0018191_Saccharum_ssp._miR156_stem-loop_543               54   8e-09
sof-MIR156_MI0001754_Saccharum_officinarum_miR156_stem-loop_137        54   8e-09
sbi-MIR156c_MI0001505_Sorghum_bicolor_miR156c_stem-loop_95             54   8e-09
aly-MIR156g_MI0014508_Arabidopsis_lyrata_miR156g_stem-loop_138         52   3e-08
zma-MIR156h_MI0001463_Zea_mays_miR156h_stem-loop_115                   50   1e-07
zma-MIR156i_MI0001464_Zea_mays_miR156i_stem-loop_117                   50   1e-07
ath-MIR156g_MI0001082_Arabidopsis_thaliana_miR156g_stem-loop_103       50   1e-07
bdi-MIR156b_MI0018104_Brachypodium_distachyon_miR156b_stem-loop_205    50   1e-07
bdi-MIR156d_MI0018122_Brachypodium_distachyon_miR156d_stem-loop_151    50   1e-07
zma-MIR156e_MI0001461_Zea_mays_miR156e_stem-loop_126                   50   1e-07
osa-MIR156a_MI0000653_Oryza_sativa_miR156a_stem-loop_100               50   1e-07
mdm-MIR156l_MI0022982_257                                              48   5e-07
mdm-MIR156d_MI0022974_124                                              48   5e-07
osa-MIR156e_MI0000657_Oryza_sativa_miR156e_stem-loop_104               48   5e-07
osa-MIR156i_MI0000661_Oryza_sativa_miR156i_stem-loop_90                48   5e-07
gma-MIR156h_MI0017819_Glycine_max_miR156h_stem-loop_90                 46   2e-06
osa-MIR156f_MI0000658_Oryza_sativa_miR156f_stem-loop_186               46   2e-06
aly-MIR156d_MI0014505_Arabidopsis_lyrata_miR156d_stem-loop_118         46   2e-06
ptc-MIR156f_MI0002189_Populus_trichocarpa_miR156f_stem-loop_101        46   2e-06
aly-MIR156c_MI0014504_Arabidopsis_lyrata_miR156c_stem-loop_102         46   2e-06
tae-MIR156_MI0016450_Triticum_aestivum_miR156_stem-loop_278            46   2e-06
mdm-MIR156h_MI0022978_94                                               46   2e-06
ath-MIR156a_MI0000178_Arabidopsis_thaliana_miR156a_stem-loop_123       46   2e-06
vun-MIR156a_MI0019565_Vigna_unguiculata_miR156a_stem-loop_94           46   2e-06
mdm-MIR156n_MI0022984_137                                              46   2e-06
rco-MIR156b_MI0013371_Ricinus_communis_miR156b_stem-loop_92            46   2e-06
mdm-MIR156j_MI0022980_88                                               46   2e-06
ptc-MIR156a_MI0002184_Populus_trichocarpa_miR156a_stem-loop_101        46   2e-06
mdm-MIR156ae_MI0023001_114                                             46   2e-06
ath-MIR156d_MI0000181_Arabidopsis_thaliana_miR156d_stem-loop_118       46   2e-06
ptc-MIR156c_MI0002186_Populus_trichocarpa_miR156c_stem-loop_100        46   2e-06
ptc-MIR156e_MI0002188_Populus_trichocarpa_miR156e_stem-loop_100        46   2e-06
mdm-MIR156a_MI0022971_90                                               46   2e-06
zma-MIR156b_MI0001459_Zea_mays_miR156b_stem-loop_124                   46   2e-06
sbi-MIR156b_MI0001506_Sorghum_bicolor_miR156b_stem-loop_84             46   2e-06
ath-MIR156c_MI0000180_Arabidopsis_thaliana_miR156c_stem-loop_104       46   2e-06
mdm-MIR156f_MI0022976_210                                              46   2e-06
zma-MIR156a_MI0001462_Zea_mays_miR156a_stem-loop_152                   46   2e-06
gma-MIR156k_MI0018652_Glycine_max_miR156k_stem-loop_92                 46   2e-06
aly-MIR156a_MI0014502_Arabidopsis_lyrata_miR156a_stem-loop_184         46   2e-06
vvi-MIR156b_MI0006486_Vitis_vinifera_miR156b_stem-loop_102             46   2e-06
hvu-MIR156_MI0016449_Hordeum_vulgare_miR156_stem-loop_135              46   2e-06
sbi-MIR156i_MI0010863_Sorghum_bicolor_miR156i_stem-loop_121            46   2e-06
zma-MIR156l_MI0013184_Zea_mays_miR156l_stem-loop_90                    46   2e-06
tcc-MIR156g_MI0017459_Theobroma_cacao_miR156g_stem-loop_120            46   2e-06
bna-MIR156a_MI0005770_Brassica_napus_miR156a_stem-loop_82              46   2e-06
osa-MIR156g_MI0000659_Oryza_sativa_miR156g_stem-loop_116               46   2e-06
mdm-MIR156e_MI0022975_90                                               46   2e-06
sbi-MIR156h_MI0010862_Sorghum_bicolor_miR156h_stem-loop_94             46   2e-06
mdm-MIR156ad_MI0023000_114                                             46   2e-06
sbi-MIR156g_MI0010861_Sorghum_bicolor_miR156g_stem-loop_89             46   2e-06
mdm-MIR156c_MI0022973_94                                               46   2e-06
ssl-MIR156_MI0019340_Salvia_sclarea_miR156_stem-loop_82                44   8e-06
zma-MIR156d_MI0001456_Zea_mays_miR156d_stem-loop_119                   44   8e-06
rco-MIR156d_MI0013373_Ricinus_communis_miR156d_stem-loop_93            44   8e-06
ctr-MIR156_MI0013293_Citrus_trifoliata_miR156_stem-loop_190            44   8e-06
osa-MIR156h_MI0000660_Oryza_sativa_miR156h_stem-loop_101               44   8e-06
ppt-MIR156c_MI0005654_Physcomitrella_patens_miR156c_stem-loop_95       44   8e-06
csi-MIR156_MI0016691_Citrus_sinensis_miR156_stem-loop_103              44   8e-06
tcc-MIR156c_MI0017455_Theobroma_cacao_miR156c_stem-loop_121            44   8e-06
sbi-MIR156a_MI0001504_Sorghum_bicolor_miR156a_stem-loop_84             44   8e-06
ghr-MIR156c_MI0005640_Gossypium_hirsutum_miR156c_stem-loop_97          44   8e-06
bdi-MIR156c_MI0018109_Brachypodium_distachyon_miR156c_stem-loop_146    44   8e-06
osa-MIR156d_MI0000656_Oryza_sativa_miR156d_stem-loop_129               44   8e-06
ghr-MIR156d_MI0005641_Gossypium_hirsutum_miR156d_stem-loop_96          44   8e-06
ppt-MIR156a_MI0003506_Physcomitrella_patens_miR156a_stem-loop_115      44   8e-06
osa-MIR156j_MI0000662_Oryza_sativa_miR156j_stem-loop_165               44   8e-06
vvi-MIR156d_MI0006488_Vitis_vinifera_miR156d_stem-loop_103             42   3e-05
gma-MIR156o_MI0018656_Glycine_max_miR156o_stem-loop_90                 42   3e-05
mdm-MIR156k_MI0022981_145                                              42   3e-05
mtr-MIR156d_MI0005585_Medicago_truncatula_miR156d_stem-loop_90         42   3e-05
ath-MIR156b_MI0000179_Arabidopsis_thaliana_miR156b_stem-loop_183       42   3e-05
mtr-MIR156i_MI0005626_Medicago_truncatula_miR156i_stem-loop_93         42   3e-05
gma-MIR156a_MI0001784_Glycine_max_miR156a_stem-loop_122                42   3e-05
aly-MIR156b_MI0014503_Arabidopsis_lyrata_miR156b_stem-loop_109         42   3e-05
gma-MIR156n_MI0018655_Glycine_max_miR156n_stem-loop_89                 42   3e-05
smo-MIR156a_MI0006046_Selaginella_moellendorffii_miR156a_stem-lo...    42   3e-05
ppt-MIR156b_MI0005696_Physcomitrella_patens_miR156b_stem-loop_220      42   3e-05
zma-MIR156g_MI0001458_Zea_mays_miR156g_stem-loop_121                   40   1e-04
zma-MIR156f_MI0001457_Zea_mays_miR156f_stem-loop_167                   40   1e-04
sbi-MIR156f_MI0010860_Sorghum_bicolor_miR156f_stem-loop_128            40   1e-04

>mdm-MIR156o_MI0022985_95
          Length = 95

 Score =  188 bits (95), Expect = 2e-49
 Identities = 95/95 (100%)
 Strand = Plus / Plus

                                                                       
Query: 7   gacggtgacagaagagagtgagcacacatggtattttcttgcatgctgggttcatgcttg 66
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gacggtgacagaagagagtgagcacacatggtattttcttgcatgctgggttcatgcttg 60

                                              
Query: 67  aagctttgcgtgcttactctctatctgtcaccatc 101
           |||||||||||||||||||||||||||||||||||
Sbjct: 61  aagctttgcgtgcttactctctatctgtcaccatc 95


>mdm-MIR156m_MI0022983_113
          Length = 113

 Score =  180 bits (91), Expect = 5e-47
 Identities = 94/95 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  gtaaaggacggtgacagaagagagtgagcacacatggtattttcttgcatgctgggttca 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4  gtaaaggacggtgacagaagagagtgagcacacatggtattttcttgcatgctgggttca 63

                                             
Query: 61 tgcttgaagctttgcgtgcttactctctatctgtc 95
          |||||||||||||| ||||||||||||||||||||
Sbjct: 64 tgcttgaagctttgtgtgcttactctctatctgtc 98


>mdm-MIR156g_MI0022977_94
          Length = 94

 Score =  149 bits (75), Expect = 2e-37
 Identities = 84/87 (96%)
 Strand = Plus / Plus

                                                                      
Query: 9  cggtgacagaagagagtgagcacacatggtattttcttgcatgctgggttcatgcttgaa 68
          ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 3  cggtgacagaagagagtgagcacacatggtattttrttgcatgctgggttcatgctcgaa 62

                                     
Query: 69 gctttgcgtgcttactctctatctgtc 95
          |||||||||||||| ||||||||||||
Sbjct: 63 gctttgcgtgcttaatctctatctgtc 89


>mdm-MIR156i_MI0022979_89
          Length = 89

 Score =  147 bits (74), Expect = 7e-37
 Identities = 83/86 (96%)
 Strand = Plus / Plus

                                                                      
Query: 10 ggtgacagaagagagtgagcacacatggtattttcttgcatgctgggttcatgcttgaag 69
          |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 1  ggtgacagaagagagtgagcacacatggtattttrttgcatgctgggttcatgctcgaag 60

                                    
Query: 70 ctttgcgtgcttactctctatctgtc 95
          ||||||||||||| ||||||||||||
Sbjct: 61 ctttgcgtgcttaatctctatctgtc 86


>mdm-MIR156b_MI0022972_85
          Length = 85

 Score =  141 bits (71), Expect = 5e-35
 Identities = 81/85 (95%)
 Strand = Plus / Plus

                                                                      
Query: 12 tgacagaagagagtgagcacacatggtattttcttgcatgctgggttcatgcttgaagct 71
          |||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||
Sbjct: 1  tgacagaagagagtgagcacacatggtactttcttgcatgctgggttcatgytcgaagct 60

                                   
Query: 72 ttgcgtgcttactctctatctgtca 96
          ||||||||| |||||||||||||||
Sbjct: 61 ttgcgtgctcactctctatctgtca 85


>tcc-MIR156b_MI0017454_Theobroma_cacao_miR156b_stem-loop_129
          Length = 129

 Score =  107 bits (54), Expect = 6e-25
 Identities = 81/89 (91%), Gaps = 2/89 (2%)
 Strand = Plus / Plus

                                                                       
Query: 10  ggtgacagaagagagtgagcacacatggtattttcttgcatgctggg--ttcatgcttga 67
           ||||||||||||||||||||||||| |||  ||||||||||||| ||  |||||||||||
Sbjct: 19  ggtgacagaagagagtgagcacacagggtgctttcttgcatgcttggctttcatgcttga 78

                                        
Query: 68  agctttgcgtgcttactctctatctgtca 96
           |||| |||||||| |||||||||||||||
Sbjct: 79  agctctgcgtgctcactctctatctgtca 107


>vvi-MIR156c_MI0006487_Vitis_vinifera_miR156c_stem-loop_104
          Length = 104

 Score =  105 bits (53), Expect = 3e-24
 Identities = 79/87 (90%), Gaps = 3/87 (3%)
 Strand = Plus / Plus

                                                                      
Query: 10 ggtgacagaagagagtgagcacacatggtattttcttgcatgctgggttcatgcttgaag 69
          ||||||||||||||||||||||||||||| | ||||||||   ||||| |||||||||||
Sbjct: 9  ggtgacagaagagagtgagcacacatggtctgttcttgca---tgggtccatgcttgaag 65

                                     
Query: 70 ctttgcgtgcttactctctatctgtca 96
          || |||||||| |||||||||||||||
Sbjct: 66 ctctgcgtgctcactctctatctgtca 92


>rco-MIR156c_MI0013372_Ricinus_communis_miR156c_stem-loop_94
          Length = 94

 Score =  101 bits (51), Expect = 4e-23
 Identities = 80/89 (89%), Gaps = 3/89 (3%)
 Strand = Plus / Plus

                                                                      
Query: 10 ggtgacagaagagagtgagcacacatggtattttcttgcatgctgggttcatgcttgaag 69
          |||||||||||||||||||||||||||||| |||| ||||||     |||||||| ||||
Sbjct: 4  ggtgacagaagagagtgagcacacatggtactttcctgcatgaa---ttcatgctcgaag 60

                                       
Query: 70 ctttgcgtgcttactctctatctgtcacc 98
          | |||||||||||||||||||||||||||
Sbjct: 61 ccttgcgtgcttactctctatctgtcacc 89


>ptc-MIR156d_MI0002187_Populus_trichocarpa_miR156d_stem-loop_101
          Length = 101

 Score = 95.6 bits (48), Expect = 2e-21
 Identities = 78/87 (89%), Gaps = 2/87 (2%)
 Strand = Plus / Plus

                                                                      
Query: 12 tgacagaagagagtgagcacacatggtattttcttgcatgctgggttcatgcttgaagct 71
          ||||||||||||||||||||||| |||| |||||||||||    ||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacacagggtactttcttgcatg--acgttcatgcttgaagct 68

                                     
Query: 72 ttgcgtgcttactctctatctgtcacc 98
          ||||||||  || ||||||||||||||
Sbjct: 69 ttgcgtgcccaccctctatctgtcacc 95


>ghr-MIR156a_MI0005638_Gossypium_hirsutum_miR156a_stem-loop_104
          Length = 104

 Score = 91.7 bits (46), Expect = 4e-20
 Identities = 80/91 (87%), Gaps = 4/91 (4%)
 Strand = Plus / Plus

                                                                      
Query: 10 ggtgacagaagagagtgagcacacatggtattttcttgcatgctgg----gttcatgctt 65
          ||||||||||||||||||||||||| |||| ||||||||||||| |     |||||||||
Sbjct: 7  ggtgacagaagagagtgagcacacagggtactttcttgcatgcttgagcctttcatgctt 66

                                         
Query: 66 gaagctttgcgtgcttactctctatctgtca 96
          |||||| |||||||| || ||||||||||||
Sbjct: 67 gaagctctgcgtgctcaccctctatctgtca 97


>ghr-MIR156b_MI0005639_Gossypium_hirsutum_miR156b_stem-loop_113
          Length = 113

 Score = 91.7 bits (46), Expect = 4e-20
 Identities = 80/91 (87%), Gaps = 4/91 (4%)
 Strand = Plus / Plus

                                                                      
Query: 10 ggtgacagaagagagtgagcacacatggtattttcttgcatgctgg----gttcatgctt 65
          ||||||||||||||||||||||||| |||| ||||||||||||| |     |||||||||
Sbjct: 1  ggtgacagaagagagtgagcacacagggtactttcttgcatgcttgagcctttcatgctt 60

                                         
Query: 66 gaagctttgcgtgcttactctctatctgtca 96
          |||||| |||||||| || ||||||||||||
Sbjct: 61 gaagctctgcgtgctcaccctctatctgtca 91


>ptc-MIR156b_MI0002185_Populus_trichocarpa_miR156b_stem-loop_101
          Length = 101

 Score = 91.7 bits (46), Expect = 4e-20
 Identities = 79/89 (88%), Gaps = 2/89 (2%)
 Strand = Plus / Plus

                                                                      
Query: 10 ggtgacagaagagagtgagcacacatggtattttcttgcatgctgggttcatgcttgaag 69
          ||||||||||||||||||||||||| |||| |||||||||||     | |||||||||| 
Sbjct: 9  ggtgacagaagagagtgagcacacagggtactttcttgcatg--acatccatgcttgaaa 66

                                       
Query: 70 ctttgcgtgcttactctctatctgtcacc 98
          ||||||||||| |||||||||||||||||
Sbjct: 67 ctttgcgtgctcactctctatctgtcacc 95


>mtr-MIR156c_MI0005584_Medicago_truncatula_miR156c_stem-loop_98
          Length = 98

 Score = 87.7 bits (44), Expect = 6e-19
 Identities = 80/91 (87%), Gaps = 2/91 (2%)
 Strand = Plus / Plus

                                                                      
Query: 10 ggtgacagaagagagtgagcacacatggtattttcttgcatgct--gggttcatgcttga 67
          ||||||||||||||||||||||||||||| |||||||||| | |   | ||| |||||||
Sbjct: 4  ggtgacagaagagagtgagcacacatggtgttttcttgcacgattatgtttcctgcttga 63

                                         
Query: 68 agctttgcgtgcttactctctatctgtcacc 98
          |||| |  |||||||||||||||||||||||
Sbjct: 64 agctatatgtgcttactctctatctgtcacc 94


>aly-MIR156f_MI0014507_Arabidopsis_lyrata_miR156f_stem-loop_228
          Length = 228

 Score = 81.8 bits (41), Expect = 4e-17
 Identities = 82/94 (87%), Gaps = 5/94 (5%)
 Strand = Plus / Plus

                                                                       
Query: 10  ggtgacagaagagagtgagcacacatggtat-tttcttgcat----gctgggttcatgct 64
           |||||||||||||||||||||||||||||   ||||||||||    | ||| ||||||||
Sbjct: 66  ggtgacagaagagagtgagcacacatggtggctttcttgcatatttgatggtttcatgct 125

                                             
Query: 65  tgaagctttgcgtgcttactctctatctgtcacc 98
           ||||||| || ||||| |||||||||||||||||
Sbjct: 126 tgaagctatgtgtgctcactctctatctgtcacc 159



 Score = 38.2 bits (19), Expect = 5e-04
 Identities = 26/27 (96%), Gaps = 1/27 (3%)
 Strand = Plus / Minus

                                      
Query: 10  ggtgacaga-agagagtgagcacacat 35
           ||||||||| |||||||||||||||||
Sbjct: 159 ggtgacagatagagagtgagcacacat 133


>mtr-MIR156b_MI0005571_Medicago_truncatula_miR156b_stem-loop_95
          Length = 95

 Score = 81.8 bits (41), Expect = 4e-17
 Identities = 78/89 (87%), Gaps = 1/89 (1%)
 Strand = Plus / Plus

                                                                      
Query: 10 ggtgacagaagagagtgagcacacatggtattttcttgcatgctgggttcatgcttgaag 69
          |||||||||||||||||||||||||||||| |||| || ||| | | ||||| || ||||
Sbjct: 4  ggtgacagaagagagtgagcacacatggtactttcgtgtatgat-gtttcattctcgaag 62

                                       
Query: 70 ctttgcgtgcttactctctatctgtcacc 98
          || || ||||| |||||||||||||||||
Sbjct: 63 ctatgtgtgctcactctctatctgtcacc 91



 Score = 38.2 bits (19), Expect = 5e-04
 Identities = 26/27 (96%), Gaps = 1/27 (3%)
 Strand = Plus / Minus

                                     
Query: 10 ggtgacaga-agagagtgagcacacat 35
          ||||||||| |||||||||||||||||
Sbjct: 91 ggtgacagatagagagtgagcacacat 65


>ath-MIR156e_MI0000182_Arabidopsis_thaliana_miR156e_stem-loop_107
          Length = 107

 Score = 75.8 bits (38), Expect = 2e-15
 Identities = 83/100 (83%), Gaps = 11/100 (11%)
 Strand = Plus / Plus

                                                                       
Query: 10  ggtgacagaagagagtgagcacacatggtattttcttgcatgct-----------gggtt 58
           |||||||||||||||||||||||||||||  |||||||||||||           || ||
Sbjct: 5   ggtgacagaagagagtgagcacacatggtggtttcttgcatgcttttttgattagggttt 64

                                                   
Query: 59  catgcttgaagctttgcgtgcttactctctatctgtcacc 98
           ||||||||||||| || ||||||||||||| |||||||||
Sbjct: 65  catgcttgaagctatgtgtgcttactctctctctgtcacc 104


>aly-MIR156e_MI0014506_Arabidopsis_lyrata_miR156e_stem-loop_150
          Length = 150

 Score = 71.9 bits (36), Expect = 4e-14
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                      
Query: 10 ggtgacagaagagagtgagcacacatggtattttcttgcatgct 53
          |||||||||||||||||||||||||||||  |||||||||||||
Sbjct: 24 ggtgacagaagagagtgagcacacatggtggtttcttgcatgct 67


>vvi-MIR156e_MI0006489_Vitis_vinifera_miR156e_stem-loop_108
          Length = 108

 Score = 67.9 bits (34), Expect = 5e-13
 Identities = 77/90 (85%), Gaps = 1/90 (1%)
 Strand = Plus / Plus

                                                                      
Query: 10 ggtgacagaagagagtgagcacacatggta-ttttcttgcatgctgggttcatgcttgaa 68
          ||||||||| |||||||||||| ||||||  ||||||||||||  |  |  |||||||||
Sbjct: 9  ggtgacagaggagagtgagcactcatggttcttttcttgcatgaagtttctatgcttgaa 68

                                        
Query: 69 gctttgcgtgcttactctctatctgtcacc 98
          ||| || |||||||||| ||||||||||||
Sbjct: 69 gctctgtgtgcttactccctatctgtcacc 98


>osa-MIR156c_MI0000655_Oryza_sativa_miR156c_stem-loop_149
          Length = 149

 Score = 63.9 bits (32), Expect = 9e-12
 Identities = 42/44 (95%), Gaps = 1/44 (2%)
 Strand = Plus / Plus

                                                      
Query: 12 tgacagaagagagtgagcacacatggt-attttcttgcatgctg 54
          ||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 29 tgacagaagagagtgagcacacatggtgactttcttgcatgctg 72


>tcc-MIR156d_MI0017456_Theobroma_cacao_miR156d_stem-loop_125
          Length = 125

 Score = 61.9 bits (31), Expect = 3e-11
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                         
Query: 5  aggacggtgacagaagagagtgagcacacatggtattttcttgcatg 51
          |||| ||||||||||||||||||||||||| |||  |||||||||||
Sbjct: 14 aggaaggtgacagaagagagtgagcacacagggttctttcttgcatg 60


>osa-MIR156b_MI0000654_Oryza_sativa_miR156b_stem-loop_176
          Length = 176

 Score = 60.0 bits (30), Expect = 1e-10
 Identities = 73/86 (84%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                       
Query: 12  tgacagaagagagtgagcacacatggtattttctt-gcatgctgggttcatgcttgaagc 70
           ||||||||||||||||||||||| |||  |||||| ||||||  |   |||||| | |||
Sbjct: 43  tgacagaagagagtgagcacacacggtgctttcttagcatgcaagagccatgctgggagc 102

                                     
Query: 71  tttgcgtgcttactctctatctgtca 96
           | |||||||| |||||||||||||||
Sbjct: 103 tgtgcgtgctcactctctatctgtca 128


>rco-MIR156a_MI0013370_Ricinus_communis_miR156a_stem-loop_97
          Length = 97

 Score = 58.0 bits (29), Expect = 5e-10
 Identities = 38/40 (95%), Gaps = 2/40 (5%)
 Strand = Plus / Plus

                                                  
Query: 11 gtgacagaagagagtgagcacacatggtattttcttgcat 50
          |||||||||||||||||||||||||||  |||||||||||
Sbjct: 5  gtgacagaagagagtgagcacacatgg--ttttcttgcat 42


>ath-MIR156f_MI0000183_Arabidopsis_thaliana_miR156f_stem-loop_132
          Length = 132

 Score = 58.0 bits (29), Expect = 5e-10
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 10 ggtgacagaagagagtgagcacacatggt 38
          |||||||||||||||||||||||||||||
Sbjct: 19 ggtgacagaagagagtgagcacacatggt 47


>zma-MIR156c_MI0001460_Zea_mays_miR156c_stem-loop_139
          Length = 139

 Score = 54.0 bits (27), Expect = 8e-09
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 12 tgacagaagagagtgagcacacatggt 38
          |||||||||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcacacatggt 47


>ssp-MIR156_MI0018191_Saccharum_ssp._miR156_stem-loop_543
          Length = 543

 Score = 54.0 bits (27), Expect = 8e-09
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 12 tgacagaagagagtgagcacacatggt 38
          |||||||||||||||||||||||||||
Sbjct: 5  tgacagaagagagtgagcacacatggt 31



 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 12  tgacagaagagagtgagcacaca 34
           |||||||||||||||||||||||
Sbjct: 304 tgacagaagagagtgagcacaca 326



 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 59  catgcttgaagctttgcgtgcttactctctatctgtca 96
           |||||| | |||| |||||||| |||||||||||||||
Sbjct: 350 catgctgggagctgtgcgtgctcactctctatctgtca 387


>sof-MIR156_MI0001754_Saccharum_officinarum_miR156_stem-loop_137
          Length = 137

 Score = 54.0 bits (27), Expect = 8e-09
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 12 tgacagaagagagtgagcacacatggt 38
          |||||||||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcacacatggt 47


>sbi-MIR156c_MI0001505_Sorghum_bicolor_miR156c_stem-loop_95
          Length = 95

 Score = 54.0 bits (27), Expect = 8e-09
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 12 tgacagaagagagtgagcacacatggt 38
          |||||||||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcacacatggt 27


>aly-MIR156g_MI0014508_Arabidopsis_lyrata_miR156g_stem-loop_138
          Length = 138

 Score = 52.0 bits (26), Expect = 3e-08
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 4  aaggacggtgacagaagagagtgagcacacatgg 37
          ||||| || |||||||||||||||||||||||||
Sbjct: 24 aaggaaggcgacagaagagagtgagcacacatgg 57


>zma-MIR156h_MI0001463_Zea_mays_miR156h_stem-loop_115
          Length = 115

 Score = 50.1 bits (25), Expect = 1e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 9  cggtgacagaagagagtgagcacac 33
          |||||||||||||||||||||||||
Sbjct: 17 cggtgacagaagagagtgagcacac 41


>zma-MIR156i_MI0001464_Zea_mays_miR156i_stem-loop_117
          Length = 117

 Score = 50.1 bits (25), Expect = 1e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 9  cggtgacagaagagagtgagcacac 33
          |||||||||||||||||||||||||
Sbjct: 10 cggtgacagaagagagtgagcacac 34


>ath-MIR156g_MI0001082_Arabidopsis_thaliana_miR156g_stem-loop_103
          Length = 103

 Score = 50.1 bits (25), Expect = 1e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 13 gacagaagagagtgagcacacatgg 37
          |||||||||||||||||||||||||
Sbjct: 12 gacagaagagagtgagcacacatgg 36


>bdi-MIR156b_MI0018104_Brachypodium_distachyon_miR156b_stem-
          loop_205
          Length = 205

 Score = 50.1 bits (25), Expect = 1e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 10 ggtgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||||
Sbjct: 29 ggtgacagaagagagtgagcacaca 53


>bdi-MIR156d_MI0018122_Brachypodium_distachyon_miR156d_stem-
          loop_151
          Length = 151

 Score = 50.1 bits (25), Expect = 1e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 9  cggtgacagaagagagtgagcacac 33
          |||||||||||||||||||||||||
Sbjct: 28 cggtgacagaagagagtgagcacac 52


>zma-MIR156e_MI0001461_Zea_mays_miR156e_stem-loop_126
          Length = 126

 Score = 50.1 bits (25), Expect = 1e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 9  cggtgacagaagagagtgagcacac 33
          |||||||||||||||||||||||||
Sbjct: 17 cggtgacagaagagagtgagcacac 41


>osa-MIR156a_MI0000653_Oryza_sativa_miR156a_stem-loop_100
          Length = 100

 Score = 50.1 bits (25), Expect = 1e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 10 ggtgacagaagagagtgagcacacatggt 38
          |||||||||||||||||||||||| ||||
Sbjct: 5  ggtgacagaagagagtgagcacacgtggt 33


>mdm-MIR156l_MI0022982_257
          Length = 257

 Score = 48.1 bits (24), Expect = 5e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 10  ggtgacagaagagagtgagcacac 33
           ||||||||||||||||||||||||
Sbjct: 86  ggtgacagaagagagtgagcacac 109


>mdm-MIR156d_MI0022974_124
          Length = 124

 Score = 48.1 bits (24), Expect = 5e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 10 ggtgacagaagagagtgagcacac 33
          ||||||||||||||||||||||||
Sbjct: 20 ggtgacagaagagagtgagcacac 43


>osa-MIR156e_MI0000657_Oryza_sativa_miR156e_stem-loop_104
          Length = 104

 Score = 48.1 bits (24), Expect = 5e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 10 ggtgacagaagagagtgagcacac 33
          ||||||||||||||||||||||||
Sbjct: 8  ggtgacagaagagagtgagcacac 31


>osa-MIR156i_MI0000661_Oryza_sativa_miR156i_stem-loop_90
          Length = 90

 Score = 48.1 bits (24), Expect = 5e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 10 ggtgacagaagagagtgagcacac 33
          ||||||||||||||||||||||||
Sbjct: 1  ggtgacagaagagagtgagcacac 24


>gma-MIR156h_MI0017819_Glycine_max_miR156h_stem-loop_90
          Length = 90

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 10 tgacagaagagagtgagcacaca 32


>osa-MIR156f_MI0000658_Oryza_sativa_miR156f_stem-loop_186
          Length = 186

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 4  tgacagaagagagtgagcacaca 26


>aly-MIR156d_MI0014505_Arabidopsis_lyrata_miR156d_stem-loop_118
          Length = 118

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 17 tgacagaagagagtgagcacaca 39


>ptc-MIR156f_MI0002189_Populus_trichocarpa_miR156f_stem-loop_101
          Length = 101

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacaca 33


>aly-MIR156c_MI0014504_Arabidopsis_lyrata_miR156c_stem-loop_102
          Length = 102

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacaca 33


>tae-MIR156_MI0016450_Triticum_aestivum_miR156_stem-loop_278
          Length = 278

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 12  tgacagaagagagtgagcacaca 34
           |||||||||||||||||||||||
Sbjct: 96  tgacagaagagagtgagcacaca 118


>mdm-MIR156h_MI0022978_94
          Length = 94

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 6  tgacagaagagagtgagcacaca 28


>ath-MIR156a_MI0000178_Arabidopsis_thaliana_miR156a_stem-loop_123
          Length = 123

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcacaca 43


>vun-MIR156a_MI0019565_Vigna_unguiculata_miR156a_stem-loop_94
          Length = 94

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 6  tgacagaagagagtgagcacaca 28


>mdm-MIR156n_MI0022984_137
          Length = 137

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 29 tgacagaagagagtgagcacaca 51


>rco-MIR156b_MI0013371_Ricinus_communis_miR156b_stem-loop_92
          Length = 92

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 6  tgacagaagagagtgagcacaca 28


>mdm-MIR156j_MI0022980_88
          Length = 88

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 3  tgacagaagagagtgagcacaca 25


>ptc-MIR156a_MI0002184_Populus_trichocarpa_miR156a_stem-loop_101
          Length = 101

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacaca 33


>mdm-MIR156ae_MI0023001_114
          Length = 114

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 39/43 (90%), Gaps = 1/43 (2%)
 Strand = Plus / Plus

                                                     
Query: 10 ggtgacagaagagagtgagcacacatgg-tattttcttgcatg 51
          |||||||||||| ||||||||||| ||| | ||||||||||||
Sbjct: 14 ggtgacagaagaaagtgagcacacgtggttcttttcttgcatg 56


>ath-MIR156d_MI0000181_Arabidopsis_thaliana_miR156d_stem-loop_118
          Length = 118

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 18 tgacagaagagagtgagcacaca 40


>ptc-MIR156c_MI0002186_Populus_trichocarpa_miR156c_stem-loop_100
          Length = 100

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacaca 33


>ptc-MIR156e_MI0002188_Populus_trichocarpa_miR156e_stem-loop_100
          Length = 100

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacaca 33


>mdm-MIR156a_MI0022971_90
          Length = 90

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 4  tgacagaagagagtgagcacaca 26


>zma-MIR156b_MI0001459_Zea_mays_miR156b_stem-loop_124
          Length = 124

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcacaca 43



 Score = 38.2 bits (19), Expect = 5e-04
 Identities = 34/39 (87%)
 Strand = Plus / Plus

                                                  
Query: 58  tcatgcttgaagctttgcgtgcttactctctatctgtca 96
           ||||||| | |||| |||||||| || ||||||||||||
Sbjct: 66  tcatgctaggagctgtgcgtgctcaccctctatctgtca 104


>sbi-MIR156b_MI0001506_Sorghum_bicolor_miR156b_stem-loop_84
          Length = 84

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcacaca 23



 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 68 agctttgcgtgcttactctctatctgtca 96
          |||| |||||||| |||||||||||||||
Sbjct: 56 agctgtgcgtgctcactctctatctgtca 84


>ath-MIR156c_MI0000180_Arabidopsis_thaliana_miR156c_stem-loop_104
          Length = 104

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 12 tgacagaagagagtgagcacaca 34


>mdm-MIR156f_MI0022976_210
          Length = 210

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 64 tgacagaagagagtgagcacaca 86


>zma-MIR156a_MI0001462_Zea_mays_miR156a_stem-loop_152
          Length = 152

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 18 tgacagaagagagtgagcacaca 40


>gma-MIR156k_MI0018652_Glycine_max_miR156k_stem-loop_92
          Length = 92

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 6  tgacagaagagagtgagcacaca 28


>aly-MIR156a_MI0014502_Arabidopsis_lyrata_miR156a_stem-loop_184
          Length = 184

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 49 tgacagaagagagtgagcacaca 71


>vvi-MIR156b_MI0006486_Vitis_vinifera_miR156b_stem-loop_102
          Length = 102

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacaca 33


>hvu-MIR156_MI0016449_Hordeum_vulgare_miR156_stem-loop_135
          Length = 135

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcacaca 23


>sbi-MIR156i_MI0010863_Sorghum_bicolor_miR156i_stem-loop_121
          Length = 121

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 3  tgacagaagagagtgagcacaca 25


>zma-MIR156l_MI0013184_Zea_mays_miR156l_stem-loop_90
          Length = 90

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 gtgacagaagagagtgagcacac 33
          |||||||||||||||||||||||
Sbjct: 1  gtgacagaagagagtgagcacac 23


>tcc-MIR156g_MI0017459_Theobroma_cacao_miR156g_stem-loop_120
          Length = 120

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcacaca 43


>bna-MIR156a_MI0005770_Brassica_napus_miR156a_stem-loop_82
          Length = 82

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcacaca 23


>osa-MIR156g_MI0000659_Oryza_sativa_miR156g_stem-loop_116
          Length = 116

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 4  tgacagaagagagtgagcacaca 26


>mdm-MIR156e_MI0022975_90
          Length = 90

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 4  tgacagaagagagtgagcacaca 26


>sbi-MIR156h_MI0010862_Sorghum_bicolor_miR156h_stem-loop_94
          Length = 94

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 gtgacagaagagagtgagcacac 33
          |||||||||||||||||||||||
Sbjct: 1  gtgacagaagagagtgagcacac 23


>mdm-MIR156ad_MI0023000_114
          Length = 114

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 39/43 (90%), Gaps = 1/43 (2%)
 Strand = Plus / Plus

                                                     
Query: 10 ggtgacagaagagagtgagcacacatgg-tattttcttgcatg 51
          |||||||||||| ||||||||||| ||| | ||||||||||||
Sbjct: 14 ggtgacagaagaaagtgagcacacgtggttcttttcttgcatg 56


>sbi-MIR156g_MI0010861_Sorghum_bicolor_miR156g_stem-loop_89
          Length = 89

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 gtgacagaagagagtgagcacac 33
          |||||||||||||||||||||||
Sbjct: 1  gtgacagaagagagtgagcacac 23


>mdm-MIR156c_MI0022973_94
          Length = 94

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgacagaagagagtgagcacaca 34
          |||||||||||||||||||||||
Sbjct: 6  tgacagaagagagtgagcacaca 28


>ssl-MIR156_MI0019340_Salvia_sclarea_miR156_stem-loop_82
          Length = 82

 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tgacagaagagagtgagcacac 33
          ||||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcacac 22


>zma-MIR156d_MI0001456_Zea_mays_miR156d_stem-loop_119
          Length = 119

 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tgacagaagagagtgagcacac 33
          ||||||||||||||||||||||
Sbjct: 16 tgacagaagagagtgagcacac 37


>rco-MIR156d_MI0013373_Ricinus_communis_miR156d_stem-loop_93
          Length = 93

 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tgacagaagagagtgagcacac 33
          ||||||||||||||||||||||
Sbjct: 6  tgacagaagagagtgagcacac 27


>ctr-MIR156_MI0013293_Citrus_trifoliata_miR156_stem-loop_190
          Length = 190

 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tgacagaagagagtgagcacac 33
          ||||||||||||||||||||||
Sbjct: 35 tgacagaagagagtgagcacac 56


>osa-MIR156h_MI0000660_Oryza_sativa_miR156h_stem-loop_101
          Length = 101

 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tgacagaagagagtgagcacac 33
          ||||||||||||||||||||||
Sbjct: 9  tgacagaagagagtgagcacac 30


>ppt-MIR156c_MI0005654_Physcomitrella_patens_miR156c_stem-loop_95
          Length = 95

 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 gtgacagaagagagtgagcaca 32
          ||||||||||||||||||||||
Sbjct: 9  gtgacagaagagagtgagcaca 30


>csi-MIR156_MI0016691_Citrus_sinensis_miR156_stem-loop_103
          Length = 103

 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tgacagaagagagtgagcacac 33
          ||||||||||||||||||||||
Sbjct: 13 tgacagaagagagtgagcacac 34


>tcc-MIR156c_MI0017455_Theobroma_cacao_miR156c_stem-loop_121
          Length = 121

 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tgacagaagagagtgagcacac 33
          ||||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcacac 42


>sbi-MIR156a_MI0001504_Sorghum_bicolor_miR156a_stem-loop_84
          Length = 84

 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tgacagaagagagtgagcacac 33
          ||||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcacac 22


>ghr-MIR156c_MI0005640_Gossypium_hirsutum_miR156c_stem-loop_97
          Length = 97

 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 74/91 (81%), Gaps = 4/91 (4%)
 Strand = Plus / Plus

                                                                      
Query: 10 ggtgacagaagagagtgagcacacatggtattttcttgcatgctgg----gttcatgctt 65
          |||| |||||||||||||||||||| |||  ||| | ||||||| |     |||||||| 
Sbjct: 1  ggtgtcagaagagagtgagcacacagggttctttgtagcatgcttgagcctttcatgcta 60

                                         
Query: 66 gaagctttgcgtgcttactctctatctgtca 96
          |||||| || ||||| || ||||||||||||
Sbjct: 61 gaagctatgtgtgctcaccctctatctgtca 91


>bdi-MIR156c_MI0018109_Brachypodium_distachyon_miR156c_stem-
          loop_146
          Length = 146

 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tgacagaagagagtgagcacac 33
          ||||||||||||||||||||||
Sbjct: 32 tgacagaagagagtgagcacac 53


>osa-MIR156d_MI0000656_Oryza_sativa_miR156d_stem-loop_129
          Length = 129

 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tgacagaagagagtgagcacac 33
          ||||||||||||||||||||||
Sbjct: 20 tgacagaagagagtgagcacac 41


>ghr-MIR156d_MI0005641_Gossypium_hirsutum_miR156d_stem-loop_96
          Length = 96

 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tgacagaagagagtgagcacac 33
          ||||||||||||||||||||||
Sbjct: 9  tgacagaagagagtgagcacac 30


>ppt-MIR156a_MI0003506_Physcomitrella_patens_miR156a_stem-loop_115
          Length = 115

 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 gtgacagaagagagtgagcaca 32
          ||||||||||||||||||||||
Sbjct: 20 gtgacagaagagagtgagcaca 41



 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 17 gaagagagtgagcacacatgg 37
          |||||||||||||||||||||
Sbjct: 91 gaagagagtgagcacacatgg 71


>osa-MIR156j_MI0000662_Oryza_sativa_miR156j_stem-loop_165
          Length = 165

 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tgacagaagagagtgagcacac 33
          ||||||||||||||||||||||
Sbjct: 42 tgacagaagagagtgagcacac 63


>vvi-MIR156d_MI0006488_Vitis_vinifera_miR156d_stem-loop_103
          Length = 103

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcaca 31


>gma-MIR156o_MI0018656_Glycine_max_miR156o_stem-loop_90
          Length = 90

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 5  tgacagaagagagtgagcaca 25


>mdm-MIR156k_MI0022981_145
          Length = 145

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 33 tgacagaagagagtgagcaca 53


>mtr-MIR156d_MI0005585_Medicago_truncatula_miR156d_stem-loop_90
          Length = 90

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 6  tgacagaagagagtgagcaca 26


>ath-MIR156b_MI0000179_Arabidopsis_thaliana_miR156b_stem-loop_183
          Length = 183

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 47 tgacagaagagagtgagcaca 67


>mtr-MIR156i_MI0005626_Medicago_truncatula_miR156i_stem-loop_93
          Length = 93

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 6  tgacagaagagagtgagcaca 26


>gma-MIR156a_MI0001784_Glycine_max_miR156a_stem-loop_122
          Length = 122

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcaca 41


>aly-MIR156b_MI0014503_Arabidopsis_lyrata_miR156b_stem-loop_109
          Length = 109

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 13 tgacagaagagagtgagcaca 33


>gma-MIR156n_MI0018655_Glycine_max_miR156n_stem-loop_89
          Length = 89

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 5  tgacagaagagagtgagcaca 25


>smo-MIR156a_MI0006046_Selaginella_moellendorffii_miR156a_stem-
          loop_102
          Length = 102

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 13 gacagaagagagtgagcacac 33
          |||||||||||||||||||||
Sbjct: 12 gacagaagagagtgagcacac 32


>ppt-MIR156b_MI0005696_Physcomitrella_patens_miR156b_stem-loop_220
          Length = 220

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 gtgacagaagagagtgagcac 31
          |||||||||||||||||||||
Sbjct: 50 gtgacagaagagagtgagcac 70


>zma-MIR156g_MI0001458_Zea_mays_miR156g_stem-loop_121
          Length = 121

 Score = 40.1 bits (20), Expect = 1e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 12 tgacagaagagagtgagcac 31
          ||||||||||||||||||||
Sbjct: 4  tgacagaagagagtgagcac 23


>zma-MIR156f_MI0001457_Zea_mays_miR156f_stem-loop_167
          Length = 167

 Score = 40.1 bits (20), Expect = 1e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 12 tgacagaagagagtgagcac 31
          ||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcac 40


>sbi-MIR156f_MI0010860_Sorghum_bicolor_miR156f_stem-loop_128
          Length = 128

 Score = 40.1 bits (20), Expect = 1e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 12 tgacagaagagagtgagcac 31
          ||||||||||||||||||||
Sbjct: 3  tgacagaagagagtgagcac 22


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.