(107 letters)

Database: hairpin_length.fa 
           18,432 sequences; 1,887,117 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mdm-MIR156t_MI0022990_92                                              177   7e-46
mdm-MIR156u_MI0022991_91                                              161   5e-41
mdm-MIR156v_MI0022992_91                                              161   5e-41
mdm-MIR156w_MI0022993_90                                              128   2e-31
tcc-MIR156a_MI0017453_Theobroma_cacao_miR156a_stem-loop_124           106   1e-24
aqc-MIR529_MI0012110_Aquilegia_caerulea_miR529_stem-loop_125           95   4e-21
rco-MIR156e_MI0013374_Ricinus_communis_miR156e_stem-loop_95            95   4e-21
gma-MIR156f_MI0016559_Glycine_max_miR156f_stem-loop_106                83   2e-17
gma-MIR156b_MI0001790_Glycine_max_miR156b_stem-loop_120                83   2e-17
vvi-MIR156a_MI0006485_Vitis_vinifera_miR156a_stem-loop_104             73   2e-14
ahy-MIR156c_MI0015334_Arachis_hypogaea_miR156c_stem-loop_139           61   8e-11
ahy-MIR156a_MI0015332_Arachis_hypogaea_miR156a_stem-loop_116           61   8e-11
osa-MIR156k_MI0001090_Oryza_sativa_miR156k_stem-loop_106               53   2e-08
zma-MIR156j_MI0001808_Zea_mays_miR156j_stem-loop_125                   51   8e-08
sbi-MIR156d_MI0001548_Sorghum_bicolor_miR156d_stem-loop_125            51   8e-08
aly-MIR156h_MI0014509_Arabidopsis_lyrata_miR156h_stem-loop_99          49   3e-07
ath-MIR156h_MI0001083_Arabidopsis_thaliana_miR156h_stem-loop_106       49   3e-07
bdi-MIR156_MI0011566_Brachypodium_distachyon_miR156_stem-loop_147      47   1e-06
far-MIR156b_MI0016615_Festuca_arundinacea_miR156b_stem-loop_180        47   1e-06
gma-MIR156c_MI0001772_Glycine_max_miR156c_stem-loop_185                47   1e-06
far-MIR156a_MI0016609_Festuca_arundinacea_miR156a_stem-loop_180        47   1e-06
rco-MIR156f_MI0013375_Ricinus_communis_miR156f_stem-loop_97            45   6e-06
tcc-MIR156f_MI0017458_Theobroma_cacao_miR156f_stem-loop_124            45   6e-06
ath-MIR156j_MI0019234_Arabidopsis_thaliana_miR156j_stem-loop_68        45   6e-06
vvi-MIR156f_MI0006490_Vitis_vinifera_miR156f_stem-loop_105             45   6e-06
far-MIR529_MI0016614_Festuca_arundinacea_miR529_stem-loop_120          45   6e-06
ahy-MIR156b_MI0015333_Arachis_hypogaea_miR156b_stem-loop_135           43   2e-05
ptc-MIR156k_MI0002194_Populus_trichocarpa_miR156k_stem-loop_101        43   2e-05
mtr-MIR156_MI0001752_Medicago_truncatula_miR156_stem-loop_460          43   2e-05
mtr-MIR156h_MI0005613_Medicago_truncatula_miR156h_stem-loop_94         41   9e-05
gma-MIR156d_MI0001770_Glycine_max_miR156d_stem-loop_151                41   9e-05
aly-MIR157b_MI0014511_Arabidopsis_lyrata_miR157b_stem-loop_97          41   9e-05
osa-MIR156h_MI0000660_Oryza_sativa_miR156h_stem-loop_101               41   9e-05
vun-MIR156b_MI0019566_Vigna_unguiculata_miR156b_stem-loop_126          41   9e-05
aly-MIR157a_MI0014510_Arabidopsis_lyrata_miR157a_stem-loop_123         41   9e-05
ptc-MIR156j_MI0002193_Populus_trichocarpa_miR156j_stem-loop_100        41   9e-05
mdm-MIR156ac_MI0022999_256                                             41   9e-05
mtr-MIR156f_MI0005605_Medicago_truncatula_miR156f_stem-loop_94         41   9e-05
gma-MIR156i_MI0017820_Glycine_max_miR156i_stem-loop_130                41   9e-05
gma-MIR156l_MI0018653_Glycine_max_miR156l_stem-loop_121                41   9e-05
tcc-MIR156e_MI0017457_Theobroma_cacao_miR156e_stem-loop_123            41   9e-05
rco-MIR156h_MI0013377_Ricinus_communis_miR156h_stem-loop_97            41   9e-05
gra-MIR157a_MI0005642_Gossypium_raimondii_miR157a_stem-loop_101        41   9e-05
vvi-MIR156i_MI0006492_Vitis_vinifera_miR156i_stem-loop_103             41   9e-05
mdm-MIR156ab_MI0022998_180                                             41   9e-05
ath-MIR157a_MI0000184_Arabidopsis_thaliana_miR157a_stem-loop_98        41   9e-05
vvi-MIR156g_MI0006491_Vitis_vinifera_miR156g_stem-loop_103             41   9e-05
gma-MIR156g_MI0016580_Glycine_max_miR156g_stem-loop_118                41   9e-05
pta-MIR156b_MI0005777_Pinus_taeda_miR156b_stem-loop_83                 41   9e-05
ptc-MIR156i_MI0002192_Populus_trichocarpa_miR156i_stem-loop_99         41   9e-05
gma-MIR156j_MI0018651_Glycine_max_miR156j_stem-loop_103                41   9e-05
ath-MIR157b_MI0000185_Arabidopsis_thaliana_miR157b_stem-loop_132       41   9e-05
mtr-MIR156e_MI0005595_Medicago_truncatula_miR156e_stem-loop_172        41   9e-05
gma-MIR156m_MI0018654_Glycine_max_miR156m_stem-loop_115                41   9e-05
ptc-MIR156g_MI0002190_Populus_trichocarpa_miR156g_stem-loop_103        41   9e-05
gra-MIR157b_MI0005643_Gossypium_raimondii_miR157b_stem-loop_91         41   9e-05
osa-MIR156j_MI0000662_Oryza_sativa_miR156j_stem-loop_165               41   9e-05
osa-MIR156f_MI0000658_Oryza_sativa_miR156f_stem-loop_186               39   4e-04
bna-MIR156b_MI0006481_Brassica_napus_miR156b_stem-loop_208             39   4e-04
aly-MIR156d_MI0014505_Arabidopsis_lyrata_miR156d_stem-loop_118         39   4e-04
gma-MIR156e_MI0001771_Glycine_max_miR156e_stem-loop_124                39   4e-04
rco-MIR156g_MI0013376_Ricinus_communis_miR156g_stem-loop_97            39   4e-04
gma-MIR156o_MI0018656_Glycine_max_miR156o_stem-loop_90                 39   4e-04
mdm-MIR156h_MI0022978_94                                               39   4e-04
ath-MIR157c_MI0000186_Arabidopsis_thaliana_miR157c_stem-loop_217       39   4e-04
mdm-MIR156j_MI0022980_88                                               39   4e-04
ath-MIR156d_MI0000181_Arabidopsis_thaliana_miR156d_stem-loop_118       39   4e-04
ptc-MIR156h_MI0002191_Populus_trichocarpa_miR156h_stem-loop_103        39   4e-04
aly-MIR157c_MI0014512_Arabidopsis_lyrata_miR157c_stem-loop_293         39   4e-04
mdm-MIR156a_MI0022971_90                                               39   4e-04
ppt-MIR529d_MI0005924_Physcomitrella_patens_miR529d_stem-loop_136      39   4e-04
gma-MIR156n_MI0018655_Glycine_max_miR156n_stem-loop_89                 39   4e-04
ath-MIR156i_MI0019232_Arabidopsis_thaliana_miR156i_stem-loop_197       39   4e-04
bol-MIR157a_MI0010663_Brassica_oleracea_miR157a_stem-loop_106          39   4e-04
ptc-MIR156d_MI0002187_Populus_trichocarpa_miR156d_stem-loop_101        39   4e-04
mdm-MIR156e_MI0022975_90                                               39   4e-04
bna-MIR156c_MI0006484_Brassica_napus_miR156c_stem-loop_155             39   4e-04
bra-MIR157a_MI0010648_Brassica_rapa_miR157a_stem-loop_149              39   4e-04
vvi-MIR156h_MI0007939_Vitis_vinifera_miR156h_stem-loop_228             39   4e-04
mdm-MIR156c_MI0022973_94                                               39   4e-04

>mdm-MIR156t_MI0022990_92
          Length = 92

 Score =  177 bits (88), Expect = 7e-46
 Identities = 92/92 (100%)
 Strand = Plus / Plus

                                                                       
Query: 9   atgttgacagaagagagagagcacaacccgccatcggctaaggagagtctttaccgttgc 68
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgttgacagaagagagagagcacaacccgccatcggctaaggagagtctttaccgttgc 60

                                           
Query: 69  tgggagtgtgctttctcytcytctgtcatcat 100
           ||||||||||||||||||||||||||||||||
Sbjct: 61  tgggagtgtgctttctcytcytctgtcatcat 92


>mdm-MIR156u_MI0022991_91
          Length = 91

 Score =  161 bits (80), Expect = 5e-41
 Identities = 89/92 (96%), Gaps = 1/92 (1%)
 Strand = Plus / Plus

                                                                       
Query: 9   atgttgacagaagagagagagcacaacccgccatcggctaaggagagtctttaccgttgc 68
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1   atgttgacagaagagagagagcacaacccgccatcggctaaggagagtcttta-cgttgc 59

                                           
Query: 69  tgggagtgtgctttctcytcytctgtcatcat 100
           ||||||||||||||||| || |||||||||||
Sbjct: 60  tgggagtgtgctttctcttcttctgtcatcat 91


>mdm-MIR156v_MI0022992_91
          Length = 91

 Score =  161 bits (80), Expect = 5e-41
 Identities = 89/92 (96%), Gaps = 1/92 (1%)
 Strand = Plus / Plus

                                                                       
Query: 9   atgttgacagaagagagagagcacaacccgccatcggctaaggagagtctttaccgttgc 68
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1   atgttgacagaagagagagagcacaacccgccatcggctaaggagagtcttta-cgttgc 59

                                           
Query: 69  tgggagtgtgctttctcytcytctgtcatcat 100
           ||||||||||||||||| || |||||||||||
Sbjct: 60  tgggagtgtgctttctcttcttctgtcatcat 91


>mdm-MIR156w_MI0022993_90
          Length = 90

 Score =  128 bits (64), Expect = 2e-31
 Identities = 82/90 (91%)
 Strand = Plus / Plus

                                                                      
Query: 10 tgttgacagaagagagagagcacaacccgccatcggctaaggagagtctttaccgttgct 69
          |||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||| |
Sbjct: 1  tgttgacagaagagagagagcacaacccrccatcggctaaagagagtcttttccgttgtt 60

                                        
Query: 70 gggagtgtgctttctcytcytctgtcatca 99
          ||||||||||| |||  || ||||||||||
Sbjct: 61 gggagtgtgctctcttttcttctgtcatca 90


>tcc-MIR156a_MI0017453_Theobroma_cacao_miR156a_stem-loop_124
          Length = 124

 Score =  106 bits (53), Expect = 1e-24
 Identities = 82/93 (88%)
 Strand = Plus / Plus

                                                                       
Query: 9   atgttgacagaagagagagagcacaacccgccatcggctaaggagagtctttaccgttgc 68
           |||||||||||||||||||||||||||||| |||| ||||| || ||||||| |  ||| 
Sbjct: 17  atgttgacagaagagagagagcacaacccggcatcagctaaagaaagtctttgcttttgt 76

                                            
Query: 69  tgggagtgtgctttctcytcytctgtcatcatc 101
           ||||||||||||||||| || ||||||| ||||
Sbjct: 77  tgggagtgtgctttctcttcttctgtcaccatc 109


>aqc-MIR529_MI0012110_Aquilegia_caerulea_miR529_stem-loop_125
          Length = 125

 Score = 94.8 bits (47), Expect = 4e-21
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                       
Query: 7   atatgttgacagaagagagagagcacaacccgccatcggctaaggagagtctttaccgtt 66
           |||||||||||||||||||||||||||||||  |||| ||||| |||||||||| |  ||
Sbjct: 12  atatgttgacagaagagagagagcacaacccatcatcagctaaagagagtcttttctttt 71

                                              
Query: 67  gctgggagtgtgctttctcytcytctgtcatcatc 101
           | |||||||||||| | |  || ||||||||||||
Sbjct: 72  gttgggagtgtgctctttgctcttctgtcatcatc 106


>rco-MIR156e_MI0013374_Ricinus_communis_miR156e_stem-loop_95
          Length = 95

 Score = 94.8 bits (47), Expect = 4e-21
 Identities = 83/94 (88%), Gaps = 3/94 (3%)
 Strand = Plus / Plus

                                                                       
Query: 9   atgttgacagaagagagagagcacaacccgcca-tcggctaaggagagtctttaccgttg 67
           |||||||||||||||||||||||||||||| || | ||||||  ||||||||| || |||
Sbjct: 2   atgttgacagaagagagagagcacaacccggcattaggctaa--agagtctttgcctttg 59

                                             
Query: 68  ctgggagtgtgctttctcytcytctgtcatcatc 101
            |||||||||||| |||| || ||||||||||||
Sbjct: 60  ttgggagtgtgctctctcctcttctgtcatcatc 93


>gma-MIR156f_MI0016559_Glycine_max_miR156f_stem-loop_106
          Length = 106

 Score = 82.8 bits (41), Expect = 2e-17
 Identities = 80/93 (86%), Gaps = 1/93 (1%)
 Strand = Plus / Plus

                                                                       
Query: 9   atgttgacagaagagagagagcacaacccgccatcggctaaggagagtctttaccgttgc 68
           ||||||||||||||||||||||||||||||  |  || ||| | |||||||| || ||| 
Sbjct: 8   atgttgacagaagagagagagcacaacccgggaatggttaaag-gagtctttgcctttgt 66

                                            
Query: 69  tgggagtgtgctttctcytcytctgtcatcatc 101
           |||||||||||| |||| || ||||||||||||
Sbjct: 67  tgggagtgtgctctctcttcctctgtcatcatc 99


>gma-MIR156b_MI0001790_Glycine_max_miR156b_stem-loop_120
          Length = 120

 Score = 82.8 bits (41), Expect = 2e-17
 Identities = 80/93 (86%), Gaps = 1/93 (1%)
 Strand = Plus / Plus

                                                                       
Query: 9   atgttgacagaagagagagagcacaacccgccatcggctaaggagagtctttaccgttgc 68
           ||||||||||||||||||||||||||||||  |  |||||| | |||||||| || ||| 
Sbjct: 17  atgttgacagaagagagagagcacaacccgggaatggctaaag-gagtctttgcctttgt 75

                                            
Query: 69  tgggagtgtgctttctcytcytctgtcatcatc 101
           |||||||||||  |||| || ||||||||||||
Sbjct: 76  tgggagtgtgccctctcttcctctgtcatcatc 108


>vvi-MIR156a_MI0006485_Vitis_vinifera_miR156a_stem-loop_104
          Length = 104

 Score = 72.7 bits (36), Expect = 2e-14
 Identities = 80/95 (84%), Gaps = 2/95 (2%)
 Strand = Plus / Plus

                                                                       
Query: 7   atatgttgacagaagagagagagcacaacccgccatcggctaaggagagtctttaccgtt 66
           ||||||||||||||||||| |||||||||||  |||| |||||  ||| ||||| |  ||
Sbjct: 5   atatgttgacagaagagagggagcacaacccagcatcagctaa--agactctttgctttt 62

                                              
Query: 67  gctgggagtgtgctttctcytcytctgtcatcatc 101
             |||||||||||| |||| || ||||||||||||
Sbjct: 63  cttgggagtgtgctctctcttcttctgtcatcatc 97


>ahy-MIR156c_MI0015334_Arachis_hypogaea_miR156c_stem-loop_139
          Length = 139

 Score = 60.7 bits (30), Expect = 8e-11
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                        
Query: 9  atgttgacagaagagagagagcacaacccg 38
          ||||||||||||||||||||||||||||||
Sbjct: 18 atgttgacagaagagagagagcacaacccg 47



 Score = 50.7 bits (25), Expect = 8e-08
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 58  tttaccgttgctgggagtgtgctttctcytcytctgtcatcatct 102
           |||||| ||| |||||||||||| |||  || |||||||||||||
Sbjct: 67  tttacctttgttgggagtgtgctctctactcttctgtcatcatct 111


>ahy-MIR156a_MI0015332_Arachis_hypogaea_miR156a_stem-loop_116
          Length = 116

 Score = 60.7 bits (30), Expect = 8e-11
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                        
Query: 9  atgttgacagaagagagagagcacaacccg 38
          ||||||||||||||||||||||||||||||
Sbjct: 14 atgttgacagaagagagagagcacaacccg 43



 Score = 50.7 bits (25), Expect = 8e-08
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 58  tttaccgttgctgggagtgtgctttctcytcytctgtcatcatct 102
           |||||| ||| |||||||||||| |||  || |||||||||||||
Sbjct: 63  tttacctttgttgggagtgtgctctctactcttctgtcatcatct 107


>osa-MIR156k_MI0001090_Oryza_sativa_miR156k_stem-loop_106
          Length = 106

 Score = 52.7 bits (26), Expect = 2e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 13 tgacagaagagagagagcacaacccg 38
          ||||||||||||||||||||||||||
Sbjct: 11 tgacagaagagagagagcacaacccg 36


>zma-MIR156j_MI0001808_Zea_mays_miR156j_stem-loop_125
          Length = 125

 Score = 50.7 bits (25), Expect = 8e-08
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 13 tgacagaagagagagagcacaaccc 37
          |||||||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcacaaccc 45


>sbi-MIR156d_MI0001548_Sorghum_bicolor_miR156d_stem-loop_125
          Length = 125

 Score = 50.7 bits (25), Expect = 8e-08
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 13 tgacagaagagagagagcacaaccc 37
          |||||||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcacaaccc 45


>aly-MIR156h_MI0014509_Arabidopsis_lyrata_miR156h_stem-loop_99
          Length = 99

 Score = 48.7 bits (24), Expect = 3e-07
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 9  atgttgacagaagagagagagcacaacc 36
          |||||||||||||| |||||||||||||
Sbjct: 4  atgttgacagaagaaagagagcacaacc 31


>ath-MIR156h_MI0001083_Arabidopsis_thaliana_miR156h_stem-loop_106
          Length = 106

 Score = 48.7 bits (24), Expect = 3e-07
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 9  atgttgacagaagagagagagcacaacc 36
          |||||||||||||| |||||||||||||
Sbjct: 8  atgttgacagaagaaagagagcacaacc 35


>bdi-MIR156_MI0011566_Brachypodium_distachyon_miR156_stem-loop_147
          Length = 147

 Score = 46.7 bits (23), Expect = 1e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 11  gttgacagaagagagagagcaca 33
           |||||||||||||||||||||||
Sbjct: 99  gttgacagaagagagagagcaca 121


>far-MIR156b_MI0016615_Festuca_arundinacea_miR156b_stem-loop_180
          Length = 180

 Score = 46.7 bits (23), Expect = 1e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 gttgacagaagagagagagcaca 33
          |||||||||||||||||||||||
Sbjct: 52 gttgacagaagagagagagcaca 74


>gma-MIR156c_MI0001772_Glycine_max_miR156c_stem-loop_185
          Length = 185

 Score = 46.7 bits (23), Expect = 1e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 10  tgttgacagaagagagagagcacaacc 36
           ||||||||||||| |||||||||||||
Sbjct: 144 tgttgacagaagatagagagcacaacc 170


>far-MIR156a_MI0016609_Festuca_arundinacea_miR156a_stem-loop_180
          Length = 180

 Score = 46.7 bits (23), Expect = 1e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 gttgacagaagagagagagcaca 33
          |||||||||||||||||||||||
Sbjct: 52 gttgacagaagagagagagcaca 74


>rco-MIR156f_MI0013375_Ricinus_communis_miR156f_stem-loop_97
          Length = 97

 Score = 44.6 bits (22), Expect = 6e-06
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 10 tgttgacagaagagagagagcacaac 35
          ||||||||||||| ||||||||||||
Sbjct: 4  tgttgacagaagatagagagcacaac 29


>tcc-MIR156f_MI0017458_Theobroma_cacao_miR156f_stem-loop_124
          Length = 124

 Score = 44.6 bits (22), Expect = 6e-06
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 10 tgttgacagaagagagagagcacaac 35
          ||||||||||||| ||||||||||||
Sbjct: 19 tgttgacagaagatagagagcacaac 44


>ath-MIR156j_MI0019234_Arabidopsis_thaliana_miR156j_stem-loop_68
          Length = 68

 Score = 44.6 bits (22), Expect = 6e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 ttgacagaagagagagagcaca 33
          ||||||||||||||||||||||
Sbjct: 2  ttgacagaagagagagagcaca 23


>vvi-MIR156f_MI0006490_Vitis_vinifera_miR156f_stem-loop_105
          Length = 105

 Score = 44.6 bits (22), Expect = 6e-06
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 10 tgttgacagaagagagagagcacaac 35
          ||||||||||||| ||||||||||||
Sbjct: 9  tgttgacagaagatagagagcacaac 34


>far-MIR529_MI0016614_Festuca_arundinacea_miR529_stem-loop_120
          Length = 120

 Score = 44.6 bits (22), Expect = 6e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 ttgacagaagagagagagcaca 33
          ||||||||||||||||||||||
Sbjct: 47 ttgacagaagagagagagcaca 68


>ahy-MIR156b_MI0015333_Arachis_hypogaea_miR156b_stem-loop_135
          Length = 135

 Score = 42.6 bits (21), Expect = 2e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 10 tgttgacagaagagagagagcacaa 34
          ||||||||||||| |||||||||||
Sbjct: 21 tgttgacagaagatagagagcacaa 45


>ptc-MIR156k_MI0002194_Populus_trichocarpa_miR156k_stem-loop_101
          Length = 101

 Score = 42.6 bits (21), Expect = 2e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 13 tgacagaagagagagagcacaaccc 37
          ||||||||||||| |||||||||||
Sbjct: 11 tgacagaagagagggagcacaaccc 35


>mtr-MIR156_MI0001752_Medicago_truncatula_miR156_stem-loop_460
          Length = 460

 Score = 42.6 bits (21), Expect = 2e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 13 tgacagaagagagagagcaca 33
          |||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcaca 41


>mtr-MIR156h_MI0005613_Medicago_truncatula_miR156h_stem-loop_94
          Length = 94

 Score = 40.6 bits (20), Expect = 9e-05
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 10 tgttgacagaagagagagagcaca 33
          ||||||||||||| ||||||||||
Sbjct: 4  tgttgacagaagatagagagcaca 27


>gma-MIR156d_MI0001770_Glycine_max_miR156d_stem-loop_151
          Length = 151

 Score = 40.6 bits (20), Expect = 9e-05
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 10 tgttgacagaagagagagagcaca 33
          ||||||||||||| ||||||||||
Sbjct: 19 tgttgacagaagatagagagcaca 42


>aly-MIR157b_MI0014511_Arabidopsis_lyrata_miR157b_stem-loop_97
          Length = 97

 Score = 40.6 bits (20), Expect = 9e-05
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 10 tgttgacagaagagagagagcaca 33
          ||||||||||||| ||||||||||
Sbjct: 2  tgttgacagaagatagagagcaca 25


>osa-MIR156h_MI0000660_Oryza_sativa_miR156h_stem-loop_101
          Length = 101

 Score = 40.6 bits (20), Expect = 9e-05
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 10 tgttgacagaagagagagagcaca 33
          |||||||||||||||| |||||||
Sbjct: 6  tgttgacagaagagagtgagcaca 29


>vun-MIR156b_MI0019566_Vigna_unguiculata_miR156b_stem-loop_126
          Length = 126

 Score = 40.6 bits (20), Expect = 9e-05
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 10 tgttgacagaagagagagagcaca 33
          ||||||||||||| ||||||||||
Sbjct: 19 tgttgacagaagatagagagcaca 42


>aly-MIR157a_MI0014510_Arabidopsis_lyrata_miR157a_stem-loop_123
          Length = 123

 Score = 40.6 bits (20), Expect = 9e-05
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 10 tgttgacagaagagagagagcaca 33
          ||||||||||||| ||||||||||
Sbjct: 14 tgttgacagaagatagagagcaca 37


>ptc-MIR156j_MI0002193_Populus_trichocarpa_miR156j_stem-loop_100
          Length = 100

 Score = 40.6 bits (20), Expect = 9e-05
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 10 tgttgacagaagagagagagcaca 33
          ||||||||||||| ||||||||||
Sbjct: 9  tgttgacagaagatagagagcaca 32


>mdm-MIR156ac_MI0022999_256
          Length = 256

 Score = 40.6 bits (20), Expect = 9e-05
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 10  tgttgacagaagagagagagcaca 33
           ||||||||||||| ||||||||||
Sbjct: 85  tgttgacagaagatagagagcaca 108


>mtr-MIR156f_MI0005605_Medicago_truncatula_miR156f_stem-loop_94
          Length = 94

 Score = 40.6 bits (20), Expect = 9e-05
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 10 tgttgacagaagagagagagcaca 33
          ||||||||||||| ||||||||||
Sbjct: 4  tgttgacagaagatagagagcaca 27


>gma-MIR156i_MI0017820_Glycine_max_miR156i_stem-loop_130
          Length = 130

 Score = 40.6 bits (20), Expect = 9e-05
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 10 tgttgacagaagagagagagcaca 33
          ||||||||||||| ||||||||||
Sbjct: 8  tgttgacagaagatagagagcaca 31


>gma-MIR156l_MI0018653_Glycine_max_miR156l_stem-loop_121
          Length = 121

 Score = 40.6 bits (20), Expect = 9e-05
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 10 tgttgacagaagagagagagcaca 33
          ||||||||||||| ||||||||||
Sbjct: 9  tgttgacagaagatagagagcaca 32


>tcc-MIR156e_MI0017457_Theobroma_cacao_miR156e_stem-loop_123
          Length = 123

 Score = 40.6 bits (20), Expect = 9e-05
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 10 tgttgacagaagagagagagcaca 33
          ||||||||||||| ||||||||||
Sbjct: 19 tgttgacagaagatagagagcaca 42


>rco-MIR156h_MI0013377_Ricinus_communis_miR156h_stem-loop_97
          Length = 97

 Score = 40.6 bits (20), Expect = 9e-05
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 10 tgttgacagaagagagagagcaca 33
          ||||||||||||| ||||||||||
Sbjct: 4  tgttgacagaagatagagagcaca 27


>gra-MIR157a_MI0005642_Gossypium_raimondii_miR157a_stem-loop_101
          Length = 101

 Score = 40.6 bits (20), Expect = 9e-05
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 10 tgttgacagaagagagagagcaca 33
          ||||||||||||| ||||||||||
Sbjct: 3  tgttgacagaagatagagagcaca 26


>vvi-MIR156i_MI0006492_Vitis_vinifera_miR156i_stem-loop_103
          Length = 103

 Score = 40.6 bits (20), Expect = 9e-05
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 10 tgttgacagaagagagagagcaca 33
          ||||||||||||| ||||||||||
Sbjct: 9  tgttgacagaagatagagagcaca 32


>mdm-MIR156ab_MI0022998_180
          Length = 180

 Score = 40.6 bits (20), Expect = 9e-05
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 10 tgttgacagaagagagagagcaca 33
          ||||||||||||| ||||||||||
Sbjct: 48 tgttgacagaagatagagagcaca 71


>ath-MIR157a_MI0000184_Arabidopsis_thaliana_miR157a_stem-loop_98
          Length = 98

 Score = 40.6 bits (20), Expect = 9e-05
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 10 tgttgacagaagagagagagcaca 33
          ||||||||||||| ||||||||||
Sbjct: 2  tgttgacagaagatagagagcaca 25


>vvi-MIR156g_MI0006491_Vitis_vinifera_miR156g_stem-loop_103
          Length = 103

 Score = 40.6 bits (20), Expect = 9e-05
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 10 tgttgacagaagagagagagcaca 33
          ||||||||||||| ||||||||||
Sbjct: 9  tgttgacagaagatagagagcaca 32


>gma-MIR156g_MI0016580_Glycine_max_miR156g_stem-loop_118
          Length = 118

 Score = 40.6 bits (20), Expect = 9e-05
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 10 tgttgacagaagagagagagcaca 33
          ||||||||||||| ||||||||||
Sbjct: 22 tgttgacagaagatagagagcaca 45



 Score = 38.6 bits (19), Expect = 4e-04
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 12  ttgacagaagagagagagcacaa 34
           ||||||||||| |||||||||||
Sbjct: 107 ttgacagaagatagagagcacaa 85


>pta-MIR156b_MI0005777_Pinus_taeda_miR156b_stem-loop_83
          Length = 83

 Score = 40.6 bits (20), Expect = 9e-05
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 13 tgacagaagagagagagcacaacc 36
          |||||||||| |||||||||||||
Sbjct: 3  tgacagaagatagagagcacaacc 26


>ptc-MIR156i_MI0002192_Populus_trichocarpa_miR156i_stem-loop_99
          Length = 99

 Score = 40.6 bits (20), Expect = 9e-05
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 10 tgttgacagaagagagagagcaca 33
          ||||||||||||| ||||||||||
Sbjct: 9  tgttgacagaagatagagagcaca 32


>gma-MIR156j_MI0018651_Glycine_max_miR156j_stem-loop_103
          Length = 103

 Score = 40.6 bits (20), Expect = 9e-05
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 10 tgttgacagaagagagagagcaca 33
          ||||||||||||| ||||||||||
Sbjct: 9  tgttgacagaagatagagagcaca 32


>ath-MIR157b_MI0000185_Arabidopsis_thaliana_miR157b_stem-loop_132
          Length = 132

 Score = 40.6 bits (20), Expect = 9e-05
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 10 tgttgacagaagagagagagcaca 33
          ||||||||||||| ||||||||||
Sbjct: 17 tgttgacagaagatagagagcaca 40


>mtr-MIR156e_MI0005595_Medicago_truncatula_miR156e_stem-loop_172
          Length = 172

 Score = 40.6 bits (20), Expect = 9e-05
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 10 tgttgacagaagagagagagcaca 33
          ||||||||||||| ||||||||||
Sbjct: 4  tgttgacagaagatagagagcaca 27


>gma-MIR156m_MI0018654_Glycine_max_miR156m_stem-loop_115
          Length = 115

 Score = 40.6 bits (20), Expect = 9e-05
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 10 tgttgacagaagagagagagcaca 33
          ||||||||||||| ||||||||||
Sbjct: 6  tgttgacagaagatagagagcaca 29


>ptc-MIR156g_MI0002190_Populus_trichocarpa_miR156g_stem-loop_103
          Length = 103

 Score = 40.6 bits (20), Expect = 9e-05
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 10 tgttgacagaagagagagagcaca 33
          ||||||||||||| ||||||||||
Sbjct: 9  tgttgacagaagatagagagcaca 32


>gra-MIR157b_MI0005643_Gossypium_raimondii_miR157b_stem-loop_91
          Length = 91

 Score = 40.6 bits (20), Expect = 9e-05
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 10 tgttgacagaagagagagagcaca 33
          ||||||||||||| ||||||||||
Sbjct: 3  tgttgacagaagatagagagcaca 26


>osa-MIR156j_MI0000662_Oryza_sativa_miR156j_stem-loop_165
          Length = 165

 Score = 40.6 bits (20), Expect = 9e-05
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 10 tgttgacagaagagagagagcaca 33
          |||||||||||||||| |||||||
Sbjct: 39 tgttgacagaagagagtgagcaca 62


>osa-MIR156f_MI0000658_Oryza_sativa_miR156f_stem-loop_186
          Length = 186

 Score = 38.6 bits (19), Expect = 4e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 11 gttgacagaagagagagagcaca 33
          ||||||||||||||| |||||||
Sbjct: 2  gttgacagaagagagtgagcaca 24


>bna-MIR156b_MI0006481_Brassica_napus_miR156b_stem-loop_208
          Length = 208

 Score = 38.6 bits (19), Expect = 4e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 10 tgttgacagaagagagagagcac 32
          ||||||||||||| |||||||||
Sbjct: 23 tgttgacagaagatagagagcac 45


>aly-MIR156d_MI0014505_Arabidopsis_lyrata_miR156d_stem-loop_118
          Length = 118

 Score = 38.6 bits (19), Expect = 4e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 11 gttgacagaagagagagagcaca 33
          ||||||||||||||| |||||||
Sbjct: 15 gttgacagaagagagtgagcaca 37


>gma-MIR156e_MI0001771_Glycine_max_miR156e_stem-loop_124
          Length = 124

 Score = 38.6 bits (19), Expect = 4e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 10 tgttgacagaagagagagagcac 32
          ||||||||||||| |||||||||
Sbjct: 19 tgttgacagaagatagagagcac 41


>rco-MIR156g_MI0013376_Ricinus_communis_miR156g_stem-loop_97
          Length = 97

 Score = 38.6 bits (19), Expect = 4e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 10 tgttgacagaagagagagagcac 32
          ||||||||||||| |||||||||
Sbjct: 4  tgttgacagaagatagagagcac 26


>gma-MIR156o_MI0018656_Glycine_max_miR156o_stem-loop_90
          Length = 90

 Score = 38.6 bits (19), Expect = 4e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 12 ttgacagaagagagagagcacaa 34
          |||||||||||||| ||||||||
Sbjct: 4  ttgacagaagagagtgagcacaa 26


>mdm-MIR156h_MI0022978_94
          Length = 94

 Score = 38.6 bits (19), Expect = 4e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 11 gttgacagaagagagagagcaca 33
          ||||||||||||||| |||||||
Sbjct: 4  gttgacagaagagagtgagcaca 26


>ath-MIR157c_MI0000186_Arabidopsis_thaliana_miR157c_stem-loop_217
          Length = 217

 Score = 38.6 bits (19), Expect = 4e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 10 tgttgacagaagagagagagcac 32
          ||||||||||||| |||||||||
Sbjct: 22 tgttgacagaagatagagagcac 44


>mdm-MIR156j_MI0022980_88
          Length = 88

 Score = 38.6 bits (19), Expect = 4e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 11 gttgacagaagagagagagcaca 33
          ||||||||||||||| |||||||
Sbjct: 1  gttgacagaagagagtgagcaca 23


>ath-MIR156d_MI0000181_Arabidopsis_thaliana_miR156d_stem-loop_118
          Length = 118

 Score = 38.6 bits (19), Expect = 4e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 11 gttgacagaagagagagagcaca 33
          ||||||||||||||| |||||||
Sbjct: 16 gttgacagaagagagtgagcaca 38


>ptc-MIR156h_MI0002191_Populus_trichocarpa_miR156h_stem-loop_103
          Length = 103

 Score = 38.6 bits (19), Expect = 4e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 10 tgttgacagaagagagagagcac 32
          ||||||||||||| |||||||||
Sbjct: 9  tgttgacagaagatagagagcac 31


>aly-MIR157c_MI0014512_Arabidopsis_lyrata_miR157c_stem-loop_293
          Length = 293

 Score = 38.6 bits (19), Expect = 4e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 10 tgttgacagaagagagagagcac 32
          ||||||||||||| |||||||||
Sbjct: 53 tgttgacagaagatagagagcac 75


>mdm-MIR156a_MI0022971_90
          Length = 90

 Score = 38.6 bits (19), Expect = 4e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 11 gttgacagaagagagagagcaca 33
          ||||||||||||||| |||||||
Sbjct: 2  gttgacagaagagagtgagcaca 24


>ppt-MIR529d_MI0005924_Physcomitrella_patens_miR529d_stem-loop_136
          Length = 136

 Score = 38.6 bits (19), Expect = 4e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 16 cagaagagagagagcacaacccg 38
          |||||||||||||||||| ||||
Sbjct: 36 cagaagagagagagcacagcccg 58


>gma-MIR156n_MI0018655_Glycine_max_miR156n_stem-loop_89
          Length = 89

 Score = 38.6 bits (19), Expect = 4e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 12 ttgacagaagagagagagcacaa 34
          |||||||||||||| ||||||||
Sbjct: 4  ttgacagaagagagtgagcacaa 26


>ath-MIR156i_MI0019232_Arabidopsis_thaliana_miR156i_stem-loop_197
          Length = 197

 Score = 38.6 bits (19), Expect = 4e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 13 tgacagaagagagagagca 31
          |||||||||||||||||||
Sbjct: 5  tgacagaagagagagagca 23


>bol-MIR157a_MI0010663_Brassica_oleracea_miR157a_stem-loop_106
          Length = 106

 Score = 38.6 bits (19), Expect = 4e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 10 tgttgacagaagagagagagcac 32
          ||||||||||||| |||||||||
Sbjct: 4  tgttgacagaagatagagagcac 26


>ptc-MIR156d_MI0002187_Populus_trichocarpa_miR156d_stem-loop_101
          Length = 101

 Score = 38.6 bits (19), Expect = 4e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 11 gttgacagaagagagagagcaca 33
          ||||||||||||||| |||||||
Sbjct: 9  gttgacagaagagagtgagcaca 31


>mdm-MIR156e_MI0022975_90
          Length = 90

 Score = 38.6 bits (19), Expect = 4e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 11 gttgacagaagagagagagcaca 33
          ||||||||||||||| |||||||
Sbjct: 2  gttgacagaagagagtgagcaca 24


>bna-MIR156c_MI0006484_Brassica_napus_miR156c_stem-loop_155
          Length = 155

 Score = 38.6 bits (19), Expect = 4e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 10 tgttgacagaagagagagagcac 32
          ||||||||||||| |||||||||
Sbjct: 16 tgttgacagaagatagagagcac 38


>bra-MIR157a_MI0010648_Brassica_rapa_miR157a_stem-loop_149
          Length = 149

 Score = 38.6 bits (19), Expect = 4e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 10 tgttgacagaagagagagagcac 32
          ||||||||||||| |||||||||
Sbjct: 12 tgttgacagaagatagagagcac 34


>vvi-MIR156h_MI0007939_Vitis_vinifera_miR156h_stem-loop_228
          Length = 228

 Score = 38.6 bits (19), Expect = 4e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 13 tgacagaagagagagagca 31
          |||||||||||||||||||
Sbjct: 11 tgacagaagagagagagca 29


>mdm-MIR156c_MI0022973_94
          Length = 94

 Score = 38.6 bits (19), Expect = 4e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 11 gttgacagaagagagagagcaca 33
          ||||||||||||||| |||||||
Sbjct: 4  gttgacagaagagagtgagcaca 26


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.