(144 letters)

Database: hairpin_length.fa 
           18,432 sequences; 1,887,117 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mdm-MIR160b_MI0023005_89                                              176   1e-45
mdm-MIR160d_MI0023007_89                                              176   1e-45
mdm-MIR160a_MI0023004_83                                              100   2e-22
rco-MIR160b_MI0013380_Ricinus_communis_miR160b_stem-loop_96            70   2e-13
ptc-MIR160a_MI0002201_Populus_trichocarpa_miR160a_stem-loop_102        70   2e-13
ptc-MIR160d_MI0002204_Populus_trichocarpa_miR160d_stem-loop_103        60   2e-10
ath-MIR160c_MI0000192_Arabidopsis_thaliana_miR160c_stem-loop_89        52   5e-08
aly-MIR160c_MI0014523_Arabidopsis_lyrata_miR160c_stem-loop_119         52   5e-08
vvi-MIR160c_MI0006498_Vitis_vinifera_miR160c_stem-loop_106             52   5e-08
tae-MIR160_MI0006172_Triticum_aestivum_miR160_stem-loop_148            50   2e-07
bdi-MIR160a_MI0018086_Brachypodium_distachyon_miR160a_stem-loop_175    50   2e-07
aly-MIR160b_MI0014522_Arabidopsis_lyrata_miR160b_stem-loop_125         50   2e-07
ath-MIR160b_MI0000191_Arabidopsis_thaliana_miR160b_stem-loop_89        50   2e-07
osa-MIR160d_MI0000666_Oryza_sativa_miR160d_stem-loop_142               48   7e-07
zma-MIR160e_MI0001479_Zea_mays_miR160e_stem-loop_94                    48   7e-07
far-MIR160_MI0016604_Festuca_arundinacea_miR160_stem-loop_148          48   7e-07
zma-MIR160d_MI0001467_Zea_mays_miR160d_stem-loop_142                   48   7e-07
zma-MIR160g_MI0013192_Zea_mays_miR160g_stem-loop_86                    48   7e-07
tcc-MIR160b_MI0017461_Theobroma_cacao_miR160b_stem-loop_120            46   3e-06
bra-MIR160a_MI0010650_Brassica_rapa_miR160a_stem-loop_127              46   3e-06
vvi-MIR160e_MI0006501_Vitis_vinifera_miR160e_stem-loop_102             46   3e-06
sly-MIR160a_MI0008357_Solanum_lycopersicum_miR160a_stem-loop_129       46   3e-06
bdi-MIR160b_MI0018093_Brachypodium_distachyon_miR160b_stem-loop_146    46   3e-06
aly-MIR160a_MI0014521_Arabidopsis_lyrata_miR160a_stem-loop_158         46   3e-06
pab-MIR160a_MI0016116_Picea_abies_miR160a_stem-loop_106                46   3e-06
zma-MIR160a_MI0001465_Zea_mays_miR160a_stem-loop_104                   46   3e-06
ath-MIR160a_MI0000190_Arabidopsis_thaliana_miR160a_stem-loop_85        46   3e-06
sbi-MIR160b_MI0001510_Sorghum_bicolor_miR160b_stem-loop_82             46   3e-06
bdi-MIR160c_MI0018100_Brachypodium_distachyon_miR160c_stem-loop_148    46   3e-06
osa-MIR160a_MI0000663_Oryza_sativa_miR160a_stem-loop_88                46   3e-06
zma-MIR160b_MI0001468_Zea_mays_miR160b_stem-loop_121                   46   3e-06
sbi-MIR160a_MI0001508_Sorghum_bicolor_miR160a_stem-loop_84             46   3e-06
ppt-MIR160a_MI0005655_Physcomitrella_patens_miR160a_stem-loop_99       44   1e-05
zma-MIR160f_MI0001848_Zea_mays_miR160f_stem-loop_116                   44   1e-05
vvi-MIR160d_MI0006499_Vitis_vinifera_miR160d_stem-loop_102             44   1e-05
osa-MIR160b_MI0000664_Oryza_sativa_miR160b_stem-loop_139               44   1e-05
zma-MIR160c_MI0001466_Zea_mays_miR160c_stem-loop_100                   44   1e-05
sbi-MIR160c_MI0001509_Sorghum_bicolor_miR160c_stem-loop_83             44   1e-05
smo-MIR160b_MI0006052_Selaginella_moellendorffii_miR160b_stem-lo...    44   1e-05
sbi-MIR160e_MI0001511_Sorghum_bicolor_miR160e_stem-loop_95             44   1e-05
sbi-MIR160d_MI0001507_Sorghum_bicolor_miR160d_stem-loop_100            44   1e-05
bdi-MIR160d_MI0018106_Brachypodium_distachyon_miR160d_stem-loop_150    44   1e-05
osa-MIR160e_MI0001100_Oryza_sativa_miR160e_stem-loop_114               44   1e-05
ttu-MIR160_MI0016454_Triticum_turgidum_miR160_stem-loop_100            44   1e-05
osa-MIR160c_MI0000665_Oryza_sativa_miR160c_stem-loop_99                44   1e-05
ppt-MIR160f_MI0005902_Physcomitrella_patens_miR160f_stem-loop_138      44   1e-05
ppt-MIR160e_MI0005901_Physcomitrella_patens_miR160e_stem-loop_138      44   1e-05
ppt-MIR160i_MI0005905_Physcomitrella_patens_miR160i_stem-loop_139      42   4e-05
vun-MIR160_MI0019568_Vigna_unguiculata_miR160_stem-loop_117            42   4e-05
aau-MIR160_MI0018979_Acacia_auriculiformis_miR160_stem-loop_88         42   4e-05
mtr-MIR160e_MI0005629_Medicago_truncatula_miR160e_stem-loop_91         42   4e-05
gma-MIR160b_MI0017821_Glycine_max_miR160b_stem-loop_90                 42   4e-05
gma-MIR160c_MI0017822_Glycine_max_miR160c_stem-loop_91                 42   4e-05
ptc-MIR160b_MI0002202_Populus_trichocarpa_miR160b_stem-loop_98         42   4e-05
gma-MIR160e_MI0017824_Glycine_max_miR160e_stem-loop_90                 42   4e-05
rco-MIR160a_MI0013379_Ricinus_communis_miR160a_stem-loop_92            42   4e-05
smo-MIR160a_MI0006051_Selaginella_moellendorffii_miR160a_stem-lo...    42   4e-05
mtr-MIR160b_MI0005574_Medicago_truncatula_miR160b_stem-loop_91         42   4e-05
mtr-MIR160d_MI0005615_Medicago_truncatula_miR160d_stem-loop_91         42   4e-05
mdm-MIR160c_MI0023006_88                                               42   4e-05
aqc-MIR160b_MI0012072_Aquilegia_caerulea_miR160b_stem-loop_82          42   4e-05
mdm-MIR160e_MI0023008_88                                               42   4e-05
gma-MIR160d_MI0017823_Glycine_max_miR160d_stem-loop_91                 42   4e-05
gma-MIR160_MI0001774_Glycine_max_miR160_stem-loop_119                  42   4e-05
ptc-MIR160c_MI0002203_Populus_trichocarpa_miR160c_stem-loop_98         42   4e-05
mtr-MIR160_MI0001739_Medicago_truncatula_miR160_stem-loop_119          42   4e-05
csi-MIR160_MI0013294_Citrus_sinensis_miR160_stem-loop_143              42   4e-05
pab-MIR160b_MI0016117_Picea_abies_miR160b_stem-loop_116                42   4e-05
ppt-MIR160b_MI0005656_Physcomitrella_patens_miR160b_stem-loop_103      40   2e-04

>mdm-MIR160b_MI0023005_89
          Length = 89

 Score =  176 bits (89), Expect = 1e-45
 Identities = 89/89 (100%)
 Strand = Plus / Plus

                                                                       
Query: 29  ttatgcctggctccctgtatgccacaagcagaagttcaatctgtttctcgattggctatt 88
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ttatgcctggctccctgtatgccacaagcagaagttcaatctgtttctcgattggctatt 60

                                        
Query: 89  gcgggtggcgtatgaggagtcaagcatag 117
           |||||||||||||||||||||||||||||
Sbjct: 61  gcgggtggcgtatgaggagtcaagcatag 89


>mdm-MIR160d_MI0023007_89
          Length = 89

 Score =  176 bits (89), Expect = 1e-45
 Identities = 89/89 (100%)
 Strand = Plus / Plus

                                                                       
Query: 29  ttatgcctggctccctgtatgccacaagcagaagttcaatctgtttctcgattggctatt 88
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ttatgcctggctccctgtatgccacaagcagaagttcaatctgtttctcgattggctatt 60

                                        
Query: 89  gcgggtggcgtatgaggagtcaagcatag 117
           |||||||||||||||||||||||||||||
Sbjct: 61  gcgggtggcgtatgaggagtcaagcatag 89


>mdm-MIR160a_MI0023004_83
          Length = 83

 Score = 99.6 bits (50), Expect = 2e-22
 Identities = 78/87 (89%), Gaps = 4/87 (4%)
 Strand = Plus / Plus

                                                                       
Query: 30  tatgcctggctccctgtatgccacaagcagaagttcaatctgtttctcgattggctattg 89
           ||||||||||||||||||||||||||||||||||||||    ||||| ||||||||||||
Sbjct: 1   tatgcctggctccctgtatgccacaagcagaagttcaa----tttcttgattggctattg 56

                                      
Query: 90  cgggtggcgtatgaggagtcaagcata 116
            ||||||||||  ||||| ||||||||
Sbjct: 57  tgggtggcgtacaaggagccaagcata 83


>rco-MIR160b_MI0013380_Ricinus_communis_miR160b_stem-loop_96
          Length = 96

 Score = 69.9 bits (35), Expect = 2e-13
 Identities = 78/91 (85%), Gaps = 1/91 (1%)
 Strand = Plus / Plus

                                                                       
Query: 27  ggttatgcctggctccctgtatgccacaagcagaagttcaatctgtttc-tcgattggct 85
           |||||||||||||||||||||||||||||||   |||||| ||  || | | ||||||||
Sbjct: 1   ggttatgcctggctccctgtatgccacaagctagagttcattcccttccatggattggct 60

                                          
Query: 86  attgcgggtggcgtatgaggagtcaagcata 116
           ||||| ||||||||  |||||| ||||||||
Sbjct: 61  attgccggtggcgtgcgaggagccaagcata 91


>ptc-MIR160a_MI0002201_Populus_trichocarpa_miR160a_stem-loop_102
          Length = 102

 Score = 69.9 bits (35), Expect = 2e-13
 Identities = 81/94 (86%), Gaps = 3/94 (3%)
 Strand = Plus / Plus

                                                                       
Query: 25  tgggttatgcctggctccctgtatgccacaagcagaagttcaatctgt--ttctcgattg 82
           |||||||||||||||||||||||||||||||||| |||  |||||| |  || | |||||
Sbjct: 4   tgggttatgcctggctccctgtatgccacaagca-aagaccaatcttttgttttagattg 62

                                             
Query: 83  gctattgcgggtggcgtatgaggagtcaagcata 116
           ||| |||| ||||||||  |||||| ||||||||
Sbjct: 63  gctgttgccggtggcgtgcgaggagccaagcata 96


>ptc-MIR160d_MI0002204_Populus_trichocarpa_miR160d_stem-loop_103
          Length = 103

 Score = 60.0 bits (30), Expect = 2e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                        
Query: 25 tgggttatgcctggctccctgtatgccaca 54
          ||||||||||||||||||||||||||||||
Sbjct: 4  tgggttatgcctggctccctgtatgccaca 33


>ath-MIR160c_MI0000192_Arabidopsis_thaliana_miR160c_stem-loop_89
          Length = 89

 Score = 52.0 bits (26), Expect = 5e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 28 gttatgcctggctccctgtatgccac 53
          ||||||||||||||||||||||||||
Sbjct: 1  gttatgcctggctccctgtatgccac 26


>aly-MIR160c_MI0014523_Arabidopsis_lyrata_miR160c_stem-loop_119
          Length = 119

 Score = 52.0 bits (26), Expect = 5e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 28 gttatgcctggctccctgtatgccac 53
          ||||||||||||||||||||||||||
Sbjct: 20 gttatgcctggctccctgtatgccac 45


>vvi-MIR160c_MI0006498_Vitis_vinifera_miR160c_stem-loop_106
          Length = 106

 Score = 52.0 bits (26), Expect = 5e-08
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                        
Query: 25 tgggttatgcctggctccctgtatgccaca 54
          |||||| |||||||||||||||||||||||
Sbjct: 4  tgggttgtgcctggctccctgtatgccaca 33


>tae-MIR160_MI0006172_Triticum_aestivum_miR160_stem-loop_148
          Length = 148

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 25 tgggttatgcctggctccctgtatgccac 53
          |||| ||||||||||||||||||||||||
Sbjct: 15 tgggatatgcctggctccctgtatgccac 43


>bdi-MIR160a_MI0018086_Brachypodium_distachyon_miR160a_stem-
          loop_175
          Length = 175

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 25 tgggttatgcctggctccctgtatgccac 53
          |||| ||||||||||||||||||||||||
Sbjct: 25 tgggatatgcctggctccctgtatgccac 53


>aly-MIR160b_MI0014522_Arabidopsis_lyrata_miR160b_stem-loop_125
          Length = 125

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 32 tgcctggctccctgtatgccacaag 56
          |||||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccacaag 45


>ath-MIR160b_MI0000191_Arabidopsis_thaliana_miR160b_stem-loop_89
          Length = 89

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 32 tgcctggctccctgtatgccacaag 56
          |||||||||||||||||||||||||
Sbjct: 5  tgcctggctccctgtatgccacaag 29


>osa-MIR160d_MI0000666_Oryza_sativa_miR160d_stem-loop_142
          Length = 142

 Score = 48.1 bits (24), Expect = 7e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 30 tatgcctggctccctgtatgccac 53
          ||||||||||||||||||||||||
Sbjct: 6  tatgcctggctccctgtatgccac 29


>zma-MIR160e_MI0001479_Zea_mays_miR160e_stem-loop_94
          Length = 94

 Score = 48.1 bits (24), Expect = 7e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 30 tatgcctggctccctgtatgccac 53
          ||||||||||||||||||||||||
Sbjct: 7  tatgcctggctccctgtatgccac 30


>far-MIR160_MI0016604_Festuca_arundinacea_miR160_stem-loop_148
          Length = 148

 Score = 48.1 bits (24), Expect = 7e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 31 atgcctggctccctgtatgccaca 54
          ||||||||||||||||||||||||
Sbjct: 52 atgcctggctccctgtatgccaca 75


>zma-MIR160d_MI0001467_Zea_mays_miR160d_stem-loop_142
          Length = 142

 Score = 48.1 bits (24), Expect = 7e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 30 tatgcctggctccctgtatgccac 53
          ||||||||||||||||||||||||
Sbjct: 19 tatgcctggctccctgtatgccac 42


>zma-MIR160g_MI0013192_Zea_mays_miR160g_stem-loop_86
          Length = 86

 Score = 48.1 bits (24), Expect = 7e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 31 atgcctggctccctgtatgccaca 54
          ||||||||||||||||||||||||
Sbjct: 1  atgcctggctccctgtatgccaca 24


>tcc-MIR160b_MI0017461_Theobroma_cacao_miR160b_stem-loop_120
          Length = 120

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 30 tatgcctggctccctgtatgcca 52
          |||||||||||||||||||||||
Sbjct: 19 tatgcctggctccctgtatgcca 41


>bra-MIR160a_MI0010650_Brassica_rapa_miR160a_stem-loop_127
          Length = 127

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 30 tatgcctggctccctgtatgcca 52
          |||||||||||||||||||||||
Sbjct: 24 tatgcctggctccctgtatgcca 46


>vvi-MIR160e_MI0006501_Vitis_vinifera_miR160e_stem-loop_102
          Length = 102

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 30 tatgcctggctccctgtatgcca 52
          |||||||||||||||||||||||
Sbjct: 9  tatgcctggctccctgtatgcca 31


>sly-MIR160a_MI0008357_Solanum_lycopersicum_miR160a_stem-loop_129
          Length = 129

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 30 tatgcctggctccctgtatgcca 52
          |||||||||||||||||||||||
Sbjct: 18 tatgcctggctccctgtatgcca 40



 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 94  tggcgtatgaggagtcaagcata 116
           |||||||||||||| ||||||||
Sbjct: 82  tggcgtatgaggagccaagcata 104


>bdi-MIR160b_MI0018093_Brachypodium_distachyon_miR160b_stem-
          loop_146
          Length = 146

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 32 tgcctggctccctgtatgccaca 54
          |||||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgccaca 53


>aly-MIR160a_MI0014521_Arabidopsis_lyrata_miR160a_stem-loop_158
          Length = 158

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 30 tatgcctggctccctgtatgcca 52
          |||||||||||||||||||||||
Sbjct: 40 tatgcctggctccctgtatgcca 62


>pab-MIR160a_MI0016116_Picea_abies_miR160a_stem-loop_106
          Length = 106

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 32 tgcctggctccctgtatgccaca 54
          |||||||||||||||||||||||
Sbjct: 14 tgcctggctccctgtatgccaca 36


>zma-MIR160a_MI0001465_Zea_mays_miR160a_stem-loop_104
          Length = 104

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 32 tgcctggctccctgtatgccaca 54
          |||||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgccaca 32


>ath-MIR160a_MI0000190_Arabidopsis_thaliana_miR160a_stem-loop_85
          Length = 85

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 30 tatgcctggctccctgtatgcca 52
          |||||||||||||||||||||||
Sbjct: 2  tatgcctggctccctgtatgcca 24


>sbi-MIR160b_MI0001510_Sorghum_bicolor_miR160b_stem-loop_82
          Length = 82

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 32 tgcctggctccctgtatgccaca 54
          |||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccaca 23


>bdi-MIR160c_MI0018100_Brachypodium_distachyon_miR160c_stem-
          loop_148
          Length = 148

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 32 tgcctggctccctgtatgccaca 54
          |||||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgccaca 53


>osa-MIR160a_MI0000663_Oryza_sativa_miR160a_stem-loop_88
          Length = 88

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 32 tgcctggctccctgtatgccaca 54
          |||||||||||||||||||||||
Sbjct: 4  tgcctggctccctgtatgccaca 26


>zma-MIR160b_MI0001468_Zea_mays_miR160b_stem-loop_121
          Length = 121

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 32 tgcctggctccctgtatgccaca 54
          |||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccaca 43


>sbi-MIR160a_MI0001508_Sorghum_bicolor_miR160a_stem-loop_84
          Length = 84

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 32 tgcctggctccctgtatgccaca 54
          |||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccaca 23


>ppt-MIR160a_MI0005655_Physcomitrella_patens_miR160a_stem-loop_99
          Length = 99

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 32 tgcctggctccctgtatgccac 53
          ||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32


>zma-MIR160f_MI0001848_Zea_mays_miR160f_stem-loop_116
          Length = 116

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 30 tatgcctggctccctgtatgcc 51
          ||||||||||||||||||||||
Sbjct: 19 tatgcctggctccctgtatgcc 40


>vvi-MIR160d_MI0006499_Vitis_vinifera_miR160d_stem-loop_102
          Length = 102

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 31 atgcctggctccctgtatgcca 52
          ||||||||||||||||||||||
Sbjct: 10 atgcctggctccctgtatgcca 31


>osa-MIR160b_MI0000664_Oryza_sativa_miR160b_stem-loop_139
          Length = 139

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 32 tgcctggctccctgtatgccac 53
          ||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51


>zma-MIR160c_MI0001466_Zea_mays_miR160c_stem-loop_100
          Length = 100

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 32 tgcctggctccctgtatgccac 53
          ||||||||||||||||||||||
Sbjct: 7  tgcctggctccctgtatgccac 28


>sbi-MIR160c_MI0001509_Sorghum_bicolor_miR160c_stem-loop_83
          Length = 83

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 32 tgcctggctccctgtatgccac 53
          ||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccac 22


>smo-MIR160b_MI0006052_Selaginella_moellendorffii_miR160b_stem-
          loop_108
          Length = 108

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 32 tgcctggctccctgtatgccac 53
          ||||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgccac 34


>sbi-MIR160e_MI0001511_Sorghum_bicolor_miR160e_stem-loop_95
          Length = 95

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 32 tgcctggctccctgtatgccac 53
          ||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccac 22


>sbi-MIR160d_MI0001507_Sorghum_bicolor_miR160d_stem-loop_100
          Length = 100

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 32 tgcctggctccctgtatgccac 53
          ||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccac 22


>bdi-MIR160d_MI0018106_Brachypodium_distachyon_miR160d_stem-
          loop_150
          Length = 150

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 32 tgcctggctccctgtatgccac 53
          ||||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgccac 52


>osa-MIR160e_MI0001100_Oryza_sativa_miR160e_stem-loop_114
          Length = 114

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 30 tatgcctggctccctgtatgcc 51
          ||||||||||||||||||||||
Sbjct: 9  tatgcctggctccctgtatgcc 30


>ttu-MIR160_MI0016454_Triticum_turgidum_miR160_stem-loop_100
          Length = 100

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 32 tgcctggctccctgtatgccac 53
          ||||||||||||||||||||||
Sbjct: 9  tgcctggctccctgtatgccac 30


>osa-MIR160c_MI0000665_Oryza_sativa_miR160c_stem-loop_99
          Length = 99

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 32 tgcctggctccctgtatgccac 53
          ||||||||||||||||||||||
Sbjct: 7  tgcctggctccctgtatgccac 28


>ppt-MIR160f_MI0005902_Physcomitrella_patens_miR160f_stem-loop_138
          Length = 138

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 32 tgcctggctccctgtatgccac 53
          ||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51


>ppt-MIR160e_MI0005901_Physcomitrella_patens_miR160e_stem-loop_138
          Length = 138

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 32 tgcctggctccctgtatgccac 53
          ||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51


>ppt-MIR160i_MI0005905_Physcomitrella_patens_miR160i_stem-loop_139
          Length = 139

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 33 gcctggctccctgtatgccac 53
          |||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51


>vun-MIR160_MI0019568_Vigna_unguiculata_miR160_stem-loop_117
          Length = 117

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 32 tgcctggctccctgtatgcca 52
          |||||||||||||||||||||
Sbjct: 18 tgcctggctccctgtatgcca 38


>aau-MIR160_MI0018979_Acacia_auriculiformis_miR160_stem-loop_88
          Length = 88

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 32 tgcctggctccctgtatgcca 52
          |||||||||||||||||||||
Sbjct: 84 tgcctggctccctgtatgcca 64


>mtr-MIR160e_MI0005629_Medicago_truncatula_miR160e_stem-loop_91
          Length = 91

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 32 tgcctggctccctgtatgcca 52
          |||||||||||||||||||||
Sbjct: 6  tgcctggctccctgtatgcca 26



 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 94  tggcgtatgaggagtcaagcata 116
           |||||||||||||| ||||||||
Sbjct: 65  tggcgtatgaggagccaagcata 87


>gma-MIR160b_MI0017821_Glycine_max_miR160b_stem-loop_90
          Length = 90

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 32 tgcctggctccctgtatgcca 52
          |||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgcca 30



 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 94  tggcgtatgaggagtcaagcata 116
           |||||||||||||| ||||||||
Sbjct: 68  tggcgtatgaggagccaagcata 90


>gma-MIR160c_MI0017822_Glycine_max_miR160c_stem-loop_91
          Length = 91

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 32 tgcctggctccctgtatgcca 52
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21


>ptc-MIR160b_MI0002202_Populus_trichocarpa_miR160b_stem-loop_98
          Length = 98

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 32 tgcctggctccctgtatgcca 52
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31


>gma-MIR160e_MI0017824_Glycine_max_miR160e_stem-loop_90
          Length = 90

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 32 tgcctggctccctgtatgcca 52
          |||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgcca 30


>rco-MIR160a_MI0013379_Ricinus_communis_miR160a_stem-loop_92
          Length = 92

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 32 tgcctggctccctgtatgcca 52
          |||||||||||||||||||||
Sbjct: 6  tgcctggctccctgtatgcca 26


>smo-MIR160a_MI0006051_Selaginella_moellendorffii_miR160a_stem-
          loop_106
          Length = 106

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 32 tgcctggctccctgtatgcca 52
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31


>mtr-MIR160b_MI0005574_Medicago_truncatula_miR160b_stem-loop_91
          Length = 91

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 32 tgcctggctccctgtatgcca 52
          |||||||||||||||||||||
Sbjct: 6  tgcctggctccctgtatgcca 26



 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 94  tggcgtatgaggagtcaagcata 116
           |||||||||||||| ||||||||
Sbjct: 65  tggcgtatgaggagccaagcata 87


>mtr-MIR160d_MI0005615_Medicago_truncatula_miR160d_stem-loop_91
          Length = 91

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 32 tgcctggctccctgtatgcca 52
          |||||||||||||||||||||
Sbjct: 6  tgcctggctccctgtatgcca 26


>mdm-MIR160c_MI0023006_88
          Length = 88

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 32 tgcctggctccctgtatgcca 52
          |||||||||||||||||||||
Sbjct: 5  tgcctggctccctgtatgcca 25



 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 94  tggcgtatgaggagtcaagcata 116
           |||||||||||||| ||||||||
Sbjct: 64  tggcgtatgaggagccaagcata 86


>aqc-MIR160b_MI0012072_Aquilegia_caerulea_miR160b_stem-loop_82
          Length = 82

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 32 tgcctggctccctgtatgcca 52
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21


>mdm-MIR160e_MI0023008_88
          Length = 88

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 32 tgcctggctccctgtatgcca 52
          |||||||||||||||||||||
Sbjct: 5  tgcctggctccctgtatgcca 25


>gma-MIR160d_MI0017823_Glycine_max_miR160d_stem-loop_91
          Length = 91

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 32 tgcctggctccctgtatgcca 52
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21


>gma-MIR160_MI0001774_Glycine_max_miR160_stem-loop_119
          Length = 119

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 32 tgcctggctccctgtatgcca 52
          |||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41



 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 94  tggcgtatgaggagtcaagcata 116
           |||||||||||||| ||||||||
Sbjct: 80  tggcgtatgaggagccaagcata 102


>ptc-MIR160c_MI0002203_Populus_trichocarpa_miR160c_stem-loop_98
          Length = 98

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 32 tgcctggctccctgtatgcca 52
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31


>mtr-MIR160_MI0001739_Medicago_truncatula_miR160_stem-loop_119
          Length = 119

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 32 tgcctggctccctgtatgcca 52
          |||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41


>csi-MIR160_MI0013294_Citrus_sinensis_miR160_stem-loop_143
          Length = 143

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 32 tgcctggctccctgtatgcca 52
          |||||||||||||||||||||
Sbjct: 33 tgcctggctccctgtatgcca 53


>pab-MIR160b_MI0016117_Picea_abies_miR160b_stem-loop_116
          Length = 116

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 32 tgcctggctccctgtatgcca 52
          |||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40


>ppt-MIR160b_MI0005656_Physcomitrella_patens_miR160b_stem-loop_103
          Length = 103

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 33 gcctggctccctgtatgcca 52
          ||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.