(305 letters)

Database: hairpin_length.fa 
           18,432 sequences; 1,887,117 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mdm-MIR7124b_MI0023159_198                                            392   e-110
mdm-MIR7124a_MI0023158_152                                            301   7e-83

>mdm-MIR7124b_MI0023159_198
          Length = 198

 Score =  392 bits (198), Expect = e-110
 Identities = 198/198 (100%)
 Strand = Plus / Plus

                                                                       
Query: 55  attaagctaataacattatataggacacaccaatatcaactttatttgttcattaatact 114
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   attaagctaataacattatataggacacaccaatatcaactttatttgttcattaatact 60

                                                                       
Query: 115 tataaagtcattacactagaattttctttgaaagaaaattctagtgtattgactttataa 174
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tataaagtcattacactagaattttctttgaaagaaaattctagtgtattgactttataa 120

                                                                       
Query: 175 gtattaatggctttggtattaattaatgaacaaataaagttgatattggtgtgtcgtcta 234
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtattaatggctttggtattaattaatgaacaaataaagttgatattggtgtgtcgtcta 180

                             
Query: 235 taatgtcattagcttaat 252
           ||||||||||||||||||
Sbjct: 181 taatgtcattagcttaat 198



 Score =  133 bits (67), Expect = 3e-32
 Identities = 76/79 (96%)
 Strand = Plus / Minus

                                                                       
Query: 105 cattaatacttataaagtcattacactagaattttctttgaaagaaaattctagtgtatt 164
           |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |
Sbjct: 129 cattaatacttataaagtcaatacactagaattttctttcaaagaaaattctagtgtaat 70

                              
Query: 165 gactttataagtattaatg 183
           |||||||||||||||||||
Sbjct: 69  gactttataagtattaatg 51


>mdm-MIR7124a_MI0023158_152
          Length = 152

 Score =  301 bits (152), Expect = 7e-83
 Identities = 152/152 (100%)
 Strand = Plus / Plus

                                                                       
Query: 78  gacacaccaatatcaactttatttgttcattaatacttataaagtcattacactagaatt 137
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gacacaccaatatcaactttatttgttcattaatacttataaagtcattacactagaatt 60

                                                                       
Query: 138 ttctttgaaagaaaattctagtgtattgactttataagtattaatggctttggtattaat 197
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ttctttgaaagaaaattctagtgtattgactttataagtattaatggctttggtattaat 120

                                           
Query: 198 taatgaacaaataaagttgatattggtgtgtc 229
           ||||||||||||||||||||||||||||||||
Sbjct: 121 taatgaacaaataaagttgatattggtgtgtc 152



 Score =  133 bits (67), Expect = 3e-32
 Identities = 76/79 (96%)
 Strand = Plus / Minus

                                                                       
Query: 105 cattaatacttataaagtcattacactagaattttctttgaaagaaaattctagtgtatt 164
           |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |
Sbjct: 106 cattaatacttataaagtcaatacactagaattttctttcaaagaaaattctagtgtaat 47

                              
Query: 165 gactttataagtattaatg 183
           |||||||||||||||||||
Sbjct: 46  gactttataagtattaatg 28


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.