(168 letters)

Database: hairpin_length.fa 
           18,432 sequences; 1,887,117 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mdm-MIR171k_MI0023052_99                                              196   1e-51
mdm-MIR171l_MI0023053_99                                              196   1e-51
mdm-MIR171j_MI0023051_89                                              141   8e-35
tcc-MIR171c_MI0017491_Theobroma_cacao_miR171c_stem-loop_123           109   3e-25
ptc-MIR171d_MI0002280_Populus_trichocarpa_miR171d_stem-loop_100        88   1e-18
rco-MIR171g_MI0013404_Ricinus_communis_miR171g_stem-loop_89            82   6e-17
gma-MIR171k_MI0018667_Glycine_max_miR171k_stem-loop_98                 80   2e-16
ptc-MIR171c_MI0002279_Populus_trichocarpa_miR171c_stem-loop_104        80   2e-16
gma-MIR171l_MI0018687_Glycine_max_miR171l_stem-loop_98                 80   2e-16
mtr-MIR171e_MI0005620_Medicago_truncatula_miR171e_stem-loop_93         74   1e-14
vvi-MIR171e_MI0006540_Vitis_vinifera_miR171e_stem-loop_103             70   2e-13
vvi-MIR171f_MI0006541_Vitis_vinifera_miR171f_stem-loop_103             66   4e-12
tcc-MIR171b_MI0017490_Theobroma_cacao_miR171b_stem-loop_120            62   6e-11
sly-MIR171d_MI0008368_Solanum_lycopersicum_miR171d_stem-loop_112       62   6e-11
ssl-MIR171b_MI0019347_Salvia_sclarea_miR171b_stem-loop_88              60   2e-10
ppt-MIR171b_MI0005689_Physcomitrella_patens_miR171b_stem-loop_92       52   5e-08
ppt-MIR171a_MI0005688_Physcomitrella_patens_miR171a_stem-loop_91       50   2e-07
sbi-MIR171j_MI0010883_Sorghum_bicolor_miR171j_stem-loop_108            48   8e-07
smo-MIR171d_MI0006059_Selaginella_moellendorffii_miR171d_stem-lo...    46   3e-06
sly-MIR171c_MI0008367_Solanum_lycopersicum_miR171c_stem-loop_121       44   1e-05
osa-MIR171a_MI0000680_Oryza_sativa_miR171a_stem-loop_96                44   1e-05
csi-MIR171a_MI0016699_Citrus_sinensis_miR171a_stem-loop_97             44   1e-05
ccl-MIR171_MI0013301_Citrus_clementine_miR171_stem-loop_321            44   1e-05
bna-MIR171f_MI0006455_Brassica_napus_miR171f_stem-loop_119             40   2e-04
zma-MIR171a_MI0001491_Zea_mays_miR171a_stem-loop_99                    40   2e-04
ptc-MIR171k_MI0005114_Populus_trichocarpa_miR171k_stem-loop_78         40   2e-04
smo-MIR171a_MI0006056_Selaginella_moellendorffii_miR171a_stem-lo...    40   2e-04
tcc-MIR171a_MI0017489_Theobroma_cacao_miR171a_stem-loop_119            40   2e-04
ath-MIR171a_MI0000214_Arabidopsis_thaliana_miR171a_stem-loop_123       40   2e-04
bra-MIR171e_MI0010660_Brassica_rapa_miR171e_stem-loop_119              40   2e-04
bna-MIR171g_MI0005771_Brassica_napus_miR171g_stem-loop_80              40   2e-04
bdi-MIR171a_MI0011559_Brachypodium_distachyon_miR171a_stem-loop_120    40   2e-04
mdm-MIR171c_MI0023044_122                                              40   2e-04
mdm-MIR171e_MI0023046_142                                              40   2e-04
aly-MIR171a_MI0014560_Arabidopsis_lyrata_miR171a_stem-loop_198         40   2e-04
zma-MIR171n_MI0013208_Zea_mays_miR171n_stem-loop_78                    40   2e-04
sbi-MIR171g_MI0010880_Sorghum_bicolor_miR171g_stem-loop_77             40   2e-04
mdm-MIR171d_MI0023045_120                                              40   2e-04
zma-MIR171j_MI0001836_Zea_mays_miR171j_stem-loop_129                   38   8e-04
sbi-MIR171b_MI0001564_Sorghum_bicolor_miR171b_stem-loop_132            38   8e-04

>mdm-MIR171k_MI0023052_99
          Length = 99

 Score =  196 bits (99), Expect = 1e-51
 Identities = 99/99 (100%)
 Strand = Plus / Plus

                                                                       
Query: 36  gagaaagcgatgttggtgaggttcaatccgaagacagatttacacatccctgctggcgta 95
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gagaaagcgatgttggtgaggttcaatccgaagacagatttacacatccctgctggcgta 60

                                                  
Query: 96  aattgatctcagattgagccgcgccaatatcactttctt 134
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aattgatctcagattgagccgcgccaatatcactttctt 99


>mdm-MIR171l_MI0023053_99
          Length = 99

 Score =  196 bits (99), Expect = 1e-51
 Identities = 99/99 (100%)
 Strand = Plus / Plus

                                                                       
Query: 36  gagaaagcgatgttggtgaggttcaatccgaagacagatttacacatccctgctggcgta 95
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gagaaagcgatgttggtgaggttcaatccgaagacagatttacacatccctgctggcgta 60

                                                  
Query: 96  aattgatctcagattgagccgcgccaatatcactttctt 134
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aattgatctcagattgagccgcgccaatatcactttctt 99


>mdm-MIR171j_MI0023051_89
          Length = 89

 Score =  141 bits (71), Expect = 8e-35
 Identities = 84/89 (94%)
 Strand = Plus / Plus

                                                                       
Query: 41  agcgatgttggtgaggttcaatccgaagacagatttacacatccctgctggcgtaaattg 100
           |||||||||||||||||||||||||||||||||||| ||||| || ||  ||||||||||
Sbjct: 1   agcgatgttggtgaggttcaatccgaagacagatttgcacatycccgcccgcgtaaattg 60

                                        
Query: 101 atctcagattgagccgcgccaatatcact 129
           |||||||||||||||||||||||||||||
Sbjct: 61  atctcagattgagccgcgccaatatcact 89


>tcc-MIR171c_MI0017491_Theobroma_cacao_miR171c_stem-loop_123
          Length = 123

 Score =  109 bits (55), Expect = 3e-25
 Identities = 88/98 (89%), Gaps = 2/98 (2%)
 Strand = Plus / Plus

                                                                       
Query: 37  agaaagcgatgttggtgaggttcaatccgaagacagatttacacatccctgctggcgtaa 96
           |||||||||||||||||||||||||||||||||| ||||||| ||| | | | | |||||
Sbjct: 12  agaaagcgatgttggtgaggttcaatccgaagacggatttacgcatgcattcagtcgtaa 71

                                                 
Query: 97  att--gatctcagattgagccgcgccaatatcactttc 132
           | |  |||||||||||||||||||||||||||||||||
Sbjct: 72  aatacgatctcagattgagccgcgccaatatcactttc 109


>ptc-MIR171d_MI0002280_Populus_trichocarpa_miR171d_stem-loop_100
          Length = 100

 Score = 87.7 bits (44), Expect = 1e-18
 Identities = 44/44 (100%)
 Strand = Plus / Plus

                                                      
Query: 37 agaaagcgatgttggtgaggttcaatccgaagacagatttacac 80
          ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4  agaaagcgatgttggtgaggttcaatccgaagacagatttacac 47


>rco-MIR171g_MI0013404_Ricinus_communis_miR171g_stem-loop_89
          Length = 89

 Score = 81.8 bits (41), Expect = 6e-17
 Identities = 81/93 (87%), Gaps = 6/93 (6%)
 Strand = Plus / Plus

                                                                       
Query: 41  agcgatgttggtgaggttcaatccgaagacagatttacacatccctgctggcgtaaa--t 98
           |||||||||||||||||||||||||||||| ||||||||||    | |||  |||||   
Sbjct: 1   agcgatgttggtgaggttcaatccgaagacggatttacaca----ttctgttgtaaagga 56

                                            
Query: 99  tgatctcagattgagccgcgccaatatcacttt 131
            ||||||||||||||||||||||||||||||||
Sbjct: 57  cgatctcagattgagccgcgccaatatcacttt 89


>gma-MIR171k_MI0018667_Glycine_max_miR171k_stem-loop_98
          Length = 98

 Score = 79.8 bits (40), Expect = 2e-16
 Identities = 43/44 (97%)
 Strand = Plus / Plus

                                                      
Query: 36 gagaaagcgatgttggtgaggttcaatccgaagacagatttaca 79
          ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1  gagaaagcgatgttggtgaggttcaatccgaagacggatttaca 44


>ptc-MIR171c_MI0002279_Populus_trichocarpa_miR171c_stem-loop_104
          Length = 104

 Score = 79.8 bits (40), Expect = 2e-16
 Identities = 43/44 (97%)
 Strand = Plus / Plus

                                                      
Query: 37 agaaagcgatgttggtgaggttcaatccgaagacagatttacac 80
          |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 4  agaaagcgatgttggtgaggttcaatccgaagacggatttacac 47


>gma-MIR171l_MI0018687_Glycine_max_miR171l_stem-loop_98
          Length = 98

 Score = 79.8 bits (40), Expect = 2e-16
 Identities = 43/44 (97%)
 Strand = Plus / Plus

                                                      
Query: 36 gagaaagcgatgttggtgaggttcaatccgaagacagatttaca 79
          ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1  gagaaagcgatgttggtgaggttcaatccgaagacggatttaca 44


>mtr-MIR171e_MI0005620_Medicago_truncatula_miR171e_stem-loop_93
          Length = 93

 Score = 73.8 bits (37), Expect = 1e-14
 Identities = 40/41 (97%)
 Strand = Plus / Plus

                                                   
Query: 39 aaagcgatgttggtgaggttcaatccgaagacagatttaca 79
          |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1  aaagcgatgttggtgaggttcaatccgaagacggatttaca 41


>vvi-MIR171e_MI0006540_Vitis_vinifera_miR171e_stem-loop_103
          Length = 103

 Score = 69.9 bits (35), Expect = 2e-13
 Identities = 38/39 (97%)
 Strand = Plus / Plus

                                                 
Query: 40 aagcgatgttggtgaggttcaatccgaagacagatttac 78
          ||||||||||||||||||||||||||||||| |||||||
Sbjct: 8  aagcgatgttggtgaggttcaatccgaagacggatttac 46



 Score = 60.0 bits (30), Expect = 2e-10
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                             
Query: 100 gatctcagattgagccgcgccaatatcactttct 133
           |||||| |||||||||||||||||||||||||||
Sbjct: 64  gatctctgattgagccgcgccaatatcactttct 97


>vvi-MIR171f_MI0006541_Vitis_vinifera_miR171f_stem-loop_103
          Length = 103

 Score = 65.9 bits (33), Expect = 4e-12
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                            
Query: 99  tgatctcagattgagccgcgccaatatcacttt 131
           |||||||||||||||||||||||||||||||||
Sbjct: 63  tgatctcagattgagccgcgccaatatcacttt 95


>tcc-MIR171b_MI0017490_Theobroma_cacao_miR171b_stem-loop_120
          Length = 120

 Score = 61.9 bits (31), Expect = 6e-11
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 104 tcagattgagccgcgccaatatcactttctt 134
           |||||||||||||||||||||||||||||||
Sbjct: 78  tcagattgagccgcgccaatatcactttctt 108



 Score = 48.1 bits (24), Expect = 8e-07
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 42 gcgatgttggtgaggttcaatccgaaga 69
          |||||||||||||||||||||| |||||
Sbjct: 19 gcgatgttggtgaggttcaatctgaaga 46


>sly-MIR171d_MI0008368_Solanum_lycopersicum_miR171d_stem-loop_112
          Length = 112

 Score = 61.9 bits (31), Expect = 6e-11
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                         
Query: 40 aagcgatgttggtgaggttcaatccgaagac 70
          |||||||||||||||||||||||||||||||
Sbjct: 8  aagcgatgttggtgaggttcaatccgaagac 38



 Score = 61.9 bits (31), Expect = 6e-11
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 100 gatctcagattgagccgcgccaatatcactt 130
           |||||||||||||||||||||||||||||||
Sbjct: 66  gatctcagattgagccgcgccaatatcactt 96


>ssl-MIR171b_MI0019347_Salvia_sclarea_miR171b_stem-loop_88
          Length = 88

 Score = 60.0 bits (30), Expect = 2e-10
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                
Query: 41 agcgatgttggtgaggttcaatccgaagacagatttac 78
          |||||| ||||||||||||||||||||||| |||||||
Sbjct: 1  agcgatattggtgaggttcaatccgaagacggatttac 38



 Score = 60.0 bits (30), Expect = 2e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 100 gatctcagattgagccgcgccaatatcact 129
           ||||||||||||||||||||||||||||||
Sbjct: 59  gatctcagattgagccgcgccaatatcact 88


>ppt-MIR171b_MI0005689_Physcomitrella_patens_miR171b_stem-loop_92
          Length = 92

 Score = 52.0 bits (26), Expect = 5e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 103 ctcagattgagccgcgccaatatcac 128
           ||||||||||||||||||||||||||
Sbjct: 61  ctcagattgagccgcgccaatatcac 86


>ppt-MIR171a_MI0005688_Physcomitrella_patens_miR171a_stem-loop_91
          Length = 91

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 104 tcagattgagccgcgccaatatcac 128
           |||||||||||||||||||||||||
Sbjct: 61  tcagattgagccgcgccaatatcac 85


>sbi-MIR171j_MI0010883_Sorghum_bicolor_miR171j_stem-loop_108
          Length = 108

 Score = 48.1 bits (24), Expect = 8e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 107 gattgagccgcgccaatatcactt 130
           ||||||||||||||||||||||||
Sbjct: 84  gattgagccgcgccaatatcactt 107



 Score = 38.2 bits (19), Expect = 8e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 41 agcgatgttggtgaggttcaatc 63
          |||||| ||||||||||||||||
Sbjct: 4  agcgatattggtgaggttcaatc 26


>smo-MIR171d_MI0006059_Selaginella_moellendorffii_miR171d_stem-
           loop_103
          Length = 103

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 102 tctcagattgagccgcgccaatatcac 128
           ||||| |||||||||||||||||||||
Sbjct: 65  tctcaaattgagccgcgccaatatcac 91


>sly-MIR171c_MI0008367_Solanum_lycopersicum_miR171c_stem-loop_121
          Length = 121

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 107 gattgagccgcgccaatatcac 128
           ||||||||||||||||||||||
Sbjct: 79  gattgagccgcgccaatatcac 100


>osa-MIR171a_MI0000680_Oryza_sativa_miR171a_stem-loop_96
          Length = 96

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 41 agcgatgttggtgaggttcaatccga 66
          |||||| |||||||||||||||||||
Sbjct: 7  agcgatattggtgaggttcaatccga 32



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 107 gattgagccgcgccaatatc 126
           ||||||||||||||||||||
Sbjct: 68  gattgagccgcgccaatatc 87


>csi-MIR171a_MI0016699_Citrus_sinensis_miR171a_stem-loop_97
          Length = 97

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 107 gattgagccgcgccaatatcac 128
           ||||||||||||||||||||||
Sbjct: 68  gattgagccgcgccaatatcac 89


>ccl-MIR171_MI0013301_Citrus_clementine_miR171_stem-loop_321
          Length = 321

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 107 gattgagccgcgccaatatcac 128
           ||||||||||||||||||||||
Sbjct: 123 gattgagccgcgccaatatcac 144


>bna-MIR171f_MI0006455_Brassica_napus_miR171f_stem-loop_119
          Length = 119

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 107 gattgagccgcgccaatatc 126
           ||||||||||||||||||||
Sbjct: 85  gattgagccgcgccaatatc 104


>zma-MIR171a_MI0001491_Zea_mays_miR171a_stem-loop_99
          Length = 99

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 107 gattgagccgcgccaatatc 126
           ||||||||||||||||||||
Sbjct: 80  gattgagccgcgccaatatc 99


>ptc-MIR171k_MI0005114_Populus_trichocarpa_miR171k_stem-loop_78
          Length = 78

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 107 gattgagccgcgccaatatc 126
           ||||||||||||||||||||
Sbjct: 59  gattgagccgcgccaatatc 78


>smo-MIR171a_MI0006056_Selaginella_moellendorffii_miR171a_stem-
           loop_135
          Length = 135

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 106 agattgagccgcgccaatatcact 129
           ||||||||||| ||||||||||||
Sbjct: 102 agattgagccgtgccaatatcact 125


>tcc-MIR171a_MI0017489_Theobroma_cacao_miR171a_stem-loop_119
          Length = 119

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 107 gattgagccgcgccaatatc 126
           ||||||||||||||||||||
Sbjct: 80  gattgagccgcgccaatatc 99


>ath-MIR171a_MI0000214_Arabidopsis_thaliana_miR171a_stem-loop_123
          Length = 123

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 107 gattgagccgcgccaatatc 126
           ||||||||||||||||||||
Sbjct: 89  gattgagccgcgccaatatc 108


>bra-MIR171e_MI0010660_Brassica_rapa_miR171e_stem-loop_119
          Length = 119

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 107 gattgagccgcgccaatatc 126
           ||||||||||||||||||||
Sbjct: 85  gattgagccgcgccaatatc 104


>bna-MIR171g_MI0005771_Brassica_napus_miR171g_stem-loop_80
          Length = 80

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 107 gattgagccgcgccaatatc 126
           ||||||||||||||||||||
Sbjct: 59  gattgagccgcgccaatatc 78


>bdi-MIR171a_MI0011559_Brachypodium_distachyon_miR171a_stem-loop_120
          Length = 120

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 107 gattgagccgcgccaatatc 126
           ||||||||||||||||||||
Sbjct: 51  gattgagccgcgccaatatc 70


>mdm-MIR171c_MI0023044_122
          Length = 122

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 107 gattgagccgcgccaatatc 126
           ||||||||||||||||||||
Sbjct: 97  gattgagccgcgccaatatc 116


>mdm-MIR171e_MI0023046_142
          Length = 142

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 107 gattgagccgcgccaatatc 126
           ||||||||||||||||||||
Sbjct: 109 gattgagccgcgccaatatc 128


>aly-MIR171a_MI0014560_Arabidopsis_lyrata_miR171a_stem-loop_198
          Length = 198

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 107 gattgagccgcgccaatatc 126
           ||||||||||||||||||||
Sbjct: 131 gattgagccgcgccaatatc 150


>zma-MIR171n_MI0013208_Zea_mays_miR171n_stem-loop_78
          Length = 78

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 107 gattgagccgcgccaatatc 126
           ||||||||||||||||||||
Sbjct: 58  gattgagccgcgccaatatc 77



 Score = 38.2 bits (19), Expect = 8e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 48 ttggtgaggttcaatccga 66
          |||||||||||||||||||
Sbjct: 4  ttggtgaggttcaatccga 22


>sbi-MIR171g_MI0010880_Sorghum_bicolor_miR171g_stem-loop_77
          Length = 77

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 107 gattgagccgcgccaatatc 126
           ||||||||||||||||||||
Sbjct: 58  gattgagccgcgccaatatc 77



 Score = 38.2 bits (19), Expect = 8e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 48 ttggtgaggttcaatccga 66
          |||||||||||||||||||
Sbjct: 3  ttggtgaggttcaatccga 21


>mdm-MIR171d_MI0023045_120
          Length = 120

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 107 gattgagccgcgccaatatc 126
           ||||||||||||||||||||
Sbjct: 101 gattgagccgcgccaatatc 120


>zma-MIR171j_MI0001836_Zea_mays_miR171j_stem-loop_129
          Length = 129

 Score = 38.2 bits (19), Expect = 8e-04
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 102 tctcagattgagccgcgccaatatcac 128
           |||| |||||||||| |||||||||||
Sbjct: 86  tctctgattgagccgtgccaatatcac 112


>sbi-MIR171b_MI0001564_Sorghum_bicolor_miR171b_stem-loop_132
          Length = 132

 Score = 38.2 bits (19), Expect = 8e-04
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 102 tctcagattgagccgcgccaatatcac 128
           |||| |||||||||| |||||||||||
Sbjct: 89  tctctgattgagccgtgccaatatcac 115


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.