(125 letters)

Database: hairpin_length.fa 
           18,432 sequences; 1,887,117 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mdm-MIR164b_MI0023012_118                                             231   3e-62
mdm-MIR164d_MI0023014_135                                              86   2e-18
tcc-MIR164b_MI0017465_Theobroma_cacao_miR164b_stem-loop_130            64   8e-12
ghr-MIR164_MI0013538_Gossypium_hirsutum_miR164_stem-loop_101           54   8e-09
mtr-MIR164a_MI0005573_Medicago_truncatula_miR164a_stem-loop_99         54   8e-09
bdi-MIR164e_MI0018215_Brachypodium_distachyon_miR164e_stem-loop_127    52   3e-08
tcc-MIR164a_MI0017464_Theobroma_cacao_miR164a_stem-loop_128            52   3e-08
mdm-MIR164c_MI0023013_117                                              52   3e-08
ath-MIR164a_MI0000197_Arabidopsis_thaliana_miR164a_stem-loop_113       52   3e-08
bna-MIR164_MI0006478_Brassica_napus_miR164_stem-loop_86                50   1e-07
gma-MIR164b_MI0017826_Glycine_max_miR164b_stem-loop_90                 50   1e-07
mtr-MIR164c_MI0005616_Medicago_truncatula_miR164c_stem-loop_86         50   1e-07
gma-MIR164d_MI0017828_Glycine_max_miR164d_stem-loop_90                 50   1e-07
aly-MIR164a_MI0014527_Arabidopsis_lyrata_miR164a_stem-loop_79          50   1e-07
bra-MIR164a_MI0010651_Brassica_rapa_miR164a_stem-loop_92               50   1e-07
gma-MIR164_MI0007209_Glycine_max_miR164_stem-loop_95                   50   1e-07
vvi-MIR164a_MI0006503_Vitis_vinifera_miR164a_stem-loop_121             48   5e-07
vun-MIR164_MI0019570_Vigna_unguiculata_miR164_stem-loop_72             48   5e-07
sbi-MIR164e_MI0010866_Sorghum_bicolor_miR164e_stem-loop_205            46   2e-06
bdi-MIR164b_MI0018094_Brachypodium_distachyon_miR164b_stem-loop_209    46   2e-06
osa-MIR164c_MI0001103_Oryza_sativa_miR164c_stem-loop_119               46   2e-06
rco-MIR164b_MI0013383_Ricinus_communis_miR164b_stem-loop_104           46   2e-06
osa-MIR164a_MI0000668_Oryza_sativa_miR164a_stem-loop_156               46   2e-06
ptc-MIR164a_MI0002212_Populus_trichocarpa_miR164a_stem-loop_85         46   2e-06
bdi-MIR164d_MI0018214_Brachypodium_distachyon_miR164d_stem-loop_186    46   2e-06
ptc-MIR164d_MI0002215_Populus_trichocarpa_miR164d_stem-loop_99         46   2e-06
mtr-MIR164b_MI0005612_Medicago_truncatula_miR164b_stem-loop_144        44   8e-06
ptc-MIR164c_MI0002214_Populus_trichocarpa_miR164c_stem-loop_82         44   8e-06
zma-MIR164g_MI0013195_Zea_mays_miR164g_stem-loop_171                   44   8e-06
gma-MIR164c_MI0017827_Glycine_max_miR164c_stem-loop_90                 44   8e-06
rco-MIR164a_MI0013382_Ricinus_communis_miR164a_stem-loop_78            44   8e-06
zma-MIR164b_MI0001471_Zea_mays_miR164b_stem-loop_128                   44   8e-06
sbi-MIR164b_MI0001549_Sorghum_bicolor_miR164b_stem-loop_111            42   3e-05
zma-MIR164a_MI0001469_Zea_mays_miR164a_stem-loop_152                   42   3e-05
rco-MIR164c_MI0013384_Ricinus_communis_miR164c_stem-loop_116           42   3e-05
ptc-MIR164b_MI0002213_Populus_trichocarpa_miR164b_stem-loop_162        42   3e-05
aly-MIR164b_MI0014528_Arabidopsis_lyrata_miR164b_stem-loop_161         42   3e-05
ptc-MIR164e_MI0002216_Populus_trichocarpa_miR164e_stem-loop_155        42   3e-05
tae-MIR164_MI0006173_Triticum_aestivum_miR164_stem-loop_156            42   3e-05
sbi-MIR164d_MI0010865_Sorghum_bicolor_miR164d_stem-loop_160            42   3e-05
osa-MIR164f_MI0001159_Oryza_sativa_miR164f_stem-loop_210               42   3e-05
osa-MIR164d_MI0001104_Oryza_sativa_miR164d_stem-loop_94                42   3e-05
vvi-MIR164c_MI0006505_Vitis_vinifera_miR164c_stem-loop_97              42   3e-05
csi-MIR164_MI0013295_Citrus_sinensis_miR164_stem-loop_278              42   3e-05
zma-MIR164d_MI0001470_Zea_mays_miR164d_stem-loop_216                   42   3e-05
bdi-MIR164a_MI0018118_Brachypodium_distachyon_miR164a_stem-loop_193    42   3e-05
ctr-MIR164_MI0013306_Citrus_trifoliata_miR164_stem-loop_297            42   3e-05
bdi-MIR164f_MI0018216_Brachypodium_distachyon_miR164f_stem-loop_161    42   3e-05
zma-MIR164c_MI0001472_Zea_mays_miR164c_stem-loop_270                   42   3e-05
sbi-MIR164_MI0001512_Sorghum_bicolor_miR164_stem-loop_126              42   3e-05
mdm-MIR164f_MI0023016_170                                              42   3e-05
vvi-MIR164d_MI0006506_Vitis_vinifera_miR164d_stem-loop_118             42   3e-05
mdm-MIR164e_MI0023015_164                                              42   3e-05
ath-MIR164b_MI0000198_Arabidopsis_thaliana_miR164b_stem-loop_153       42   3e-05
osa-MIR164b_MI0000669_Oryza_sativa_miR164b_stem-loop_109               42   3e-05
ssl-MIR164b_MI0019342_Salvia_sclarea_miR164b_stem-loop_94              42   3e-05
bdi-MIR164c_MI0018152_Brachypodium_distachyon_miR164c_stem-loop_138    40   1e-04
zma-MIR164f_MI0013194_Zea_mays_miR164f_stem-loop_108                   40   1e-04
cme-MIR164_MI0018163_Cucumis_melo_miR164_stem-loop_91                  40   1e-04
ath-MIR164c_MI0001087_Arabidopsis_thaliana_miR164c_stem-loop_102       40   1e-04
aly-MIR164c_MI0014529_Arabidopsis_lyrata_miR164c_stem-loop_115         40   1e-04
osa-MIR164e_MI0001105_Oryza_sativa_miR164e_stem-loop_132               38   5e-04
zma-MIR164h_MI0013196_Zea_mays_miR164h_stem-loop_219                   38   5e-04

>mdm-MIR164b_MI0023012_118
          Length = 118

 Score =  231 bits (116), Expect = 3e-62
 Identities = 118/118 (100%)
 Strand = Plus / Plus

                                                                       
Query: 5   gggtgagtagttcgtgttggagaagcagggcacgtgcaaattctagctcgagcaatcctt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gggtgagtagttcgtgttggagaagcagggcacgtgcaaattctagctcgagcaatcctt 60

                                                                     
Query: 65  catcaggagcttaaaaactttgcacttgctcrccttctccaacacaagcttctcacct 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  catcaggagcttaaaaactttgcacttgctcrccttctccaacacaagcttctcacct 118


>mdm-MIR164d_MI0023014_135
          Length = 135

 Score = 86.2 bits (43), Expect = 2e-18
 Identities = 52/55 (94%)
 Strand = Plus / Plus

                                                                 
Query: 4  tgggtgagtagttcgtgttggagaagcagggcacgtgcaaattctagctcgagca 58
          ||||||||||| || ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1  tgggtgagtagctcctgttggagaagcagggcacgtgcaaattctagctcaagca 55


>tcc-MIR164b_MI0017465_Theobroma_cacao_miR164b_stem-loop_130
          Length = 130

 Score = 64.3 bits (32), Expect = 8e-12
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                  
Query: 4  tgggtgagtagttcgtgttggagaagcagggcacgtgcaa 43
          ||||||||||| || |||||||||||||||||||||||||
Sbjct: 3  tgggtgagtagctcttgttggagaagcagggcacgtgcaa 42


>ghr-MIR164_MI0013538_Gossypium_hirsutum_miR164_stem-loop_101
          Length = 101

 Score = 54.3 bits (27), Expect = 8e-09
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                 
Query: 5  gggtgagtagttcgtgttggagaagcagggcacgtgcaa 43
          |||||||||  || |||||||||||||||||||||||||
Sbjct: 2  gggtgagtatctcttgttggagaagcagggcacgtgcaa 40


>mtr-MIR164a_MI0005573_Medicago_truncatula_miR164a_stem-loop_99
          Length = 99

 Score = 54.3 bits (27), Expect = 8e-09
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 19 tgttggagaagcagggcacgtgcaaat 45
          |||||||||||||||||||||||||||
Sbjct: 3  tgttggagaagcagggcacgtgcaaat 29


>bdi-MIR164e_MI0018215_Brachypodium_distachyon_miR164e_stem-
          loop_127
          Length = 127

 Score = 52.3 bits (26), Expect = 3e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 19 tgttggagaagcagggcacgtgcaaa 44
          ||||||||||||||||||||||||||
Sbjct: 16 tgttggagaagcagggcacgtgcaaa 41


>tcc-MIR164a_MI0017464_Theobroma_cacao_miR164a_stem-loop_128
          Length = 128

 Score = 52.3 bits (26), Expect = 3e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 19 tgttggagaagcagggcacgtgcaaa 44
          ||||||||||||||||||||||||||
Sbjct: 18 tgttggagaagcagggcacgtgcaaa 43


>mdm-MIR164c_MI0023013_117
          Length = 117

 Score = 52.3 bits (26), Expect = 3e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 19 tgttggagaagcagggcacgtgcaaa 44
          ||||||||||||||||||||||||||
Sbjct: 14 tgttggagaagcagggcacgtgcaaa 39


>ath-MIR164a_MI0000197_Arabidopsis_thaliana_miR164a_stem-loop_113
          Length = 113

 Score = 52.3 bits (26), Expect = 3e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 19 tgttggagaagcagggcacgtgcaaa 44
          ||||||||||||||||||||||||||
Sbjct: 16 tgttggagaagcagggcacgtgcaaa 41


>bna-MIR164_MI0006478_Brassica_napus_miR164_stem-loop_86
          Length = 86

 Score = 50.3 bits (25), Expect = 1e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 20 gttggagaagcagggcacgtgcaaa 44
          |||||||||||||||||||||||||
Sbjct: 5  gttggagaagcagggcacgtgcaaa 29


>gma-MIR164b_MI0017826_Glycine_max_miR164b_stem-loop_90
          Length = 90

 Score = 50.3 bits (25), Expect = 1e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 19 tgttggagaagcagggcacgtgcaa 43
          |||||||||||||||||||||||||
Sbjct: 7  tgttggagaagcagggcacgtgcaa 31



 Score = 40.3 bits (20), Expect = 1e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 82  ctttgcacttgctcrccttctccaacac 109
           |||||||| ||||| |||||||||||||
Sbjct: 63  ctttgcacgtgctccccttctccaacac 90


>mtr-MIR164c_MI0005616_Medicago_truncatula_miR164c_stem-loop_86
          Length = 86

 Score = 50.3 bits (25), Expect = 1e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 19 tgttggagaagcagggcacgtgcaa 43
          |||||||||||||||||||||||||
Sbjct: 3  tgttggagaagcagggcacgtgcaa 27


>gma-MIR164d_MI0017828_Glycine_max_miR164d_stem-loop_90
          Length = 90

 Score = 50.3 bits (25), Expect = 1e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 19 tgttggagaagcagggcacgtgcaa 43
          |||||||||||||||||||||||||
Sbjct: 10 tgttggagaagcagggcacgtgcaa 34



 Score = 38.4 bits (19), Expect = 5e-04
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 83  tttgcacttgctcrccttctccaacac 109
           ||||||| ||||| |||||||||||||
Sbjct: 56  tttgcacgtgctccccttctccaacac 82


>aly-MIR164a_MI0014527_Arabidopsis_lyrata_miR164a_stem-loop_79
          Length = 79

 Score = 50.3 bits (25), Expect = 1e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 20 gttggagaagcagggcacgtgcaaa 44
          |||||||||||||||||||||||||
Sbjct: 1  gttggagaagcagggcacgtgcaaa 25


>bra-MIR164a_MI0010651_Brassica_rapa_miR164a_stem-loop_92
          Length = 92

 Score = 50.3 bits (25), Expect = 1e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 20 gttggagaagcagggcacgtgcaaa 44
          |||||||||||||||||||||||||
Sbjct: 8  gttggagaagcagggcacgtgcaaa 32


>gma-MIR164_MI0007209_Glycine_max_miR164_stem-loop_95
          Length = 95

 Score = 50.3 bits (25), Expect = 1e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 19 tgttggagaagcagggcacgtgcaa 43
          |||||||||||||||||||||||||
Sbjct: 8  tgttggagaagcagggcacgtgcaa 32



 Score = 40.3 bits (20), Expect = 1e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 82  ctttgcacttgctcrccttctccaacac 109
           |||||||| ||||| |||||||||||||
Sbjct: 62  ctttgcacgtgctccccttctccaacac 89


>vvi-MIR164a_MI0006503_Vitis_vinifera_miR164a_stem-loop_121
          Length = 121

 Score = 48.3 bits (24), Expect = 5e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 19 tgttggagaagcagggcacgtgca 42
          ||||||||||||||||||||||||
Sbjct: 8  tgttggagaagcagggcacgtgca 31


>vun-MIR164_MI0019570_Vigna_unguiculata_miR164_stem-loop_72
          Length = 72

 Score = 48.3 bits (24), Expect = 5e-07
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 20 gttggagaagcagggcacgtgcaa 43
          ||||||||||||||||||||||||
Sbjct: 72 gttggagaagcagggcacgtgcaa 49


>sbi-MIR164e_MI0010866_Sorghum_bicolor_miR164e_stem-loop_205
          Length = 205

 Score = 46.3 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 20 gttggagaagcagggcacgtgca 42
          |||||||||||||||||||||||
Sbjct: 1  gttggagaagcagggcacgtgca 23


>bdi-MIR164b_MI0018094_Brachypodium_distachyon_miR164b_stem-
          loop_209
          Length = 209

 Score = 46.3 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 20 gttggagaagcagggcacgtgca 42
          |||||||||||||||||||||||
Sbjct: 31 gttggagaagcagggcacgtgca 53


>osa-MIR164c_MI0001103_Oryza_sativa_miR164c_stem-loop_119
          Length = 119

 Score = 46.3 bits (23), Expect = 2e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 14 gttcgtgttggagaagcagggcacgtgcaaa 44
          |||| |||||||||||||||| |||||||||
Sbjct: 3  gttcttgttggagaagcagggtacgtgcaaa 33


>rco-MIR164b_MI0013383_Ricinus_communis_miR164b_stem-loop_104
          Length = 104

 Score = 46.3 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 22 tggagaagcagggcacgtgcaaa 44
          |||||||||||||||||||||||
Sbjct: 6  tggagaagcagggcacgtgcaaa 28


>osa-MIR164a_MI0000668_Oryza_sativa_miR164a_stem-loop_156
          Length = 156

 Score = 46.3 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 20 gttggagaagcagggcacgtgca 42
          |||||||||||||||||||||||
Sbjct: 15 gttggagaagcagggcacgtgca 37


>ptc-MIR164a_MI0002212_Populus_trichocarpa_miR164a_stem-loop_85
          Length = 85

 Score = 46.3 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 22 tggagaagcagggcacgtgcaaa 44
          |||||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgcaaa 33


>bdi-MIR164d_MI0018214_Brachypodium_distachyon_miR164d_stem-
          loop_186
          Length = 186

 Score = 46.3 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 20 gttggagaagcagggcacgtgca 42
          |||||||||||||||||||||||
Sbjct: 16 gttggagaagcagggcacgtgca 38


>ptc-MIR164d_MI0002215_Populus_trichocarpa_miR164d_stem-loop_99
          Length = 99

 Score = 46.3 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 22 tggagaagcagggcacgtgcaaa 44
          |||||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgcaaa 33


>mtr-MIR164b_MI0005612_Medicago_truncatula_miR164b_stem-loop_144
          Length = 144

 Score = 44.3 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 22 tggagaagcagggcacgtgcaa 43
          ||||||||||||||||||||||
Sbjct: 6  tggagaagcagggcacgtgcaa 27


>ptc-MIR164c_MI0002214_Populus_trichocarpa_miR164c_stem-loop_82
          Length = 82

 Score = 44.3 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 22 tggagaagcagggcacgtgcaa 43
          ||||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgcaa 32


>zma-MIR164g_MI0013195_Zea_mays_miR164g_stem-loop_171
          Length = 171

 Score = 44.3 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 ttggagaagcagggcacgtgca 42
          ||||||||||||||||||||||
Sbjct: 1  ttggagaagcagggcacgtgca 22


>gma-MIR164c_MI0017827_Glycine_max_miR164c_stem-loop_90
          Length = 90

 Score = 44.3 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 22 tggagaagcagggcacgtgcaa 43
          ||||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgcaa 32


>rco-MIR164a_MI0013382_Ricinus_communis_miR164a_stem-loop_78
          Length = 78

 Score = 44.3 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 22 tggagaagcagggcacgtgcaa 43
          ||||||||||||||||||||||
Sbjct: 6  tggagaagcagggcacgtgcaa 27


>zma-MIR164b_MI0001471_Zea_mays_miR164b_stem-loop_128
          Length = 128

 Score = 44.3 bits (22), Expect = 8e-06
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 17 cgtgttggagaagcagggcacgtgca 42
          |||| |||||||||||||||||||||
Sbjct: 16 cgtggtggagaagcagggcacgtgca 41


>sbi-MIR164b_MI0001549_Sorghum_bicolor_miR164b_stem-loop_111
          Length = 111

 Score = 42.3 bits (21), Expect = 3e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 17 cgtgttggagaagcagggcacgtgc 41
          |||| ||||||||||||||||||||
Sbjct: 16 cgtgctggagaagcagggcacgtgc 40


>zma-MIR164a_MI0001469_Zea_mays_miR164a_stem-loop_152
          Length = 152

 Score = 42.3 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 tggagaagcagggcacgtgca 42
          |||||||||||||||||||||
Sbjct: 19 tggagaagcagggcacgtgca 39


>rco-MIR164c_MI0013384_Ricinus_communis_miR164c_stem-loop_116
          Length = 116

 Score = 42.3 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 tggagaagcagggcacgtgca 42
          |||||||||||||||||||||
Sbjct: 6  tggagaagcagggcacgtgca 26


>ptc-MIR164b_MI0002213_Populus_trichocarpa_miR164b_stem-loop_162
          Length = 162

 Score = 42.3 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 tggagaagcagggcacgtgca 42
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31


>aly-MIR164b_MI0014528_Arabidopsis_lyrata_miR164b_stem-loop_161
          Length = 161

 Score = 42.3 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 tggagaagcagggcacgtgca 42
          |||||||||||||||||||||
Sbjct: 3  tggagaagcagggcacgtgca 23


>ptc-MIR164e_MI0002216_Populus_trichocarpa_miR164e_stem-loop_155
          Length = 155

 Score = 42.3 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 tggagaagcagggcacgtgca 42
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31


>tae-MIR164_MI0006173_Triticum_aestivum_miR164_stem-loop_156
          Length = 156

 Score = 42.3 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 tggagaagcagggcacgtgca 42
          |||||||||||||||||||||
Sbjct: 3  tggagaagcagggcacgtgca 23


>sbi-MIR164d_MI0010865_Sorghum_bicolor_miR164d_stem-loop_160
          Length = 160

 Score = 42.3 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 tggagaagcagggcacgtgca 42
          |||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgca 21


>osa-MIR164f_MI0001159_Oryza_sativa_miR164f_stem-loop_210
          Length = 210

 Score = 42.3 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 tggagaagcagggcacgtgca 42
          |||||||||||||||||||||
Sbjct: 24 tggagaagcagggcacgtgca 44


>osa-MIR164d_MI0001104_Oryza_sativa_miR164d_stem-loop_94
          Length = 94

 Score = 42.3 bits (21), Expect = 3e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 17 cgtgttggagaagcagggcacgtgc 41
          |||| ||||||||||||||||||||
Sbjct: 6  cgtgctggagaagcagggcacgtgc 30


>vvi-MIR164c_MI0006505_Vitis_vinifera_miR164c_stem-loop_97
          Length = 97

 Score = 42.3 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 tggagaagcagggcacgtgca 42
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31


>csi-MIR164_MI0013295_Citrus_sinensis_miR164_stem-loop_278
          Length = 278

 Score = 42.3 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 tggagaagcagggcacgtgca 42
          |||||||||||||||||||||
Sbjct: 14 tggagaagcagggcacgtgca 34


>zma-MIR164d_MI0001470_Zea_mays_miR164d_stem-loop_216
          Length = 216

 Score = 42.3 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 tggagaagcagggcacgtgca 42
          |||||||||||||||||||||
Sbjct: 20 tggagaagcagggcacgtgca 40


>bdi-MIR164a_MI0018118_Brachypodium_distachyon_miR164a_stem-
          loop_193
          Length = 193

 Score = 42.3 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 tggagaagcagggcacgtgca 42
          |||||||||||||||||||||
Sbjct: 31 tggagaagcagggcacgtgca 51


>ctr-MIR164_MI0013306_Citrus_trifoliata_miR164_stem-loop_297
          Length = 297

 Score = 42.3 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 tggagaagcagggcacgtgca 42
          |||||||||||||||||||||
Sbjct: 22 tggagaagcagggcacgtgca 42


>bdi-MIR164f_MI0018216_Brachypodium_distachyon_miR164f_stem-loop_161
          Length = 161

 Score = 42.3 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 22  tggagaagcagggcacgtgca 42
           |||||||||||||||||||||
Sbjct: 144 tggagaagcagggcacgtgca 124


>zma-MIR164c_MI0001472_Zea_mays_miR164c_stem-loop_270
          Length = 270

 Score = 42.3 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 tggagaagcagggcacgtgca 42
          |||||||||||||||||||||
Sbjct: 18 tggagaagcagggcacgtgca 38


>sbi-MIR164_MI0001512_Sorghum_bicolor_miR164_stem-loop_126
          Length = 126

 Score = 42.3 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 tggagaagcagggcacgtgca 42
          |||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgca 21


>mdm-MIR164f_MI0023016_170
          Length = 170

 Score = 42.3 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 tggagaagcagggcacgtgca 42
          |||||||||||||||||||||
Sbjct: 3  tggagaagcagggcacgtgca 23


>vvi-MIR164d_MI0006506_Vitis_vinifera_miR164d_stem-loop_118
          Length = 118

 Score = 42.3 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 tggagaagcagggcacgtgca 42
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31


>mdm-MIR164e_MI0023015_164
          Length = 164

 Score = 42.3 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 tggagaagcagggcacgtgca 42
          |||||||||||||||||||||
Sbjct: 3  tggagaagcagggcacgtgca 23


>ath-MIR164b_MI0000198_Arabidopsis_thaliana_miR164b_stem-loop_153
          Length = 153

 Score = 42.3 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 tggagaagcagggcacgtgca 42
          |||||||||||||||||||||
Sbjct: 3  tggagaagcagggcacgtgca 23


>osa-MIR164b_MI0000669_Oryza_sativa_miR164b_stem-loop_109
          Length = 109

 Score = 42.3 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 tggagaagcagggcacgtgca 42
          |||||||||||||||||||||
Sbjct: 9  tggagaagcagggcacgtgca 29


>ssl-MIR164b_MI0019342_Salvia_sclarea_miR164b_stem-loop_94
          Length = 94

 Score = 42.3 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 tggagaagcagggcacgtgca 42
          |||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgca 21


>bdi-MIR164c_MI0018152_Brachypodium_distachyon_miR164c_stem-
          loop_138
          Length = 138

 Score = 40.3 bits (20), Expect = 1e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 22 tggagaagcagggcacgtgc 41
          ||||||||||||||||||||
Sbjct: 34 tggagaagcagggcacgtgc 53


>zma-MIR164f_MI0013194_Zea_mays_miR164f_stem-loop_108
          Length = 108

 Score = 40.3 bits (20), Expect = 1e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 22 tggagaagcagggcacgtgc 41
          ||||||||||||||||||||
Sbjct: 2  tggagaagcagggcacgtgc 21


>cme-MIR164_MI0018163_Cucumis_melo_miR164_stem-loop_91
          Length = 91

 Score = 40.3 bits (20), Expect = 1e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 22 tggagaagcagggcacgtgc 41
          ||||||||||||||||||||
Sbjct: 14 tggagaagcagggcacgtgc 33


>ath-MIR164c_MI0001087_Arabidopsis_thaliana_miR164c_stem-loop_102
          Length = 102

 Score = 40.3 bits (20), Expect = 1e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 22 tggagaagcagggcacgtgc 41
          ||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30


>aly-MIR164c_MI0014529_Arabidopsis_lyrata_miR164c_stem-loop_115
          Length = 115

 Score = 40.3 bits (20), Expect = 1e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 22 tggagaagcagggcacgtgc 41
          ||||||||||||||||||||
Sbjct: 18 tggagaagcagggcacgtgc 37


>osa-MIR164e_MI0001105_Oryza_sativa_miR164e_stem-loop_132
          Length = 132

 Score = 38.4 bits (19), Expect = 5e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 22 tggagaagcagggcacgtg 40
          |||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtg 29


>zma-MIR164h_MI0013196_Zea_mays_miR164h_stem-loop_219
          Length = 219

 Score = 38.4 bits (19), Expect = 5e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 22 tggagaagcagggcacgtg 40
          |||||||||||||||||||
Sbjct: 2  tggagaagcagggcacgtg 20


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.