(187 letters)

Database: hairpin_length.fa 
           18,432 sequences; 1,887,117 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mdm-MIR164f_MI0023016_170                                             337   7e-94
mdm-MIR164e_MI0023015_164                                              98   1e-21
ptc-MIR164e_MI0002216_Populus_trichocarpa_miR164e_stem-loop_155        76   4e-15
gma-MIR164c_MI0017827_Glycine_max_miR164c_stem-loop_90                 76   4e-15
csi-MIR164_MI0013295_Citrus_sinensis_miR164_stem-loop_278              72   7e-14
ctr-MIR164_MI0013306_Citrus_trifoliata_miR164_stem-loop_297            72   7e-14
vvi-MIR164c_MI0006505_Vitis_vinifera_miR164c_stem-loop_97              70   3e-13
mtr-MIR164b_MI0005612_Medicago_truncatula_miR164b_stem-loop_144        68   1e-12
rco-MIR164c_MI0013384_Ricinus_communis_miR164c_stem-loop_116           68   1e-12
ptc-MIR164b_MI0002213_Populus_trichocarpa_miR164b_stem-loop_162        68   1e-12
cme-MIR164_MI0018163_Cucumis_melo_miR164_stem-loop_91                  64   2e-11
ssl-MIR164b_MI0019342_Salvia_sclarea_miR164b_stem-loop_94              58   1e-09
aly-MIR164b_MI0014528_Arabidopsis_lyrata_miR164b_stem-loop_161         54   2e-08
ath-MIR164b_MI0000198_Arabidopsis_thaliana_miR164b_stem-loop_153       54   2e-08
osa-MIR164f_MI0001159_Oryza_sativa_miR164f_stem-loop_210               46   4e-06
bdi-MIR164a_MI0018118_Brachypodium_distachyon_miR164a_stem-loop_193    46   4e-06
bdi-MIR164f_MI0018216_Brachypodium_distachyon_miR164f_stem-loop_161    46   4e-06
zma-MIR164c_MI0001472_Zea_mays_miR164c_stem-loop_270                   46   4e-06
sbi-MIR164_MI0001512_Sorghum_bicolor_miR164_stem-loop_126              46   4e-06
vvi-MIR164d_MI0006506_Vitis_vinifera_miR164d_stem-loop_118             46   4e-06
zma-MIR164b_MI0001471_Zea_mays_miR164b_stem-loop_128                   46   4e-06
osa-MIR164b_MI0000669_Oryza_sativa_miR164b_stem-loop_109               46   4e-06
zma-MIR164a_MI0001469_Zea_mays_miR164a_stem-loop_152                   44   1e-05
tae-MIR164_MI0006173_Triticum_aestivum_miR164_stem-loop_156            44   1e-05
sbi-MIR164d_MI0010865_Sorghum_bicolor_miR164d_stem-loop_160            44   1e-05
bdi-MIR164b_MI0018094_Brachypodium_distachyon_miR164b_stem-loop_209    44   1e-05
zma-MIR164d_MI0001470_Zea_mays_miR164d_stem-loop_216                   44   1e-05
osa-MIR164a_MI0000668_Oryza_sativa_miR164a_stem-loop_156               44   1e-05
ath-MIR164c_MI0001087_Arabidopsis_thaliana_miR164c_stem-loop_102       44   1e-05
bdi-MIR164d_MI0018214_Brachypodium_distachyon_miR164d_stem-loop_186    44   1e-05
aly-MIR164c_MI0014529_Arabidopsis_lyrata_miR164c_stem-loop_115         44   1e-05
ssl-MIR164a_MI0019341_Salvia_sclarea_miR164a_stem-loop_105             44   1e-05
bna-MIR164_MI0006478_Brassica_napus_miR164_stem-loop_86                42   6e-05
sbi-MIR164e_MI0010866_Sorghum_bicolor_miR164e_stem-loop_205            42   6e-05
tcc-MIR164b_MI0017465_Theobroma_cacao_miR164b_stem-loop_130            42   6e-05
vvi-MIR164a_MI0006503_Vitis_vinifera_miR164a_stem-loop_121             42   6e-05
gma-MIR164b_MI0017826_Glycine_max_miR164b_stem-loop_90                 42   6e-05
ptc-MIR164c_MI0002214_Populus_trichocarpa_miR164c_stem-loop_82         42   6e-05
mdm-MIR164d_MI0023014_135                                              42   6e-05
zma-MIR164g_MI0013195_Zea_mays_miR164g_stem-loop_171                   42   6e-05
bdi-MIR164e_MI0018215_Brachypodium_distachyon_miR164e_stem-loop_127    42   6e-05
rco-MIR164b_MI0013383_Ricinus_communis_miR164b_stem-loop_104           42   6e-05
mtr-MIR164c_MI0005616_Medicago_truncatula_miR164c_stem-loop_86         42   6e-05
vun-MIR164_MI0019570_Vigna_unguiculata_miR164_stem-loop_72             42   6e-05
ghr-MIR164_MI0013538_Gossypium_hirsutum_miR164_stem-loop_101           42   6e-05
mtr-MIR164a_MI0005573_Medicago_truncatula_miR164a_stem-loop_99         42   6e-05
mdm-MIR164b_MI0023012_118                                              42   6e-05
gma-MIR164d_MI0017828_Glycine_max_miR164d_stem-loop_90                 42   6e-05
aly-MIR164a_MI0014527_Arabidopsis_lyrata_miR164a_stem-loop_79          42   6e-05
rco-MIR164a_MI0013382_Ricinus_communis_miR164a_stem-loop_78            42   6e-05
bra-MIR164a_MI0010651_Brassica_rapa_miR164a_stem-loop_92               42   6e-05
gma-MIR164_MI0007209_Glycine_max_miR164_stem-loop_95                   42   6e-05
ptc-MIR164a_MI0002212_Populus_trichocarpa_miR164a_stem-loop_85         42   6e-05
tcc-MIR164a_MI0017464_Theobroma_cacao_miR164a_stem-loop_128            42   6e-05
mdm-MIR164c_MI0023013_117                                              42   6e-05
ath-MIR164a_MI0000197_Arabidopsis_thaliana_miR164a_stem-loop_113       42   6e-05
ptc-MIR164d_MI0002215_Populus_trichocarpa_miR164d_stem-loop_99         42   6e-05
sbi-MIR164b_MI0001549_Sorghum_bicolor_miR164b_stem-loop_111            40   2e-04
bdi-MIR164c_MI0018152_Brachypodium_distachyon_miR164c_stem-loop_138    40   2e-04
osa-MIR164d_MI0001104_Oryza_sativa_miR164d_stem-loop_94                40   2e-04
zma-MIR164f_MI0013194_Zea_mays_miR164f_stem-loop_108                   40   2e-04
osa-MIR164e_MI0001105_Oryza_sativa_miR164e_stem-loop_132               38   0.001
zma-MIR164h_MI0013196_Zea_mays_miR164h_stem-loop_219                   38   0.001

>mdm-MIR164f_MI0023016_170
          Length = 170

 Score =  337 bits (170), Expect = 7e-94
 Identities = 170/170 (100%)
 Strand = Plus / Plus

                                                                       
Query: 10  gatggagaagcagggcacgtgcatttctaactcattcgatcgcgtatactgagatatata 69
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gatggagaagcagggcacgtgcatttctaactcattcgatcgcgtatactgagatatata 60

                                                                       
Query: 70  tgtatatgtatgtatgctttttatttagcagctgggaatttattacaagtttatatgtgt 129
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tgtatatgtatgtatgctttttatttagcagctgggaatttattacaagtttatatgtgt 120

                                                             
Query: 130 gtctcatatccagtgatgagttagttgttcatgtgcccctcttccccatc 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtctcatatccagtgatgagttagttgttcatgtgcccctcttccccatc 170


>mdm-MIR164e_MI0023015_164
          Length = 164

 Score = 97.6 bits (49), Expect = 1e-21
 Identities = 49/49 (100%)
 Strand = Plus / Plus

                                                            
Query: 131 tctcatatccagtgatgagttagttgttcatgtgcccctcttccccatc 179
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 tctcatatccagtgatgagttagttgttcatgtgcccctcttccccatc 164



 Score = 75.8 bits (38), Expect = 4e-15
 Identities = 38/38 (100%)
 Strand = Plus / Plus

                                                
Query: 10 gatggagaagcagggcacgtgcatttctaactcattcg 47
          ||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gatggagaagcagggcacgtgcatttctaactcattcg 38


>ptc-MIR164e_MI0002216_Populus_trichocarpa_miR164e_stem-loop_155
          Length = 155

 Score = 75.8 bits (38), Expect = 4e-15
 Identities = 41/42 (97%)
 Strand = Plus / Plus

                                                    
Query: 3  tgagcaagatggagaagcagggcacgtgcatttctaactcat 44
          |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2  tgagcaagatggagaagcagggcacgtgcattactaactcat 43



 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 147 gagttagttgttcatgtgcccctcttccccatcatga 183
           ||||||||| ||||||||||  |||||||||||||||
Sbjct: 117 gagttagttcttcatgtgcctgtcttccccatcatga 153


>gma-MIR164c_MI0017827_Glycine_max_miR164c_stem-loop_90
          Length = 90

 Score = 75.8 bits (38), Expect = 4e-15
 Identities = 41/42 (97%)
 Strand = Plus / Plus

                                                    
Query: 3  tgagcaagatggagaagcagggcacgtgcatttctaactcat 44
          |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2  tgagcaagatggagaagcagggcacgtgcaattctaactcat 43


>csi-MIR164_MI0013295_Citrus_sinensis_miR164_stem-loop_278
          Length = 278

 Score = 71.9 bits (36), Expect = 7e-14
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                  
Query: 4  gagcaagatggagaagcagggcacgtgcatttctaactca 43
          ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 6  gagcaagatggagaagcagggcacgtgcattactaactca 45



 Score = 56.0 bits (28), Expect = 4e-09
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 146 tgagttagttgttcatgtgcccctcttccccatcatgacc 185
           ||||||| || ||||||||||| |||||||||||||||||
Sbjct: 150 tgagttatttcttcatgtgcccttcttccccatcatgacc 189


>ctr-MIR164_MI0013306_Citrus_trifoliata_miR164_stem-loop_297
          Length = 297

 Score = 71.9 bits (36), Expect = 7e-14
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                  
Query: 4  gagcaagatggagaagcagggcacgtgcatttctaactca 43
          ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 14 gagcaagatggagaagcagggcacgtgcattactaactca 53



 Score = 56.0 bits (28), Expect = 4e-09
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 146 tgagttagttgttcatgtgcccctcttccccatcatgacc 185
           ||||||| || ||||||||||| |||||||||||||||||
Sbjct: 158 tgagttatttcttcatgtgcccttcttccccatcatgacc 197


>vvi-MIR164c_MI0006505_Vitis_vinifera_miR164c_stem-loop_97
          Length = 97

 Score = 69.9 bits (35), Expect = 3e-13
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                     
Query: 2  ttgagcaagatggagaagcagggcacgtgcatttctaactcat 44
          ||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 1  ttgagcaagatggagaagcagggcacgtgcattactagctcat 43


>mtr-MIR164b_MI0005612_Medicago_truncatula_miR164b_stem-loop_144
          Length = 144

 Score = 67.9 bits (34), Expect = 1e-12
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                 
Query: 146 tgagttagttgttcatgtgcccctcttccccatcatga 183
           |||||||||| |||||||||||||||||||||||||||
Sbjct: 107 tgagttagttcttcatgtgcccctcttccccatcatga 144



 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                
Query: 7  caagatggagaagcagggcacgtgcatttctaactcat 44
          |||||||||||||||||||||||||| | |||||||||
Sbjct: 1  caagatggagaagcagggcacgtgcaatactaactcat 38


>rco-MIR164c_MI0013384_Ricinus_communis_miR164c_stem-loop_116
          Length = 116

 Score = 67.9 bits (34), Expect = 1e-12
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                
Query: 7  caagatggagaagcagggcacgtgcatttctaactcat 44
          |||||||||||||||||||||||||||| |||||||||
Sbjct: 1  caagatggagaagcagggcacgtgcattactaactcat 38



 Score = 56.0 bits (28), Expect = 4e-09
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                               
Query: 149 gttagttgttcatgtgcccctcttccccatcatgac 184
           ||||||| ||||||||||| ||||||||||||||||
Sbjct: 81  gttagttcttcatgtgcccgtcttccccatcatgac 116


>ptc-MIR164b_MI0002213_Populus_trichocarpa_miR164b_stem-loop_162
          Length = 162

 Score = 67.9 bits (34), Expect = 1e-12
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                    
Query: 3  tgagcaagatggagaagcagggcacgtgcatttctaactcat 44
          |||||||||||||||||||||||||||||| | |||||||||
Sbjct: 2  tgagcaagatggagaagcagggcacgtgcactactaactcat 43


>cme-MIR164_MI0018163_Cucumis_melo_miR164_stem-loop_91
          Length = 91

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                  
Query: 4  gagcaagatggagaagcagggcacgtgcatttctaactca 43
          |||||||||||||||||||||||||||| || ||||||||
Sbjct: 6  gagcaagatggagaagcagggcacgtgctttactaactca 45


>ssl-MIR164b_MI0019342_Salvia_sclarea_miR164b_stem-loop_94
          Length = 94

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                           
Query: 12 tggagaagcagggcacgtgcatttctaactcat 44
          ||||||||||||||||||||||| |||||||||
Sbjct: 1  tggagaagcagggcacgtgcattactaactcat 33


>aly-MIR164b_MI0014528_Arabidopsis_lyrata_miR164b_stem-loop_161
          Length = 161

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                             
Query: 10 gatggagaagcagggcacgtgcatttctaactcat 44
          ||||||||||||||||||||||||| ||| |||||
Sbjct: 1  gatggagaagcagggcacgtgcattactagctcat 35



 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 145 atgagttagttgttcatgtgcccctcttccccatc 179
           ||||||||||| ||||||||||| ||||| |||||
Sbjct: 127 atgagttagttcttcatgtgcccatcttcaccatc 161


>ath-MIR164b_MI0000198_Arabidopsis_thaliana_miR164b_stem-loop_153
          Length = 153

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                             
Query: 10 gatggagaagcagggcacgtgcatttctaactcat 44
          ||||||||||||||||||||||||| ||| |||||
Sbjct: 1  gatggagaagcagggcacgtgcattactagctcat 35



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 144 gatgagttagttgttcatgtgcccctcttccccatc 179
           |||||||||||| ||||||||||| ||||| |||||
Sbjct: 118 gatgagttagttcttcatgtgcccatcttcaccatc 153


>osa-MIR164f_MI0001159_Oryza_sativa_miR164f_stem-loop_210
          Length = 210

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tggagaagcagggcacgtgcatt 34
          |||||||||||||||||||||||
Sbjct: 24 tggagaagcagggcacgtgcatt 46


>bdi-MIR164a_MI0018118_Brachypodium_distachyon_miR164a_stem-
          loop_193
          Length = 193

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tggagaagcagggcacgtgcatt 34
          |||||||||||||||||||||||
Sbjct: 31 tggagaagcagggcacgtgcatt 53


>bdi-MIR164f_MI0018216_Brachypodium_distachyon_miR164f_stem-loop_161
          Length = 161

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 12  tggagaagcagggcacgtgcatt 34
           |||||||||||||||||||||||
Sbjct: 144 tggagaagcagggcacgtgcatt 122


>zma-MIR164c_MI0001472_Zea_mays_miR164c_stem-loop_270
          Length = 270

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tggagaagcagggcacgtgcatt 34
          |||||||||||||||||||||||
Sbjct: 18 tggagaagcagggcacgtgcatt 40


>sbi-MIR164_MI0001512_Sorghum_bicolor_miR164_stem-loop_126
          Length = 126

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tggagaagcagggcacgtgcatt 34
          |||||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgcatt 23


>vvi-MIR164d_MI0006506_Vitis_vinifera_miR164d_stem-loop_118
          Length = 118

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 10 gatggagaagcagggcacgtgca 32
          |||||||||||||||||||||||
Sbjct: 9  gatggagaagcagggcacgtgca 31


>zma-MIR164b_MI0001471_Zea_mays_miR164b_stem-loop_128
          Length = 128

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tggagaagcagggcacgtgcatt 34
          |||||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgcatt 43


>osa-MIR164b_MI0000669_Oryza_sativa_miR164b_stem-loop_109
          Length = 109

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tggagaagcagggcacgtgcatt 34
          |||||||||||||||||||||||
Sbjct: 9  tggagaagcagggcacgtgcatt 31


>zma-MIR164a_MI0001469_Zea_mays_miR164a_stem-loop_152
          Length = 152

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tggagaagcagggcacgtgcat 33
          ||||||||||||||||||||||
Sbjct: 19 tggagaagcagggcacgtgcat 40


>tae-MIR164_MI0006173_Triticum_aestivum_miR164_stem-loop_156
          Length = 156

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tggagaagcagggcacgtgcat 33
          ||||||||||||||||||||||
Sbjct: 3  tggagaagcagggcacgtgcat 24


>sbi-MIR164d_MI0010865_Sorghum_bicolor_miR164d_stem-loop_160
          Length = 160

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tggagaagcagggcacgtgcat 33
          ||||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgcat 22


>bdi-MIR164b_MI0018094_Brachypodium_distachyon_miR164b_stem-
          loop_209
          Length = 209

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tggagaagcagggcacgtgcat 33
          ||||||||||||||||||||||
Sbjct: 33 tggagaagcagggcacgtgcat 54


>zma-MIR164d_MI0001470_Zea_mays_miR164d_stem-loop_216
          Length = 216

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tggagaagcagggcacgtgcat 33
          ||||||||||||||||||||||
Sbjct: 20 tggagaagcagggcacgtgcat 41


>osa-MIR164a_MI0000668_Oryza_sativa_miR164a_stem-loop_156
          Length = 156

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tggagaagcagggcacgtgcat 33
          ||||||||||||||||||||||
Sbjct: 17 tggagaagcagggcacgtgcat 38


>ath-MIR164c_MI0001087_Arabidopsis_thaliana_miR164c_stem-loop_102
          Length = 102

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 10 gatggagaagcagggcacgtgc 31
          ||||||||||||||||||||||
Sbjct: 9  gatggagaagcagggcacgtgc 30


>bdi-MIR164d_MI0018214_Brachypodium_distachyon_miR164d_stem-
          loop_186
          Length = 186

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tggagaagcagggcacgtgcat 33
          ||||||||||||||||||||||
Sbjct: 18 tggagaagcagggcacgtgcat 39


>aly-MIR164c_MI0014529_Arabidopsis_lyrata_miR164c_stem-loop_115
          Length = 115

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 10 gatggagaagcagggcacgtgc 31
          ||||||||||||||||||||||
Sbjct: 16 gatggagaagcagggcacgtgc 37


>ssl-MIR164a_MI0019341_Salvia_sclarea_miR164a_stem-loop_105
          Length = 105

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                          
Query: 12 tggagaagcagggcacgtgcatttctaactca 43
          |||||||| |||||||||||| | ||||||||
Sbjct: 1  tggagaagyagggcacgtgcaatactaactca 32



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 147 gagttagttgttcatgtgcccctcttc 173
           ||||||||| ||||||||||| |||||
Sbjct: 75  gagttagttcttcatgtgcccatcttc 101


>bna-MIR164_MI0006478_Brassica_napus_miR164_stem-loop_86
          Length = 86

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 7  tggagaagcagggcacgtgca 27


>sbi-MIR164e_MI0010866_Sorghum_bicolor_miR164e_stem-loop_205
          Length = 205

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 3  tggagaagcagggcacgtgca 23


>tcc-MIR164b_MI0017465_Theobroma_cacao_miR164b_stem-loop_130
          Length = 130

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgca 41


>vvi-MIR164a_MI0006503_Vitis_vinifera_miR164a_stem-loop_121
          Length = 121

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31


>gma-MIR164b_MI0017826_Glycine_max_miR164b_stem-loop_90
          Length = 90

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 10 tggagaagcagggcacgtgca 30


>ptc-MIR164c_MI0002214_Populus_trichocarpa_miR164c_stem-loop_82
          Length = 82

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31


>mdm-MIR164d_MI0023014_135
          Length = 135

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 19 tggagaagcagggcacgtgca 39


>zma-MIR164g_MI0013195_Zea_mays_miR164g_stem-loop_171
          Length = 171

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 2  tggagaagcagggcacgtgca 22


>bdi-MIR164e_MI0018215_Brachypodium_distachyon_miR164e_stem-
          loop_127
          Length = 127

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 19 tggagaagcagggcacgtgca 39


>rco-MIR164b_MI0013383_Ricinus_communis_miR164b_stem-loop_104
          Length = 104

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 6  tggagaagcagggcacgtgca 26


>mtr-MIR164c_MI0005616_Medicago_truncatula_miR164c_stem-loop_86
          Length = 86

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 6  tggagaagcagggcacgtgca 26


>vun-MIR164_MI0019570_Vigna_unguiculata_miR164_stem-loop_72
          Length = 72

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 70 tggagaagcagggcacgtgca 50


>ghr-MIR164_MI0013538_Gossypium_hirsutum_miR164_stem-loop_101
          Length = 101

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 19 tggagaagcagggcacgtgca 39


>mtr-MIR164a_MI0005573_Medicago_truncatula_miR164a_stem-loop_99
          Length = 99

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 6  tggagaagcagggcacgtgca 26


>mdm-MIR164b_MI0023012_118
          Length = 118

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 18 tggagaagcagggcacgtgca 38


>gma-MIR164d_MI0017828_Glycine_max_miR164d_stem-loop_90
          Length = 90

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 13 tggagaagcagggcacgtgca 33


>aly-MIR164a_MI0014527_Arabidopsis_lyrata_miR164a_stem-loop_79
          Length = 79

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 3  tggagaagcagggcacgtgca 23


>rco-MIR164a_MI0013382_Ricinus_communis_miR164a_stem-loop_78
          Length = 78

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 6  tggagaagcagggcacgtgca 26


>bra-MIR164a_MI0010651_Brassica_rapa_miR164a_stem-loop_92
          Length = 92

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 10 tggagaagcagggcacgtgca 30


>gma-MIR164_MI0007209_Glycine_max_miR164_stem-loop_95
          Length = 95

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31


>ptc-MIR164a_MI0002212_Populus_trichocarpa_miR164a_stem-loop_85
          Length = 85

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31


>tcc-MIR164a_MI0017464_Theobroma_cacao_miR164a_stem-loop_128
          Length = 128

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgca 41


>mdm-MIR164c_MI0023013_117
          Length = 117

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 17 tggagaagcagggcacgtgca 37


>ath-MIR164a_MI0000197_Arabidopsis_thaliana_miR164a_stem-loop_113
          Length = 113

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 19 tggagaagcagggcacgtgca 39


>ptc-MIR164d_MI0002215_Populus_trichocarpa_miR164d_stem-loop_99
          Length = 99

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31


>sbi-MIR164b_MI0001549_Sorghum_bicolor_miR164b_stem-loop_111
          Length = 111

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 12 tggagaagcagggcacgtgc 31
          ||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgc 40


>bdi-MIR164c_MI0018152_Brachypodium_distachyon_miR164c_stem-
          loop_138
          Length = 138

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 12 tggagaagcagggcacgtgc 31
          ||||||||||||||||||||
Sbjct: 34 tggagaagcagggcacgtgc 53


>osa-MIR164d_MI0001104_Oryza_sativa_miR164d_stem-loop_94
          Length = 94

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 12 tggagaagcagggcacgtgc 31
          ||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30


>zma-MIR164f_MI0013194_Zea_mays_miR164f_stem-loop_108
          Length = 108

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 12 tggagaagcagggcacgtgc 31
          ||||||||||||||||||||
Sbjct: 2  tggagaagcagggcacgtgc 21


>osa-MIR164e_MI0001105_Oryza_sativa_miR164e_stem-loop_132
          Length = 132

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 12 tggagaagcagggcacgtg 30
          |||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtg 29


>zma-MIR164h_MI0013196_Zea_mays_miR164h_stem-loop_219
          Length = 219

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 12 tggagaagcagggcacgtg 30
          |||||||||||||||||||
Sbjct: 2  tggagaagcagggcacgtg 20


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.