(102 letters)

Database: hairpin_length.fa 
           18,432 sequences; 1,887,117 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mdm-MIR160a_MI0023004_83                                              165   3e-42
mdm-MIR160b_MI0023005_89                                              101   4e-23
mdm-MIR160d_MI0023007_89                                              101   4e-23
ptc-MIR160a_MI0002201_Populus_trichocarpa_miR160a_stem-loop_102        68   5e-13
rco-MIR160b_MI0013380_Ricinus_communis_miR160b_stem-loop_96            66   2e-12
ptc-MIR160d_MI0002204_Populus_trichocarpa_miR160d_stem-loop_103        60   1e-10
ath-MIR160c_MI0000192_Arabidopsis_thaliana_miR160c_stem-loop_89        52   3e-08
aly-MIR160c_MI0014523_Arabidopsis_lyrata_miR160c_stem-loop_119         52   3e-08
vvi-MIR160c_MI0006498_Vitis_vinifera_miR160c_stem-loop_106             52   3e-08
tae-MIR160_MI0006172_Triticum_aestivum_miR160_stem-loop_148            50   1e-07
bdi-MIR160a_MI0018086_Brachypodium_distachyon_miR160a_stem-loop_175    50   1e-07
aly-MIR160b_MI0014522_Arabidopsis_lyrata_miR160b_stem-loop_125         50   1e-07
ath-MIR160b_MI0000191_Arabidopsis_thaliana_miR160b_stem-loop_89        50   1e-07
osa-MIR160d_MI0000666_Oryza_sativa_miR160d_stem-loop_142               48   5e-07
zma-MIR160e_MI0001479_Zea_mays_miR160e_stem-loop_94                    48   5e-07
far-MIR160_MI0016604_Festuca_arundinacea_miR160_stem-loop_148          48   5e-07
bdi-MIR160b_MI0018093_Brachypodium_distachyon_miR160b_stem-loop_146    48   5e-07
osa-MIR160b_MI0000664_Oryza_sativa_miR160b_stem-loop_139               48   5e-07
bdi-MIR160c_MI0018100_Brachypodium_distachyon_miR160c_stem-loop_148    48   5e-07
zma-MIR160d_MI0001467_Zea_mays_miR160d_stem-loop_142                   48   5e-07
zma-MIR160b_MI0001468_Zea_mays_miR160b_stem-loop_121                   48   5e-07
zma-MIR160g_MI0013192_Zea_mays_miR160g_stem-loop_86                    48   5e-07
tcc-MIR160b_MI0017461_Theobroma_cacao_miR160b_stem-loop_120            46   2e-06
bra-MIR160a_MI0010650_Brassica_rapa_miR160a_stem-loop_127              46   2e-06
vvi-MIR160e_MI0006501_Vitis_vinifera_miR160e_stem-loop_102             46   2e-06
sly-MIR160a_MI0008357_Solanum_lycopersicum_miR160a_stem-loop_129       46   2e-06
aly-MIR160a_MI0014521_Arabidopsis_lyrata_miR160a_stem-loop_158         46   2e-06
pab-MIR160a_MI0016116_Picea_abies_miR160a_stem-loop_106                46   2e-06
zma-MIR160a_MI0001465_Zea_mays_miR160a_stem-loop_104                   46   2e-06
ath-MIR160a_MI0000190_Arabidopsis_thaliana_miR160a_stem-loop_85        46   2e-06
sbi-MIR160b_MI0001510_Sorghum_bicolor_miR160b_stem-loop_82             46   2e-06
osa-MIR160a_MI0000663_Oryza_sativa_miR160a_stem-loop_88                46   2e-06
sbi-MIR160a_MI0001508_Sorghum_bicolor_miR160a_stem-loop_84             46   2e-06
ppt-MIR160a_MI0005655_Physcomitrella_patens_miR160a_stem-loop_99       44   8e-06
zma-MIR160f_MI0001848_Zea_mays_miR160f_stem-loop_116                   44   8e-06
vvi-MIR160d_MI0006499_Vitis_vinifera_miR160d_stem-loop_102             44   8e-06
zma-MIR160c_MI0001466_Zea_mays_miR160c_stem-loop_100                   44   8e-06
sbi-MIR160c_MI0001509_Sorghum_bicolor_miR160c_stem-loop_83             44   8e-06
smo-MIR160b_MI0006052_Selaginella_moellendorffii_miR160b_stem-lo...    44   8e-06
sbi-MIR160e_MI0001511_Sorghum_bicolor_miR160e_stem-loop_95             44   8e-06
sbi-MIR160d_MI0001507_Sorghum_bicolor_miR160d_stem-loop_100            44   8e-06
bdi-MIR160d_MI0018106_Brachypodium_distachyon_miR160d_stem-loop_150    44   8e-06
osa-MIR160e_MI0001100_Oryza_sativa_miR160e_stem-loop_114               44   8e-06
ttu-MIR160_MI0016454_Triticum_turgidum_miR160_stem-loop_100            44   8e-06
osa-MIR160c_MI0000665_Oryza_sativa_miR160c_stem-loop_99                44   8e-06
ppt-MIR160f_MI0005902_Physcomitrella_patens_miR160f_stem-loop_138      44   8e-06
ppt-MIR160e_MI0005901_Physcomitrella_patens_miR160e_stem-loop_138      44   8e-06
ppt-MIR160i_MI0005905_Physcomitrella_patens_miR160i_stem-loop_139      42   3e-05
vun-MIR160_MI0019568_Vigna_unguiculata_miR160_stem-loop_117            42   3e-05
aau-MIR160_MI0018979_Acacia_auriculiformis_miR160_stem-loop_88         42   3e-05
mtr-MIR160e_MI0005629_Medicago_truncatula_miR160e_stem-loop_91         42   3e-05
gma-MIR160b_MI0017821_Glycine_max_miR160b_stem-loop_90                 42   3e-05
gma-MIR160c_MI0017822_Glycine_max_miR160c_stem-loop_91                 42   3e-05
ptc-MIR160b_MI0002202_Populus_trichocarpa_miR160b_stem-loop_98         42   3e-05
gma-MIR160e_MI0017824_Glycine_max_miR160e_stem-loop_90                 42   3e-05
rco-MIR160a_MI0013379_Ricinus_communis_miR160a_stem-loop_92            42   3e-05
smo-MIR160a_MI0006051_Selaginella_moellendorffii_miR160a_stem-lo...    42   3e-05
mtr-MIR160b_MI0005574_Medicago_truncatula_miR160b_stem-loop_91         42   3e-05
mtr-MIR160d_MI0005615_Medicago_truncatula_miR160d_stem-loop_91         42   3e-05
mdm-MIR160c_MI0023006_88                                               42   3e-05
aqc-MIR160b_MI0012072_Aquilegia_caerulea_miR160b_stem-loop_82          42   3e-05
mdm-MIR160e_MI0023008_88                                               42   3e-05
gma-MIR160d_MI0017823_Glycine_max_miR160d_stem-loop_91                 42   3e-05
gma-MIR160_MI0001774_Glycine_max_miR160_stem-loop_119                  42   3e-05
ptc-MIR160c_MI0002203_Populus_trichocarpa_miR160c_stem-loop_98         42   3e-05
mtr-MIR160_MI0001739_Medicago_truncatula_miR160_stem-loop_119          42   3e-05
csi-MIR160_MI0013294_Citrus_sinensis_miR160_stem-loop_143              42   3e-05
pab-MIR160b_MI0016117_Picea_abies_miR160b_stem-loop_116                42   3e-05
ppt-MIR160b_MI0005656_Physcomitrella_patens_miR160b_stem-loop_103      40   1e-04

>mdm-MIR160a_MI0023004_83
          Length = 83

 Score =  165 bits (83), Expect = 3e-42
 Identities = 83/83 (100%)
 Strand = Plus / Plus

                                                                      
Query: 11 tatgcctggctccctgtatgccacaagcagaagttcaatttcttgattggctattgtggg 70
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tatgcctggctccctgtatgccacaagcagaagttcaatttcttgattggctattgtggg 60

                                 
Query: 71 tggcgtacaaggagccaagcata 93
          |||||||||||||||||||||||
Sbjct: 61 tggcgtacaaggagccaagcata 83


>mdm-MIR160b_MI0023005_89
          Length = 89

 Score =  101 bits (51), Expect = 4e-23
 Identities = 79/88 (89%), Gaps = 4/88 (4%)
 Strand = Plus / Plus

                                                                      
Query: 10 ttatgcctggctccctgtatgccacaagcagaagttcaa----tttcttgattggctatt 65
          |||||||||||||||||||||||||||||||||||||||    ||||| |||||||||||
Sbjct: 1  ttatgcctggctccctgtatgccacaagcagaagttcaatctgtttctcgattggctatt 60

                                      
Query: 66 gtgggtggcgtacaaggagccaagcata 93
          | ||||||||||  ||||| ||||||||
Sbjct: 61 gcgggtggcgtatgaggagtcaagcata 88


>mdm-MIR160d_MI0023007_89
          Length = 89

 Score =  101 bits (51), Expect = 4e-23
 Identities = 79/88 (89%), Gaps = 4/88 (4%)
 Strand = Plus / Plus

                                                                      
Query: 10 ttatgcctggctccctgtatgccacaagcagaagttcaa----tttcttgattggctatt 65
          |||||||||||||||||||||||||||||||||||||||    ||||| |||||||||||
Sbjct: 1  ttatgcctggctccctgtatgccacaagcagaagttcaatctgtttctcgattggctatt 60

                                      
Query: 66 gtgggtggcgtacaaggagccaagcata 93
          | ||||||||||  ||||| ||||||||
Sbjct: 61 gcgggtggcgtatgaggagtcaagcata 88


>ptc-MIR160a_MI0002201_Populus_trichocarpa_miR160a_stem-loop_102
          Length = 102

 Score = 67.9 bits (34), Expect = 5e-13
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                            
Query: 6  tgggttatgcctggctccctgtatgccacaagca 39
          ||||||||||||||||||||||||||||||||||
Sbjct: 4  tgggttatgcctggctccctgtatgccacaagca 37


>rco-MIR160b_MI0013380_Ricinus_communis_miR160b_stem-loop_96
          Length = 96

 Score = 65.9 bits (33), Expect = 2e-12
 Identities = 78/93 (83%), Gaps = 5/93 (5%)
 Strand = Plus / Plus

                                                                      
Query: 8  ggttatgcctggctccctgtatgccacaagcagaagttcaatttctt-----gattggct 62
          |||||||||||||||||||||||||||||||   |||||| |  |||     ||||||||
Sbjct: 1  ggttatgcctggctccctgtatgccacaagctagagttcattcccttccatggattggct 60

                                           
Query: 63 attgtgggtggcgtacaaggagccaagcatact 95
          ||||  |||||||| | ||||||||||||||||
Sbjct: 61 attgccggtggcgtgcgaggagccaagcatact 93


>ptc-MIR160d_MI0002204_Populus_trichocarpa_miR160d_stem-loop_103
          Length = 103

 Score = 60.0 bits (30), Expect = 1e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                        
Query: 6  tgggttatgcctggctccctgtatgccaca 35
          ||||||||||||||||||||||||||||||
Sbjct: 4  tgggttatgcctggctccctgtatgccaca 33



 Score = 38.2 bits (19), Expect = 5e-04
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                     
Query: 69 ggtggcgtacaaggagccaagcatact 95
          |||||||| | ||||||||||||||||
Sbjct: 73 ggtggcgtgcgaggagccaagcatact 99


>ath-MIR160c_MI0000192_Arabidopsis_thaliana_miR160c_stem-loop_89
          Length = 89

 Score = 52.0 bits (26), Expect = 3e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 9  gttatgcctggctccctgtatgccac 34
          ||||||||||||||||||||||||||
Sbjct: 1  gttatgcctggctccctgtatgccac 26



 Score = 40.1 bits (20), Expect = 1e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 69 ggtggcgtacaaggagccaagcat 92
          |||||||||||||||| |||||||
Sbjct: 63 ggtggcgtacaaggagtcaagcat 86


>aly-MIR160c_MI0014523_Arabidopsis_lyrata_miR160c_stem-loop_119
          Length = 119

 Score = 52.0 bits (26), Expect = 3e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 9  gttatgcctggctccctgtatgccac 34
          ||||||||||||||||||||||||||
Sbjct: 20 gttatgcctggctccctgtatgccac 45



 Score = 48.1 bits (24), Expect = 5e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 69  ggtggcgtacaaggagccaagcat 92
           ||||||||||||||||||||||||
Sbjct: 81  ggtggcgtacaaggagccaagcat 104


>vvi-MIR160c_MI0006498_Vitis_vinifera_miR160c_stem-loop_106
          Length = 106

 Score = 52.0 bits (26), Expect = 3e-08
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                        
Query: 6  tgggttatgcctggctccctgtatgccaca 35
          |||||| |||||||||||||||||||||||
Sbjct: 4  tgggttgtgcctggctccctgtatgccaca 33



 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 37/41 (90%), Gaps = 1/41 (2%)
 Strand = Plus / Plus

                                                   
Query: 55 gattggctatt-gtgggtggcgtacaaggagccaagcatac 94
          ||||||||||| | ||||||||| | |||||||||||||||
Sbjct: 57 gattggctatttgcgggtggcgtgcgaggagccaagcatac 97


>tae-MIR160_MI0006172_Triticum_aestivum_miR160_stem-loop_148
          Length = 148

 Score = 50.1 bits (25), Expect = 1e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 6  tgggttatgcctggctccctgtatgccac 34
          |||| ||||||||||||||||||||||||
Sbjct: 15 tgggatatgcctggctccctgtatgccac 43


>bdi-MIR160a_MI0018086_Brachypodium_distachyon_miR160a_stem-
          loop_175
          Length = 175

 Score = 50.1 bits (25), Expect = 1e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 6  tgggttatgcctggctccctgtatgccac 34
          |||| ||||||||||||||||||||||||
Sbjct: 25 tgggatatgcctggctccctgtatgccac 53


>aly-MIR160b_MI0014522_Arabidopsis_lyrata_miR160b_stem-loop_125
          Length = 125

 Score = 50.1 bits (25), Expect = 1e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 13 tgcctggctccctgtatgccacaag 37
          |||||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccacaag 45


>ath-MIR160b_MI0000191_Arabidopsis_thaliana_miR160b_stem-loop_89
          Length = 89

 Score = 50.1 bits (25), Expect = 1e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 13 tgcctggctccctgtatgccacaag 37
          |||||||||||||||||||||||||
Sbjct: 5  tgcctggctccctgtatgccacaag 29


>osa-MIR160d_MI0000666_Oryza_sativa_miR160d_stem-loop_142
          Length = 142

 Score = 48.1 bits (24), Expect = 5e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 11 tatgcctggctccctgtatgccac 34
          ||||||||||||||||||||||||
Sbjct: 6  tatgcctggctccctgtatgccac 29


>zma-MIR160e_MI0001479_Zea_mays_miR160e_stem-loop_94
          Length = 94

 Score = 48.1 bits (24), Expect = 5e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 11 tatgcctggctccctgtatgccac 34
          ||||||||||||||||||||||||
Sbjct: 7  tatgcctggctccctgtatgccac 30


>far-MIR160_MI0016604_Festuca_arundinacea_miR160_stem-loop_148
          Length = 148

 Score = 48.1 bits (24), Expect = 5e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 12 atgcctggctccctgtatgccaca 35
          ||||||||||||||||||||||||
Sbjct: 52 atgcctggctccctgtatgccaca 75


>bdi-MIR160b_MI0018093_Brachypodium_distachyon_miR160b_stem-loop_146
          Length = 146

 Score = 48.1 bits (24), Expect = 5e-07
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 65  tgtgggtggcgtacaaggagccaagcat 92
           |||||||||||| |||||||||||||||
Sbjct: 86  tgtgggtggcgtgcaaggagccaagcat 113



 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 13 tgcctggctccctgtatgccaca 35
          |||||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgccaca 53


>osa-MIR160b_MI0000664_Oryza_sativa_miR160b_stem-loop_139
          Length = 139

 Score = 48.1 bits (24), Expect = 5e-07
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 65  tgtgggtggcgtacaaggagccaagcat 92
           |||||||||||| |||||||||||||||
Sbjct: 85  tgtgggtggcgtgcaaggagccaagcat 112



 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 13 tgcctggctccctgtatgccac 34
          ||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51


>bdi-MIR160c_MI0018100_Brachypodium_distachyon_miR160c_stem-loop_148
          Length = 148

 Score = 48.1 bits (24), Expect = 5e-07
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 65  tgtgggtggcgtacaaggagccaagcat 92
           |||||||||||| |||||||||||||||
Sbjct: 88  tgtgggtggcgtgcaaggagccaagcat 115



 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 13 tgcctggctccctgtatgccaca 35
          |||||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgccaca 53


>zma-MIR160d_MI0001467_Zea_mays_miR160d_stem-loop_142
          Length = 142

 Score = 48.1 bits (24), Expect = 5e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 11 tatgcctggctccctgtatgccac 34
          ||||||||||||||||||||||||
Sbjct: 19 tatgcctggctccctgtatgccac 42


>zma-MIR160b_MI0001468_Zea_mays_miR160b_stem-loop_121
          Length = 121

 Score = 48.1 bits (24), Expect = 5e-07
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 65  tgtgggtggcgtacaaggagccaagcat 92
           |||||||||||| |||||||||||||||
Sbjct: 75  tgtgggtggcgtgcaaggagccaagcat 102



 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 13 tgcctggctccctgtatgccaca 35
          |||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccaca 43


>zma-MIR160g_MI0013192_Zea_mays_miR160g_stem-loop_86
          Length = 86

 Score = 48.1 bits (24), Expect = 5e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 12 atgcctggctccctgtatgccaca 35
          ||||||||||||||||||||||||
Sbjct: 1  atgcctggctccctgtatgccaca 24



 Score = 48.1 bits (24), Expect = 5e-07
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 65 tgtgggtggcgtacaaggagccaagcat 92
          |||||||||||| |||||||||||||||
Sbjct: 57 tgtgggtggcgtgcaaggagccaagcat 84


>tcc-MIR160b_MI0017461_Theobroma_cacao_miR160b_stem-loop_120
          Length = 120

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 tatgcctggctccctgtatgcca 33
          |||||||||||||||||||||||
Sbjct: 19 tatgcctggctccctgtatgcca 41


>bra-MIR160a_MI0010650_Brassica_rapa_miR160a_stem-loop_127
          Length = 127

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 tatgcctggctccctgtatgcca 33
          |||||||||||||||||||||||
Sbjct: 24 tatgcctggctccctgtatgcca 46


>vvi-MIR160e_MI0006501_Vitis_vinifera_miR160e_stem-loop_102
          Length = 102

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 tatgcctggctccctgtatgcca 33
          |||||||||||||||||||||||
Sbjct: 9  tatgcctggctccctgtatgcca 31


>sly-MIR160a_MI0008357_Solanum_lycopersicum_miR160a_stem-loop_129
          Length = 129

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 tatgcctggctccctgtatgcca 33
          |||||||||||||||||||||||
Sbjct: 18 tatgcctggctccctgtatgcca 40


>aly-MIR160a_MI0014521_Arabidopsis_lyrata_miR160a_stem-loop_158
          Length = 158

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 tatgcctggctccctgtatgcca 33
          |||||||||||||||||||||||
Sbjct: 40 tatgcctggctccctgtatgcca 62


>pab-MIR160a_MI0016116_Picea_abies_miR160a_stem-loop_106
          Length = 106

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 13 tgcctggctccctgtatgccaca 35
          |||||||||||||||||||||||
Sbjct: 14 tgcctggctccctgtatgccaca 36



 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 69 ggtggcgtacaaggagccaagcatac 94
          |||||| |||||||||||||||||||
Sbjct: 71 ggtggcttacaaggagccaagcatac 96


>zma-MIR160a_MI0001465_Zea_mays_miR160a_stem-loop_104
          Length = 104

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 13 tgcctggctccctgtatgccaca 35
          |||||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgccaca 32



 Score = 40.1 bits (20), Expect = 1e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 65 tgtgggtggcgtacaaggagccaagcat 92
          |||||||||||| ||||| |||||||||
Sbjct: 69 tgtgggtggcgtgcaaggggccaagcat 96


>ath-MIR160a_MI0000190_Arabidopsis_thaliana_miR160a_stem-loop_85
          Length = 85

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 tatgcctggctccctgtatgcca 33
          |||||||||||||||||||||||
Sbjct: 2  tatgcctggctccctgtatgcca 24


>sbi-MIR160b_MI0001510_Sorghum_bicolor_miR160b_stem-loop_82
          Length = 82

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 13 tgcctggctccctgtatgccaca 35
          |||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccaca 23



 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 65 tgtgggtggcgtacaaggagccaagca 91
          |||||||||||| ||||||||||||||
Sbjct: 56 tgtgggtggcgtgcaaggagccaagca 82


>osa-MIR160a_MI0000663_Oryza_sativa_miR160a_stem-loop_88
          Length = 88

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 13 tgcctggctccctgtatgccaca 35
          |||||||||||||||||||||||
Sbjct: 4  tgcctggctccctgtatgccaca 26



 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 67 tgggtggcgtacaaggagccaagcat 92
          |||||||||| |||||||||||||||
Sbjct: 61 tgggtggcgtgcaaggagccaagcat 86


>sbi-MIR160a_MI0001508_Sorghum_bicolor_miR160a_stem-loop_84
          Length = 84

 Score = 46.1 bits (23), Expect = 2e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 13 tgcctggctccctgtatgccaca 35
          |||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccaca 23



 Score = 38.2 bits (19), Expect = 5e-04
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                     
Query: 65 tgtgggtggcgtacaaggagccaagca 91
          |||||||||||| ||||| ||||||||
Sbjct: 58 tgtgggtggcgtgcaaggggccaagca 84


>ppt-MIR160a_MI0005655_Physcomitrella_patens_miR160a_stem-loop_99
          Length = 99

 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 13 tgcctggctccctgtatgccac 34
          ||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32


>zma-MIR160f_MI0001848_Zea_mays_miR160f_stem-loop_116
          Length = 116

 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tatgcctggctccctgtatgcc 32
          ||||||||||||||||||||||
Sbjct: 19 tatgcctggctccctgtatgcc 40


>vvi-MIR160d_MI0006499_Vitis_vinifera_miR160d_stem-loop_102
          Length = 102

 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 atgcctggctccctgtatgcca 33
          ||||||||||||||||||||||
Sbjct: 10 atgcctggctccctgtatgcca 31


>zma-MIR160c_MI0001466_Zea_mays_miR160c_stem-loop_100
          Length = 100

 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 13 tgcctggctccctgtatgccac 34
          ||||||||||||||||||||||
Sbjct: 7  tgcctggctccctgtatgccac 28


>sbi-MIR160c_MI0001509_Sorghum_bicolor_miR160c_stem-loop_83
          Length = 83

 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 13 tgcctggctccctgtatgccac 34
          ||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccac 22


>smo-MIR160b_MI0006052_Selaginella_moellendorffii_miR160b_stem-
          loop_108
          Length = 108

 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 13 tgcctggctccctgtatgccac 34
          ||||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgccac 34


>sbi-MIR160e_MI0001511_Sorghum_bicolor_miR160e_stem-loop_95
          Length = 95

 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 13 tgcctggctccctgtatgccac 34
          ||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccac 22


>sbi-MIR160d_MI0001507_Sorghum_bicolor_miR160d_stem-loop_100
          Length = 100

 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 13 tgcctggctccctgtatgccac 34
          ||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccac 22


>bdi-MIR160d_MI0018106_Brachypodium_distachyon_miR160d_stem-
          loop_150
          Length = 150

 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 13 tgcctggctccctgtatgccac 34
          ||||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgccac 52


>osa-MIR160e_MI0001100_Oryza_sativa_miR160e_stem-loop_114
          Length = 114

 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 tatgcctggctccctgtatgcc 32
          ||||||||||||||||||||||
Sbjct: 9  tatgcctggctccctgtatgcc 30


>ttu-MIR160_MI0016454_Triticum_turgidum_miR160_stem-loop_100
          Length = 100

 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 13 tgcctggctccctgtatgccac 34
          ||||||||||||||||||||||
Sbjct: 9  tgcctggctccctgtatgccac 30


>osa-MIR160c_MI0000665_Oryza_sativa_miR160c_stem-loop_99
          Length = 99

 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 13 tgcctggctccctgtatgccac 34
          ||||||||||||||||||||||
Sbjct: 7  tgcctggctccctgtatgccac 28


>ppt-MIR160f_MI0005902_Physcomitrella_patens_miR160f_stem-loop_138
          Length = 138

 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 13 tgcctggctccctgtatgccac 34
          ||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51


>ppt-MIR160e_MI0005901_Physcomitrella_patens_miR160e_stem-loop_138
          Length = 138

 Score = 44.1 bits (22), Expect = 8e-06
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 13 tgcctggctccctgtatgccac 34
          ||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51


>ppt-MIR160i_MI0005905_Physcomitrella_patens_miR160i_stem-loop_139
          Length = 139

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 14 gcctggctccctgtatgccac 34
          |||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51


>vun-MIR160_MI0019568_Vigna_unguiculata_miR160_stem-loop_117
          Length = 117

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 13 tgcctggctccctgtatgcca 33
          |||||||||||||||||||||
Sbjct: 18 tgcctggctccctgtatgcca 38


>aau-MIR160_MI0018979_Acacia_auriculiformis_miR160_stem-loop_88
          Length = 88

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 13 tgcctggctccctgtatgcca 33
          |||||||||||||||||||||
Sbjct: 84 tgcctggctccctgtatgcca 64


>mtr-MIR160e_MI0005629_Medicago_truncatula_miR160e_stem-loop_91
          Length = 91

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 13 tgcctggctccctgtatgcca 33
          |||||||||||||||||||||
Sbjct: 6  tgcctggctccctgtatgcca 26


>gma-MIR160b_MI0017821_Glycine_max_miR160b_stem-loop_90
          Length = 90

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 13 tgcctggctccctgtatgcca 33
          |||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgcca 30


>gma-MIR160c_MI0017822_Glycine_max_miR160c_stem-loop_91
          Length = 91

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 13 tgcctggctccctgtatgcca 33
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21


>ptc-MIR160b_MI0002202_Populus_trichocarpa_miR160b_stem-loop_98
          Length = 98

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 13 tgcctggctccctgtatgcca 33
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31


>gma-MIR160e_MI0017824_Glycine_max_miR160e_stem-loop_90
          Length = 90

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 13 tgcctggctccctgtatgcca 33
          |||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgcca 30


>rco-MIR160a_MI0013379_Ricinus_communis_miR160a_stem-loop_92
          Length = 92

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 13 tgcctggctccctgtatgcca 33
          |||||||||||||||||||||
Sbjct: 6  tgcctggctccctgtatgcca 26


>smo-MIR160a_MI0006051_Selaginella_moellendorffii_miR160a_stem-
          loop_106
          Length = 106

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 13 tgcctggctccctgtatgcca 33
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31


>mtr-MIR160b_MI0005574_Medicago_truncatula_miR160b_stem-loop_91
          Length = 91

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 13 tgcctggctccctgtatgcca 33
          |||||||||||||||||||||
Sbjct: 6  tgcctggctccctgtatgcca 26


>mtr-MIR160d_MI0005615_Medicago_truncatula_miR160d_stem-loop_91
          Length = 91

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 13 tgcctggctccctgtatgcca 33
          |||||||||||||||||||||
Sbjct: 6  tgcctggctccctgtatgcca 26


>mdm-MIR160c_MI0023006_88
          Length = 88

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 13 tgcctggctccctgtatgcca 33
          |||||||||||||||||||||
Sbjct: 5  tgcctggctccctgtatgcca 25


>aqc-MIR160b_MI0012072_Aquilegia_caerulea_miR160b_stem-loop_82
          Length = 82

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 13 tgcctggctccctgtatgcca 33
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21


>mdm-MIR160e_MI0023008_88
          Length = 88

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 13 tgcctggctccctgtatgcca 33
          |||||||||||||||||||||
Sbjct: 5  tgcctggctccctgtatgcca 25


>gma-MIR160d_MI0017823_Glycine_max_miR160d_stem-loop_91
          Length = 91

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 13 tgcctggctccctgtatgcca 33
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21


>gma-MIR160_MI0001774_Glycine_max_miR160_stem-loop_119
          Length = 119

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 13 tgcctggctccctgtatgcca 33
          |||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41


>ptc-MIR160c_MI0002203_Populus_trichocarpa_miR160c_stem-loop_98
          Length = 98

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 13 tgcctggctccctgtatgcca 33
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31


>mtr-MIR160_MI0001739_Medicago_truncatula_miR160_stem-loop_119
          Length = 119

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 13 tgcctggctccctgtatgcca 33
          |||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41


>csi-MIR160_MI0013294_Citrus_sinensis_miR160_stem-loop_143
          Length = 143

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 13 tgcctggctccctgtatgcca 33
          |||||||||||||||||||||
Sbjct: 33 tgcctggctccctgtatgcca 53


>pab-MIR160b_MI0016117_Picea_abies_miR160b_stem-loop_116
          Length = 116

 Score = 42.1 bits (21), Expect = 3e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 13 tgcctggctccctgtatgcca 33
          |||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40


>ppt-MIR160b_MI0005656_Physcomitrella_patens_miR160b_stem-loop_103
          Length = 103

 Score = 40.1 bits (20), Expect = 1e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 14 gcctggctccctgtatgcca 33
          ||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.