(329 letters)

Database: hairpin_length.fa 
           18,432 sequences; 1,887,117 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mdm-MIR7124b_MI0023159_198                                            392   e-110
mdm-MIR7124a_MI0023158_152                                            301   7e-83

>mdm-MIR7124b_MI0023159_198
          Length = 198

 Score =  392 bits (198), Expect = e-110
 Identities = 198/198 (100%)
 Strand = Plus / Minus

                                                                       
Query: 67  attaagctaatgacattatagacgacacaccaatatcaactttatttgttcattaattaa 126
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 attaagctaatgacattatagacgacacaccaatatcaactttatttgttcattaattaa 139

                                                                       
Query: 127 taccaaagccattaatacttataaagtcaatacactagaattttctttcaaagaaaattc 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 taccaaagccattaatacttataaagtcaatacactagaattttctttcaaagaaaattc 79

                                                                       
Query: 187 tagtgtaatgactttataagtattaatgaacaaataaagttgatattggtgtgtcctata 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78  tagtgtaatgactttataagtattaatgaacaaataaagttgatattggtgtgtcctata 19

                             
Query: 247 taatgttattagcttaat 264
           ||||||||||||||||||
Sbjct: 18  taatgttattagcttaat 1



 Score =  133 bits (67), Expect = 4e-32
 Identities = 76/79 (96%)
 Strand = Plus / Plus

                                                                       
Query: 136 cattaatacttataaagtcaatacactagaattttctttcaaagaaaattctagtgtaat 195
           |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |
Sbjct: 51  cattaatacttataaagtcattacactagaattttctttgaaagaaaattctagtgtatt 110

                              
Query: 196 gactttataagtattaatg 214
           |||||||||||||||||||
Sbjct: 111 gactttataagtattaatg 129


>mdm-MIR7124a_MI0023158_152
          Length = 152

 Score =  301 bits (152), Expect = 7e-83
 Identities = 152/152 (100%)
 Strand = Plus / Minus

                                                                       
Query: 90  gacacaccaatatcaactttatttgttcattaattaataccaaagccattaatacttata 149
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 gacacaccaatatcaactttatttgttcattaattaataccaaagccattaatacttata 93

                                                                       
Query: 150 aagtcaatacactagaattttctttcaaagaaaattctagtgtaatgactttataagtat 209
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  aagtcaatacactagaattttctttcaaagaaaattctagtgtaatgactttataagtat 33

                                           
Query: 210 taatgaacaaataaagttgatattggtgtgtc 241
           ||||||||||||||||||||||||||||||||
Sbjct: 32  taatgaacaaataaagttgatattggtgtgtc 1



 Score =  133 bits (67), Expect = 4e-32
 Identities = 76/79 (96%)
 Strand = Plus / Plus

                                                                       
Query: 136 cattaatacttataaagtcaatacactagaattttctttcaaagaaaattctagtgtaat 195
           |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |
Sbjct: 28  cattaatacttataaagtcattacactagaattttctttgaaagaaaattctagtgtatt 87

                              
Query: 196 gactttataagtattaatg 214
           |||||||||||||||||||
Sbjct: 88  gactttataagtattaatg 106


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.