(332 letters)

Database: hairpin_length.fa 
           18,432 sequences; 1,887,117 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

vvi-MIR169w_MI0007948_Vitis_vinifera_miR169w_stem-loop_143             56   6e-09
gma-MIR169f_MI0017836_Glycine_max_miR169f_stem-loop_170                54   3e-08
tcc-MIR169l_MI0017486_Theobroma_cacao_miR169l_stem-loop_122            52   1e-07
gma-MIR169g_MI0017837_Glycine_max_miR169g_stem-loop_130                50   4e-07
mtr-MIR169j_MI0005625_Medicago_truncatula_miR169j_stem-loop_77         50   4e-07
ptc-MIR169d_MI0002254_Populus_trichocarpa_miR169d_stem-loop_111        50   4e-07
gma-MIR169m_MI0018665_Glycine_max_miR169m_stem-loop_123                50   4e-07
tcc-MIR169k_MI0017485_Theobroma_cacao_miR169k_stem-loop_132            50   4e-07
ptc-MIR169g_MI0002257_Populus_trichocarpa_miR169g_stem-loop_106        50   4e-07
vvi-MIR169s_MI0006533_Vitis_vinifera_miR169s_stem-loop_99              50   4e-07
vvi-MIR169k_MI0006529_Vitis_vinifera_miR169k_stem-loop_122             50   4e-07
vvi-MIR169j_MI0006528_Vitis_vinifera_miR169j_stem-loop_122             50   4e-07
ptc-MIR169e_MI0002255_Populus_trichocarpa_miR169e_stem-loop_166        50   4e-07
gma-MIR169a_MI0001791_Glycine_max_miR169a_stem-loop_121                48   2e-06
tcc-MIR169a_MI0017475_Theobroma_cacao_miR169a_stem-loop_147            48   2e-06
bdi-MIR169c_MI0018126_Brachypodium_distachyon_miR169c_stem-loop_151    48   2e-06
rco-MIR169a_MI0013395_Ricinus_communis_miR169a_stem-loop_92            48   2e-06
mtr-MIR169a_MI0001741_Medicago_truncatula_miR169a_stem-loop_121        48   2e-06
sly-MIR169c_MI0008363_Solanum_lycopersicum_miR169c_stem-loop_147       48   2e-06
osa-MIR169p_MI0001131_Oryza_sativa_miR169p_stem-loop_126               48   2e-06
bdi-MIR169f_MI0018160_Brachypodium_distachyon_miR169f_stem-loop_151    48   2e-06
tcc-MIR169e_MI0017479_Theobroma_cacao_miR169e_stem-loop_147            48   2e-06
zma-MIR169c_MI0001826_Zea_mays_miR169c_stem-loop_134                   48   2e-06
ptc-MIR169f_MI0002256_Populus_trichocarpa_miR169f_stem-loop_239        48   2e-06
osa-MIR169c_MI0001118_Oryza_sativa_miR169c_stem-loop_112               48   2e-06
mtr-MIR169g_MI0005604_Medicago_truncatula_miR169g_stem-loop_211        48   2e-06
vvi-MIR169n_MI0007944_Vitis_vinifera_miR169n_stem-loop_101             48   2e-06
tcc-MIR169b_MI0017476_Theobroma_cacao_miR169b_stem-loop_193            48   2e-06
vun-MIR169_MI0019572_Vigna_unguiculata_miR169_stem-loop_110            48   2e-06
mdm-MIR169a_MI0023038_158                                              48   2e-06
sly-MIR169a_MI0008361_Solanum_lycopersicum_miR169a_stem-loop_149       46   6e-06
bdi-MIR169a_MI0018120_Brachypodium_distachyon_miR169a_stem-loop_181    46   6e-06
tcc-MIR169c_MI0017477_Theobroma_cacao_miR169c_stem-loop_142            46   6e-06
vvi-MIR169g_MI0006527_Vitis_vinifera_miR169g_stem-loop_121             46   6e-06
ptc-MIR169s_MI0002269_Populus_trichocarpa_miR169s_stem-loop_120        46   6e-06
bna-MIR169a_MI0006457_Brassica_napus_miR169a_stem-loop_132             46   6e-06
vvi-MIR169c_MI0006523_Vitis_vinifera_miR169c_stem-loop_90              46   6e-06
vvi-MIR169a_MI0006521_Vitis_vinifera_miR169a_stem-loop_124             46   6e-06
bna-MIR169b_MI0006458_Brassica_napus_miR169b_stem-loop_188             46   6e-06
zma-MIR169b_MI0001474_Zea_mays_miR169b_stem-loop_156                   46   6e-06
osa-MIR169b_MI0001117_Oryza_sativa_miR169b_stem-loop_128               46   6e-06
ath-MIR169a_MI0000212_Arabidopsis_thaliana_miR169a_stem-loop_226       46   6e-06
osa-MIR169a_MI0000679_Oryza_sativa_miR169a_stem-loop_173               46   6e-06
mtr-MIR169b_MI0001742_Medicago_truncatula_miR169b_stem-loop_121        46   6e-06
zma-MIR169a_MI0001473_Zea_mays_miR169a_stem-loop_130                   46   6e-06
aqc-MIR169c_MI0012080_Aquilegia_caerulea_miR169c_stem-loop_111         46   6e-06
aly-MIR169b_MI0014546_Arabidopsis_lyrata_miR169b_stem-loop_173         46   6e-06
vvi-MIR169f_MI0006526_Vitis_vinifera_miR169f_stem-loop_184             46   6e-06
rco-MIR169b_MI0013396_Ricinus_communis_miR169b_stem-loop_93            46   6e-06
aly-MIR169a_MI0014545_Arabidopsis_lyrata_miR169a_stem-loop_263         46   6e-06
ath-MIR169b_MI0000976_Arabidopsis_thaliana_miR169b_stem-loop_181       46   6e-06
ptc-MIR169h_MI0002258_Populus_trichocarpa_miR169h_stem-loop_118        46   6e-06
zma-MIR169p_MI0013203_Zea_mays_miR169p_stem-loop_65                    44   3e-05
zma-MIR169r_MI0013205_Zea_mays_miR169r_stem-loop_126                   44   3e-05
ptc-MIR169c_MI0002253_Populus_trichocarpa_miR169c_stem-loop_102        44   3e-05
vvi-MIR169p_MI0006531_Vitis_vinifera_miR169p_stem-loop_102             44   3e-05
ptc-MIR169b_MI0002252_Populus_trichocarpa_miR169b_stem-loop_113        44   3e-05
vvi-MIR169m_MI0006530_Vitis_vinifera_miR169m_stem-loop_102             44   3e-05
sbi-MIR169e_MI0010873_Sorghum_bicolor_miR169e_stem-loop_109            44   3e-05
ptc-MIR169a_MI0002245_Populus_trichocarpa_miR169a_stem-loop_165        44   3e-05
vvi-MIR169q_MI0007946_Vitis_vinifera_miR169q_stem-loop_97              44   3e-05
sbi-MIR169k_MI0010876_Sorghum_bicolor_miR169k_stem-loop_97             44   3e-05
gma-MIR169b_MI0007211_Glycine_max_miR169b_stem-loop_183                44   3e-05
sbi-MIR169j_MI0010875_Sorghum_bicolor_miR169j_stem-loop_123            42   1e-04
gma-MIR169e_MI0016576_Glycine_max_miR169e_stem-loop_120                42   1e-04
osa-MIR169e_MI0001120_Oryza_sativa_miR169e_stem-loop_132               42   1e-04
ssp-MIR169_MI0018180_Saccharum_ssp._miR169_stem-loop_146               42   1e-04
aly-MIR169c_MI0014547_Arabidopsis_lyrata_miR169c_stem-loop_292         42   1e-04
gma-MIR169h_MI0017912_Glycine_max_miR169h_stem-loop_151                42   1e-04
sbi-MIR169b_MI0001515_Sorghum_bicolor_miR169b_stem-loop_102            42   1e-04
ath-MIR169c_MI0000977_Arabidopsis_thaliana_miR169c_stem-loop_411       42   1e-04
ath-MIR169f_MI0000980_Arabidopsis_thaliana_miR169f_stem-loop_167       40   4e-04
sbi-MIR169a_MI0001516_Sorghum_bicolor_miR169a_stem-loop_91             40   4e-04
aly-MIR169f_MI0014550_Arabidopsis_lyrata_miR169f_stem-loop_184         40   4e-04
bdi-MIR169b_MI0011574_Brachypodium_distachyon_miR169b_stem-loop_106    40   4e-04
mtr-MIR169d_MI0005578_Medicago_truncatula_miR169d_stem-loop_240        40   4e-04
mtr-MIR169e_MI0005579_Medicago_truncatula_miR169e_stem-loop_101        40   4e-04
tcc-MIR169m_MI0017487_Theobroma_cacao_miR169m_stem-loop_124            40   4e-04
gma-MIR169d_MI0016571_Glycine_max_miR169d_stem-loop_88                 40   4e-04
aly-MIR169g_MI0014551_Arabidopsis_lyrata_miR169g_stem-loop_202         40   4e-04
mtr-MIR169l_MI0005631_Medicago_truncatula_miR169l_stem-loop_240        40   4e-04
ath-MIR169g_MI0000981_Arabidopsis_thaliana_miR169g_stem-loop_379       40   4e-04
mtr-MIR169m_MI0005630_Medicago_truncatula_miR169m_stem-loop_100        40   4e-04

>vvi-MIR169w_MI0007948_Vitis_vinifera_miR169w_stem-loop_143
          Length = 143

 Score = 56.1 bits (28), Expect = 6e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 59 gtgcagccaaggatgacttgccggcaac 86
          ||||||||||||||||||||||||||||
Sbjct: 10 gtgcagccaaggatgacttgccggcaac 37


>gma-MIR169f_MI0017836_Glycine_max_miR169f_stem-loop_170
          Length = 170

 Score = 54.1 bits (27), Expect = 3e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 58 agtgcagccaaggatgacttgccggca 84
          |||||||||||||||||||||||||||
Sbjct: 28 agtgcagccaaggatgacttgccggca 54


>tcc-MIR169l_MI0017486_Theobroma_cacao_miR169l_stem-loop_122
          Length = 122

 Score = 52.2 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 58 agtgcagccaaggatgacttgccggc 83
          ||||||||||||||||||||||||||
Sbjct: 17 agtgcagccaaggatgacttgccggc 42


>gma-MIR169g_MI0017837_Glycine_max_miR169g_stem-loop_130
          Length = 130

 Score = 50.2 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 58 agtgcagccaaggatgacttgccgg 82
          |||||||||||||||||||||||||
Sbjct: 7  agtgcagccaaggatgacttgccgg 31


>mtr-MIR169j_MI0005625_Medicago_truncatula_miR169j_stem-loop_77
          Length = 77

 Score = 50.2 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 58 agtgcagccaaggatgacttgccgg 82
          |||||||||||||||||||||||||
Sbjct: 2  agtgcagccaaggatgacttgccgg 26


>ptc-MIR169d_MI0002254_Populus_trichocarpa_miR169d_stem-loop_111
          Length = 111

 Score = 50.2 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 60 tgcagccaaggatgacttgccggca 84
          |||||||||||||||||||||||||
Sbjct: 9  tgcagccaaggatgacttgccggca 33


>gma-MIR169m_MI0018665_Glycine_max_miR169m_stem-loop_123
          Length = 123

 Score = 50.2 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 58 agtgcagccaaggatgacttgccgg 82
          |||||||||||||||||||||||||
Sbjct: 9  agtgcagccaaggatgacttgccgg 33


>tcc-MIR169k_MI0017485_Theobroma_cacao_miR169k_stem-loop_132
          Length = 132

 Score = 50.2 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 59 gtgcagccaaggatgacttgccggc 83
          |||||||||||||||||||||||||
Sbjct: 18 gtgcagccaaggatgacttgccggc 42


>ptc-MIR169g_MI0002257_Populus_trichocarpa_miR169g_stem-loop_106
          Length = 106

 Score = 50.2 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 60 tgcagccaaggatgacttgccggca 84
          |||||||||||||||||||||||||
Sbjct: 9  tgcagccaaggatgacttgccggca 33


>vvi-MIR169s_MI0006533_Vitis_vinifera_miR169s_stem-loop_99
          Length = 99

 Score = 50.2 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 60 tgcagccaaggatgacttgccggca 84
          |||||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccggca 35


>vvi-MIR169k_MI0006529_Vitis_vinifera_miR169k_stem-loop_122
          Length = 122

 Score = 50.2 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 58 agtgcagccaaggatgacttgccgg 82
          |||||||||||||||||||||||||
Sbjct: 9  agtgcagccaaggatgacttgccgg 33


>vvi-MIR169j_MI0006528_Vitis_vinifera_miR169j_stem-loop_122
          Length = 122

 Score = 50.2 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 58 agtgcagccaaggatgacttgccgg 82
          |||||||||||||||||||||||||
Sbjct: 9  agtgcagccaaggatgacttgccgg 33


>ptc-MIR169e_MI0002255_Populus_trichocarpa_miR169e_stem-loop_166
          Length = 166

 Score = 50.2 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 61 gcagccaaggatgacttgccggcaa 85
          |||||||||||||||||||||||||
Sbjct: 10 gcagccaaggatgacttgccggcaa 34


>gma-MIR169a_MI0001791_Glycine_max_miR169a_stem-loop_121
          Length = 121

 Score = 48.2 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 60 tgcagccaaggatgacttgccggc 83
          ||||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccggc 42


>tcc-MIR169a_MI0017475_Theobroma_cacao_miR169a_stem-loop_147
          Length = 147

 Score = 48.2 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 58 agtgcagccaaggatgacttgccg 81
          ||||||||||||||||||||||||
Sbjct: 17 agtgcagccaaggatgacttgccg 40


>bdi-MIR169c_MI0018126_Brachypodium_distachyon_miR169c_stem-
          loop_151
          Length = 151

 Score = 48.2 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 60 tgcagccaaggatgacttgccggc 83
          ||||||||||||||||||||||||
Sbjct: 31 tgcagccaaggatgacttgccggc 54


>rco-MIR169a_MI0013395_Ricinus_communis_miR169a_stem-loop_92
          Length = 92

 Score = 48.2 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 62 cagccaaggatgacttgccggcaacaat 89
          ||||||||||||||||||||||| ||||
Sbjct: 6  cagccaaggatgacttgccggcatcaat 33


>mtr-MIR169a_MI0001741_Medicago_truncatula_miR169a_stem-loop_121
          Length = 121

 Score = 48.2 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 60 tgcagccaaggatgacttgccggcaaca 87
          |||||||||||||||||||||| |||||
Sbjct: 19 tgcagccaaggatgacttgccgacaaca 46


>sly-MIR169c_MI0008363_Solanum_lycopersicum_miR169c_stem-loop_147
          Length = 147

 Score = 48.2 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 58 agtgcagccaaggatgacttgccg 81
          ||||||||||||||||||||||||
Sbjct: 37 agtgcagccaaggatgacttgccg 60


>osa-MIR169p_MI0001131_Oryza_sativa_miR169p_stem-loop_126
          Length = 126

 Score = 48.2 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 60  tgcagccaaggatgacttgccggc 83
           ||||||||||||||||||||||||
Sbjct: 118 tgcagccaaggatgacttgccggc 95


>bdi-MIR169f_MI0018160_Brachypodium_distachyon_miR169f_stem-
          loop_151
          Length = 151

 Score = 48.2 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 60 tgcagccaaggatgacttgccggc 83
          ||||||||||||||||||||||||
Sbjct: 31 tgcagccaaggatgacttgccggc 54


>tcc-MIR169e_MI0017479_Theobroma_cacao_miR169e_stem-loop_147
          Length = 147

 Score = 48.2 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 58 agtgcagccaaggatgacttgccg 81
          ||||||||||||||||||||||||
Sbjct: 17 agtgcagccaaggatgacttgccg 40


>zma-MIR169c_MI0001826_Zea_mays_miR169c_stem-loop_134
          Length = 134

 Score = 48.2 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 60 tgcagccaaggatgacttgccggc 83
          ||||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccggc 42


>ptc-MIR169f_MI0002256_Populus_trichocarpa_miR169f_stem-loop_239
          Length = 239

 Score = 48.2 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 59 gtgcagccaaggatgacttgccgg 82
          ||||||||||||||||||||||||
Sbjct: 8  gtgcagccaaggatgacttgccgg 31


>osa-MIR169c_MI0001118_Oryza_sativa_miR169c_stem-loop_112
          Length = 112

 Score = 48.2 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 60 tgcagccaaggatgacttgccggc 83
          ||||||||||||||||||||||||
Sbjct: 9  tgcagccaaggatgacttgccggc 32


>mtr-MIR169g_MI0005604_Medicago_truncatula_miR169g_stem-loop_211
          Length = 211

 Score = 48.2 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 60 tgcagccaaggatgacttgccggc 83
          ||||||||||||||||||||||||
Sbjct: 4  tgcagccaaggatgacttgccggc 27



 Score = 42.2 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 255 cggcaagtcgtctctggctac 275
           |||||||||||||||||||||
Sbjct: 188 cggcaagtcgtctctggctac 208


>vvi-MIR169n_MI0007944_Vitis_vinifera_miR169n_stem-loop_101
          Length = 101

 Score = 48.2 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 63 agccaaggatgacttgccggcaac 86
          ||||||||||||||||||||||||
Sbjct: 13 agccaaggatgacttgccggcaac 36


>tcc-MIR169b_MI0017476_Theobroma_cacao_miR169b_stem-loop_193
          Length = 193

 Score = 48.2 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 247 gagttgatcggcaagtcgtctctggcta 274
           ||||| ||||||||||||||||||||||
Sbjct: 146 gagtttatcggcaagtcgtctctggcta 173



 Score = 46.2 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 60 tgcagccaaggatgacttgccgg 82
          |||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccgg 41


>vun-MIR169_MI0019572_Vigna_unguiculata_miR169_stem-loop_110
          Length = 110

 Score = 48.2 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 60 tgcagccaaggatgacttgccggc 83
          ||||||||||||||||||||||||
Sbjct: 13 tgcagccaaggatgacttgccggc 36


>mdm-MIR169a_MI0023038_158
          Length = 158

 Score = 48.2 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 60 tgcagccaaggatgacttgccggc 83
          ||||||||||||||||||||||||
Sbjct: 40 tgcagccaaggatgacttgccggc 63


>sly-MIR169a_MI0008361_Solanum_lycopersicum_miR169a_stem-loop_149
          Length = 149

 Score = 46.2 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 60 tgcagccaaggatgacttgccgg 82
          |||||||||||||||||||||||
Sbjct: 39 tgcagccaaggatgacttgccgg 61


>bdi-MIR169a_MI0018120_Brachypodium_distachyon_miR169a_stem-
          loop_181
          Length = 181

 Score = 46.2 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 59 gtgcagccaaggatgacttgccg 81
          |||||||||||||||||||||||
Sbjct: 63 gtgcagccaaggatgacttgccg 85


>tcc-MIR169c_MI0017477_Theobroma_cacao_miR169c_stem-loop_142
          Length = 142

 Score = 46.2 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 59 gtgcagccaaggatgacttgccg 81
          |||||||||||||||||||||||
Sbjct: 18 gtgcagccaaggatgacttgccg 40



 Score = 44.2 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 256 ggcaagtcgtctctggctacattttt 281
           |||||||||||| |||||||||||||
Sbjct: 104 ggcaagtcgtctttggctacattttt 129


>vvi-MIR169g_MI0006527_Vitis_vinifera_miR169g_stem-loop_121
          Length = 121

 Score = 46.2 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 59 gtgcagccaaggatgacttgccg 81
          |||||||||||||||||||||||
Sbjct: 10 gtgcagccaaggatgacttgccg 32


>ptc-MIR169s_MI0002269_Populus_trichocarpa_miR169s_stem-loop_120
          Length = 120

 Score = 46.2 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 62 cagccaaggatgacttgccggca 84
          |||||||||||||||||||||||
Sbjct: 12 cagccaaggatgacttgccggca 34


>bna-MIR169a_MI0006457_Brassica_napus_miR169a_stem-loop_132
          Length = 132

 Score = 46.2 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 59 gtgcagccaaggatgacttgccg 81
          |||||||||||||||||||||||
Sbjct: 16 gtgcagccaaggatgacttgccg 38


>vvi-MIR169c_MI0006523_Vitis_vinifera_miR169c_stem-loop_90
          Length = 90

 Score = 46.2 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 60 tgcagccaaggatgacttgccgg 82
          |||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccgg 33


>vvi-MIR169a_MI0006521_Vitis_vinifera_miR169a_stem-loop_124
          Length = 124

 Score = 46.2 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 60 tgcagccaaggatgacttgccgg 82
          |||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccgg 33


>bna-MIR169b_MI0006458_Brassica_napus_miR169b_stem-loop_188
          Length = 188

 Score = 46.2 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 59 gtgcagccaaggatgacttgccg 81
          |||||||||||||||||||||||
Sbjct: 15 gtgcagccaaggatgacttgccg 37


>zma-MIR169b_MI0001474_Zea_mays_miR169b_stem-loop_156
          Length = 156

 Score = 46.2 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 59 gtgcagccaaggatgacttgccg 81
          |||||||||||||||||||||||
Sbjct: 18 gtgcagccaaggatgacttgccg 40


>osa-MIR169b_MI0001117_Oryza_sativa_miR169b_stem-loop_128
          Length = 128

 Score = 46.2 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 60 tgcagccaaggatgacttgccgg 82
          |||||||||||||||||||||||
Sbjct: 9  tgcagccaaggatgacttgccgg 31


>ath-MIR169a_MI0000212_Arabidopsis_thaliana_miR169a_stem-loop_226
          Length = 226

 Score = 46.2 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 59 gtgcagccaaggatgacttgccg 81
          |||||||||||||||||||||||
Sbjct: 15 gtgcagccaaggatgacttgccg 37


>osa-MIR169a_MI0000679_Oryza_sativa_miR169a_stem-loop_173
          Length = 173

 Score = 46.2 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 59 gtgcagccaaggatgacttgccg 81
          |||||||||||||||||||||||
Sbjct: 35 gtgcagccaaggatgacttgccg 57


>mtr-MIR169b_MI0001742_Medicago_truncatula_miR169b_stem-loop_121
          Length = 121

 Score = 46.2 bits (23), Expect = 6e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 60 tgcagccaaggatgacttgccggcaac 86
          |||||||||||||||||||||| ||||
Sbjct: 19 tgcagccaaggatgacttgccgacaac 45


>zma-MIR169a_MI0001473_Zea_mays_miR169a_stem-loop_130
          Length = 130

 Score = 46.2 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 59 gtgcagccaaggatgacttgccg 81
          |||||||||||||||||||||||
Sbjct: 18 gtgcagccaaggatgacttgccg 40


>aqc-MIR169c_MI0012080_Aquilegia_caerulea_miR169c_stem-loop_111
          Length = 111

 Score = 46.2 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 60 tgcagccaaggatgacttgccgg 82
          |||||||||||||||||||||||
Sbjct: 3  tgcagccaaggatgacttgccgg 25


>aly-MIR169b_MI0014546_Arabidopsis_lyrata_miR169b_stem-loop_173
          Length = 173

 Score = 46.2 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 60 tgcagccaaggatgacttgccgg 82
          |||||||||||||||||||||||
Sbjct: 44 tgcagccaaggatgacttgccgg 66


>vvi-MIR169f_MI0006526_Vitis_vinifera_miR169f_stem-loop_184
          Length = 184

 Score = 46.2 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 59 gtgcagccaaggatgacttgccg 81
          |||||||||||||||||||||||
Sbjct: 10 gtgcagccaaggatgacttgccg 32


>rco-MIR169b_MI0013396_Ricinus_communis_miR169b_stem-loop_93
          Length = 93

 Score = 46.2 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 62 cagccaaggatgacttgccggca 84
          |||||||||||||||||||||||
Sbjct: 6  cagccaaggatgacttgccggca 28


>aly-MIR169a_MI0014545_Arabidopsis_lyrata_miR169a_stem-loop_263
          Length = 263

 Score = 46.2 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 59 gtgcagccaaggatgacttgccg 81
          |||||||||||||||||||||||
Sbjct: 24 gtgcagccaaggatgacttgccg 46


>ath-MIR169b_MI0000976_Arabidopsis_thaliana_miR169b_stem-loop_181
          Length = 181

 Score = 46.2 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 60 tgcagccaaggatgacttgccgg 82
          |||||||||||||||||||||||
Sbjct: 41 tgcagccaaggatgacttgccgg 63


>ptc-MIR169h_MI0002258_Populus_trichocarpa_miR169h_stem-loop_118
          Length = 118

 Score = 46.2 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 62 cagccaaggatgacttgccggca 84
          |||||||||||||||||||||||
Sbjct: 11 cagccaaggatgacttgccggca 33


>zma-MIR169p_MI0013203_Zea_mays_miR169p_stem-loop_65
          Length = 65

 Score = 44.2 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 63 agccaaggatgacttgccggca 84
          ||||||||||||||||||||||
Sbjct: 3  agccaaggatgacttgccggca 24


>zma-MIR169r_MI0013205_Zea_mays_miR169r_stem-loop_126
          Length = 126

 Score = 44.2 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 61 gcagccaaggatgacttgccgg 82
          ||||||||||||||||||||||
Sbjct: 1  gcagccaaggatgacttgccgg 22


>ptc-MIR169c_MI0002253_Populus_trichocarpa_miR169c_stem-loop_102
          Length = 102

 Score = 44.2 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 60 tgcagccaaggatgacttgccg 81
          ||||||||||||||||||||||
Sbjct: 9  tgcagccaaggatgacttgccg 30


>vvi-MIR169p_MI0006531_Vitis_vinifera_miR169p_stem-loop_102
          Length = 102

 Score = 44.2 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 63 agccaaggatgacttgccggca 84
          ||||||||||||||||||||||
Sbjct: 13 agccaaggatgacttgccggca 34


>ptc-MIR169b_MI0002252_Populus_trichocarpa_miR169b_stem-loop_113
          Length = 113

 Score = 44.2 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 60 tgcagccaaggatgacttgccg 81
          ||||||||||||||||||||||
Sbjct: 9  tgcagccaaggatgacttgccg 30


>vvi-MIR169m_MI0006530_Vitis_vinifera_miR169m_stem-loop_102
          Length = 102

 Score = 44.2 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 63 agccaaggatgacttgccggca 84
          ||||||||||||||||||||||
Sbjct: 13 agccaaggatgacttgccggca 34


>sbi-MIR169e_MI0010873_Sorghum_bicolor_miR169e_stem-loop_109
          Length = 109

 Score = 44.2 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 63 agccaaggatgacttgccggca 84
          ||||||||||||||||||||||
Sbjct: 2  agccaaggatgacttgccggca 23


>ptc-MIR169a_MI0002245_Populus_trichocarpa_miR169a_stem-loop_165
          Length = 165

 Score = 44.2 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 60 tgcagccaaggatgacttgccg 81
          ||||||||||||||||||||||
Sbjct: 9  tgcagccaaggatgacttgccg 30


>vvi-MIR169q_MI0007946_Vitis_vinifera_miR169q_stem-loop_97
          Length = 97

 Score = 44.2 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 63 agccaaggatgacttgccggca 84
          ||||||||||||||||||||||
Sbjct: 13 agccaaggatgacttgccggca 34


>sbi-MIR169k_MI0010876_Sorghum_bicolor_miR169k_stem-loop_97
          Length = 97

 Score = 44.2 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 62 cagccaaggatgacttgccggc 83
          ||||||||||||||||||||||
Sbjct: 1  cagccaaggatgacttgccggc 22


>gma-MIR169b_MI0007211_Glycine_max_miR169b_stem-loop_183
          Length = 183

 Score = 44.2 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 60 tgcagccaaggatgacttgccg 81
          ||||||||||||||||||||||
Sbjct: 9  tgcagccaaggatgacttgccg 30


>sbi-MIR169j_MI0010875_Sorghum_bicolor_miR169j_stem-loop_123
          Length = 123

 Score = 42.2 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 63 agccaaggatgacttgccggc 83
          |||||||||||||||||||||
Sbjct: 4  agccaaggatgacttgccggc 24


>gma-MIR169e_MI0016576_Glycine_max_miR169e_stem-loop_120
          Length = 120

 Score = 42.2 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 63 agccaaggatgacttgccggc 83
          |||||||||||||||||||||
Sbjct: 34 agccaaggatgacttgccggc 54


>osa-MIR169e_MI0001120_Oryza_sativa_miR169e_stem-loop_132
          Length = 132

 Score = 42.2 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 63 agccaaggatgacttgccggc 83
          |||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccggc 32


>ssp-MIR169_MI0018180_Saccharum_ssp._miR169_stem-loop_146
          Length = 146

 Score = 42.2 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 63 agccaaggatgacttgccggc 83
          |||||||||||||||||||||
Sbjct: 3  agccaaggatgacttgccggc 23


>aly-MIR169c_MI0014547_Arabidopsis_lyrata_miR169c_stem-loop_292
          Length = 292

 Score = 42.2 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 62 cagccaaggatgacttgccgg 82
          |||||||||||||||||||||
Sbjct: 45 cagccaaggatgacttgccgg 65


>gma-MIR169h_MI0017912_Glycine_max_miR169h_stem-loop_151
          Length = 151

 Score = 42.2 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 63 agccaaggatgacttgccggc 83
          |||||||||||||||||||||
Sbjct: 10 agccaaggatgacttgccggc 30


>sbi-MIR169b_MI0001515_Sorghum_bicolor_miR169b_stem-loop_102
          Length = 102

 Score = 42.2 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 62 cagccaaggatgacttgccgg 82
          |||||||||||||||||||||
Sbjct: 1  cagccaaggatgacttgccgg 21


>ath-MIR169c_MI0000977_Arabidopsis_thaliana_miR169c_stem-loop_411
          Length = 411

 Score = 42.2 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 62  cagccaaggatgacttgccgg 82
           |||||||||||||||||||||
Sbjct: 113 cagccaaggatgacttgccgg 133


>ath-MIR169f_MI0000980_Arabidopsis_thaliana_miR169f_stem-loop_167
          Length = 167

 Score = 40.2 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 63 agccaaggatgacttgccgg 82
          ||||||||||||||||||||
Sbjct: 34 agccaaggatgacttgccgg 53


>sbi-MIR169a_MI0001516_Sorghum_bicolor_miR169a_stem-loop_91
          Length = 91

 Score = 40.2 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 62 cagccaaggatgacttgccg 81
          ||||||||||||||||||||
Sbjct: 1  cagccaaggatgacttgccg 20


>aly-MIR169f_MI0014550_Arabidopsis_lyrata_miR169f_stem-loop_184
          Length = 184

 Score = 40.2 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 63 agccaaggatgacttgccgg 82
          ||||||||||||||||||||
Sbjct: 43 agccaaggatgacttgccgg 62


>bdi-MIR169b_MI0011574_Brachypodium_distachyon_miR169b_stem-
          loop_106
          Length = 106

 Score = 40.2 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 63 agccaaggatgacttgccgg 82
          ||||||||||||||||||||
Sbjct: 20 agccaaggatgacttgccgg 39


>mtr-MIR169d_MI0005578_Medicago_truncatula_miR169d_stem-loop_240
          Length = 240

 Score = 40.2 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 63 agccaaggatgacttgccgg 82
          ||||||||||||||||||||
Sbjct: 7  agccaaggatgacttgccgg 26


>mtr-MIR169e_MI0005579_Medicago_truncatula_miR169e_stem-loop_101
          Length = 101

 Score = 40.2 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 63 agccaaggatgacttgccgg 82
          ||||||||||||||||||||
Sbjct: 8  agccaaggatgacttgccgg 27


>tcc-MIR169m_MI0017487_Theobroma_cacao_miR169m_stem-loop_124
          Length = 124

 Score = 40.2 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 63 agccaaggatgacttgccgg 82
          ||||||||||||||||||||
Sbjct: 23 agccaaggatgacttgccgg 42


>gma-MIR169d_MI0016571_Glycine_max_miR169d_stem-loop_88
          Length = 88

 Score = 40.2 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 63 agccaaggatgacttgccgg 82
          ||||||||||||||||||||
Sbjct: 16 agccaaggatgacttgccgg 35


>aly-MIR169g_MI0014551_Arabidopsis_lyrata_miR169g_stem-loop_202
          Length = 202

 Score = 40.2 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 63 agccaaggatgacttgccgg 82
          ||||||||||||||||||||
Sbjct: 65 agccaaggatgacttgccgg 84


>mtr-MIR169l_MI0005631_Medicago_truncatula_miR169l_stem-loop_240
          Length = 240

 Score = 40.2 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 63 agccaaggatgacttgccgg 82
          ||||||||||||||||||||
Sbjct: 7  agccaaggatgacttgccgg 26


>ath-MIR169g_MI0000981_Arabidopsis_thaliana_miR169g_stem-loop_379
          Length = 379

 Score = 40.2 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 63  agccaaggatgacttgccgg 82
           ||||||||||||||||||||
Sbjct: 146 agccaaggatgacttgccgg 165


>mtr-MIR169m_MI0005630_Medicago_truncatula_miR169m_stem-loop_100
          Length = 100

 Score = 40.2 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 63 agccaaggatgacttgccgg 82
          ||||||||||||||||||||
Sbjct: 7  agccaaggatgacttgccgg 26


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.