(207 letters)

Database: hairpin_length.fa 
           18,432 sequences; 1,887,117 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

vvi-MIR319f_MI0006550_Vitis_vinifera_miR319f_stem-loop_193            186   2e-48
ptc-MIR319c_MI0002298_Populus_trichocarpa_miR319c_stem-loop_196       182   3e-47
ptc-MIR319d_MI0002299_Populus_trichocarpa_miR319d_stem-loop_193       176   2e-45
rco-MIR319c_MI0013408_Ricinus_communis_miR319c_stem-loop_188          135   6e-33
gma-MIR319k_MI0018676_Glycine_max_miR319k_stem-loop_186               133   2e-32
gma-MIR319m_MI0018678_Glycine_max_miR319m_stem-loop_190               129   4e-31
gma-MIR319e_MI0017843_Glycine_max_miR319e_stem-loop_190               127   1e-30
gma-MIR319h_MI0018673_Glycine_max_miR319h_stem-loop_186               119   4e-28
mtr-MIR319_MI0001751_Medicago_truncatula_miR319_stem-loop_207         113   2e-26
aau-MIR319_MI0018982_Acacia_auriculiformis_miR319_stem-loop_197       105   5e-24
amg-MIR319_MI0018986_Acacia_mangium_miR319_stem-loop_182              100   3e-22
ptc-MIR319f_MI0002301_Populus_trichocarpa_miR319f_stem-loop_202        92   8e-20
ptc-MIR319g_MI0002302_Populus_trichocarpa_miR319g_stem-loop_204        84   2e-17
vvi-MIR319c_MI0006549_Vitis_vinifera_miR319c_stem-loop_182             68   1e-12
vun-MIR319a_MI0019574_Vigna_unguiculata_miR319a_stem-loop_207          64   2e-11
gma-MIR319b_MI0001783_Glycine_max_miR319b_stem-loop_208                64   2e-11
gma-MIR319j_MI0018675_Glycine_max_miR319j_stem-loop_179                64   2e-11
ath-MIR319b_MI0000545_Arabidopsis_thaliana_miR319b_stem-loop_172       62   7e-11
aly-MIR319b_MI0014519_Arabidopsis_lyrata_miR319b_stem-loop_246         62   7e-11
gma-MIR319g_MI0018672_Glycine_max_miR319g_stem-loop_198                58   1e-09
vun-MIR319b_MI0019567_Vigna_unguiculata_miR319b_stem-loop_223          58   1e-09
mtr-MIR4414b_MI0018316_Medicago_truncatula_miR4414b_stem-loop_107      56   4e-09
ptc-MIR319a_MI0002296_Populus_trichocarpa_miR319a_stem-loop_188        54   2e-08
rco-MIR319a_MI0013406_Ricinus_communis_miR319a_stem-loop_211           54   2e-08
gma-MIR319a_MI0001782_Glycine_max_miR319a_stem-loop_207                54   2e-08
ath-MIR319c_MI0001086_Arabidopsis_thaliana_miR319c_stem-loop_199       52   7e-08
ctr-MIR319_MI0013303_Citrus_trifoliata_miR319_stem-loop_186            52   7e-08
mdm-MIR319b_MI0023072_193                                              52   7e-08
pvu-MIR319c_MI0010705_Phaseolus_vulgaris_miR319c_stem-loop_734         50   3e-07
gma-MIR319c_MI0001789_Glycine_max_miR319c_stem-loop_221                50   3e-07
mtr-MIR319b_MI0005596_Medicago_truncatula_miR319b_stem-loop_180        50   3e-07
mdm-MIR319a_MI0023071_195                                              48   1e-06
tae-MIR319_MI0016453_Triticum_aestivum_miR319_stem-loop_211            48   1e-06
bdi-MIR319_MI0018137_Brachypodium_distachyon_miR319_stem-loop_280      48   1e-06
vvi-MIR319b_MI0006548_Vitis_vinifera_miR319b_stem-loop_194             46   4e-06
smo-MIR319_MI0006090_Selaginella_moellendorffii_miR319_stem-loop...    46   4e-06
ath-MIR319a_MI0000544_Arabidopsis_thaliana_miR319a_stem-loop_176       46   4e-06
ptc-MIR319b_MI0002297_Populus_trichocarpa_miR319b_stem-loop_185        46   4e-06
aly-MIR319a_MI0014518_Arabidopsis_lyrata_miR319a_stem-loop_221         46   4e-06
osa-MIR319b_MI0001099_Oryza_sativa_miR319b_stem-loop_197               44   2e-05
sbi-MIR319_MI0001573_Sorghum_bicolor_miR319_stem-loop_249              44   2e-05
aly-MIR319c_MI0014520_Arabidopsis_lyrata_miR319c_stem-loop_271         44   2e-05
zma-MIR319b_MI0001815_Zea_mays_miR319b_stem-loop_213                   44   2e-05
rco-MIR319b_MI0013407_Ricinus_communis_miR319b_stem-loop_179           44   2e-05
aqc-MIR319_MI0012091_Aquilegia_caerulea_miR319_stem-loop_177           44   2e-05
aly-MIR319d_MI0014633_Arabidopsis_lyrata_miR319d_stem-loop_267         44   2e-05
zma-MIR319a_MI0001813_Zea_mays_miR319a_stem-loop_209                   42   7e-05
ppt-MIR319d_MI0003499_Physcomitrella_patens_miR319d_stem-loop_170      42   7e-05
ppt-MIR319c_MI0003498_Physcomitrella_patens_miR319c_stem-loop_189      42   7e-05
sly-MIR319_MI0009978_Solanum_lycopersicum_miR319_stem-loop_168         42   7e-05
ppt-MIR319e_MI0005665_Physcomitrella_patens_miR319e_stem-loop_174      42   7e-05
vvi-MIR319g_MI0006551_Vitis_vinifera_miR319g_stem-loop_222             40   3e-04
ppt-MIR319b_MI0003497_Physcomitrella_patens_miR319b_stem-loop_160      40   3e-04
pta-MIR159c_MI0005780_Pinus_taeda_miR159c_stem-loop_85                 40   3e-04
zma-MIR319d_MI0001816_Zea_mays_miR319d_stem-loop_212                   40   3e-04
zma-MIR319c_MI0001814_Zea_mays_miR319c_stem-loop_216                   40   3e-04
sbi-MIR319b_MI0010886_Sorghum_bicolor_miR319b_stem-loop_179            40   3e-04
mdm-MIR319c_MI0023162_176                                              40   3e-04
ppt-MIR319a_MI0003496_Physcomitrella_patens_miR319a_stem-loop_169      40   3e-04

>vvi-MIR319f_MI0006550_Vitis_vinifera_miR319f_stem-loop_193
          Length = 193

 Score =  186 bits (94), Expect = 2e-48
 Identities = 158/178 (88%), Gaps = 1/178 (0%)
 Strand = Plus / Plus

                                                                       
Query: 22  gagctttcttcagtccactcatggaagggcaaagggtttgaattagctgccgactcattc 81
           |||||| |||||||||||||||||| |||  | ||||||| |||||||||||||||||||
Sbjct: 13  gagcttccttcagtccactcatggatgggttaggggtttggattagctgccgactcattc 72

                                                                       
Query: 82  attcaaactcagtagaaatggagtggatatttctactgtgaatgtgtgaatgatgcggga 141
           |||||||| ||||||||  | | ||||  || ||||||||||||||||||||||||||||
Sbjct: 73  attcaaacacagtagaatggaaatggagtttactactgtgaatgtgtgaatgatgcggga 132

                                                                     
Query: 142 gat-aacttcattcttttcttctctgtgcttggactgaagggagctcccttttactgt 198
           | | || ||||| |||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 133 ggtaaatttcatccttttcttgtctgtgcttggactgaagggagctcccttctactgt 190


>ptc-MIR319c_MI0002298_Populus_trichocarpa_miR319c_stem-loop_196
          Length = 196

 Score =  182 bits (92), Expect = 3e-47
 Identities = 160/179 (89%), Gaps = 9/179 (5%)
 Strand = Plus / Plus

                                                                       
Query: 22  gagctttcttcagtccactcatggaagggcaaagggtttgaattagctgccgactcattc 81
           ||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||
Sbjct: 13  gagctttcttcagtccactcatggacgggcgaagggtttggattagctgccgactcattc 72

                                                                       
Query: 82  attcaaactcagtagaaat----ggagtggatat---ttctactgtgaatgtgtgaatga 134
           |||||||| ||||||||||    ||||  | |||   | ||| |||||||||||||||||
Sbjct: 73  attcaaacacagtagaaattaagggagcag-tatggctgctattgtgaatgtgtgaatga 131

                                                                      
Query: 135 tgcgggagat-aacttcattcttttcttctctgtgcttggactgaagggagctcccttt 192
           |||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 132 tgcgggagataaatttcatccttttcttctctgtgcttggactgaagggagctcccttt 190


>ptc-MIR319d_MI0002299_Populus_trichocarpa_miR319d_stem-loop_193
          Length = 193

 Score =  176 bits (89), Expect = 2e-45
 Identities = 155/175 (88%), Gaps = 4/175 (2%)
 Strand = Plus / Plus

                                                                       
Query: 22  gagctttcttcagtccactcatggaagggcaaagggtttgaattagctgccgactcattc 81
           |||||| |||||||||||||||||| |||| ||||||||| |||||||||||||||||||
Sbjct: 13  gagcttccttcagtccactcatggacgggcgaagggtttggattagctgccgactcattc 72

                                                                       
Query: 82  attcaaactcagtagaaatggagtg---gatatttctactgtgaatgtgtgaatgatgcg 138
           |||||||| ||||||| | ||||||   |    | ||| ||||||||||||||||| |||
Sbjct: 73  attcaaacacagtagacaaggagtggcagcggctgctattgtgaatgtgtgaatgacgcg 132

                                                                  
Query: 139 ggaga-taacttcattcttttcttctctgtgcttggactgaagggagctcccttt 192
           ||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 133 ggagattaatttcatccttttcttctctgtgcttggactgaagggagctcccttt 187


>rco-MIR319c_MI0013408_Ricinus_communis_miR319c_stem-loop_188
          Length = 188

 Score =  135 bits (68), Expect = 6e-33
 Identities = 153/179 (85%), Gaps = 8/179 (4%)
 Strand = Plus / Plus

                                                                       
Query: 22  gagctttcttcagtccactcatggaagggcaaagggtttgaattagctgccgactcattc 81
           ||||| ||||||||||||||||||  |||| |||| ||||||||| ||||||||||||||
Sbjct: 7   gagctctcttcagtccactcatgggcgggcgaaggttttgaattatctgccgactcattc 66

                                                                       
Query: 82  attcaaactcagtagaaatgg----agtggatat---ttctactgtgaatgtgtgaatga 134
           |||||||| || |||||| ||    | |  | ||   | ||| |||||||||||||||||
Sbjct: 67  attcaaacacactagaaaagggagcattaaagatagctgctattgtgaatgtgtgaatga 126

                                                                      
Query: 135 tgcgggagataactt-cattcttttcttctctgtgcttggactgaagggagctcccttt 192
           |||||||||||| || ||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 127 tgcgggagataaatttcatacttctcttctctgtgcttggactgaagggagctcccttt 185


>gma-MIR319k_MI0018676_Glycine_max_miR319k_stem-loop_186
          Length = 186

 Score =  133 bits (67), Expect = 2e-32
 Identities = 153/178 (85%), Gaps = 4/178 (2%)
 Strand = Plus / Plus

                                                                       
Query: 22  gagctttcttcagtccactcatggaagggcaaagggtttgaattagctgccgactcattc 81
           |||||| |||||||||||||||||| ||| | |||||||||||||||||| |||||||||
Sbjct: 10  gagcttccttcagtccactcatggatgggtagagggtttgaattagctgctgactcattc 69

                                                                       
Query: 82  attcaaactcagtagaaatggagt--ggatatttctactgtgaatgtgtgaatgatgcgg 139
           |||||||| || ||||| | |  |   | || | ||| |||||||||||||||||||| |
Sbjct: 70  attcaaacacaatagaattagtatcatggta-tgctattgtgaatgtgtgaatgatgcag 128

                                                                     
Query: 140 gagat-aacttcattcttttcttctctgtgcttggactgaagggagctcccttttact 196
           ||| | || ||||| |||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 129 gaggtaaagttcatccttttcttgtctttgcttggactgaagggagctcccttttact 186


>gma-MIR319m_MI0018678_Glycine_max_miR319m_stem-loop_190
          Length = 190

 Score =  129 bits (65), Expect = 4e-31
 Identities = 154/180 (85%), Gaps = 4/180 (2%)
 Strand = Plus / Plus

                                                                       
Query: 22  gagctttcttcagtccactcatggaagggcaaagggtttgaattagctgccgactcattc 81
           |||||| |||||||||||||||||| ||  | |||||||||||||||||| |||||||||
Sbjct: 12  gagcttccttcagtccactcatggatggatagagggtttgaattagctgctgactcattc 71

                                                                       
Query: 82  attcaaactcagtagaaatggagtg--gatatttctactgtgaatgtgtgaatgatgcgg 139
           |||||||| || |||||  || ||   | |||  ||| ||||||||  |||||||||| |
Sbjct: 72  attcaaacacaatagaacgggtgtcatggtatg-ctattgtgaatgcctgaatgatgcag 130

                                                                       
Query: 140 gagataac-ttcattcttttcttctctgtgcttggactgaagggagctcccttttactgt 198
           ||| |||  ||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 131 gaggtaaagttcatccttttcttgtctgtgcttggactgaagggagctcccttttactgt 190


>gma-MIR319e_MI0017843_Glycine_max_miR319e_stem-loop_190
          Length = 190

 Score =  127 bits (64), Expect = 1e-30
 Identities = 153/179 (85%), Gaps = 4/179 (2%)
 Strand = Plus / Plus

                                                                       
Query: 15  ttgaagtgagctttcttcagtccactcatggaagggcaaagggtttgaattagctgccga 74
           |||||| |||||| |||||||||||||||||| ||| || ||||| ||||||||||| ||
Sbjct: 5   ttgaagagagcttccttcagtccactcatggatgggtaaggggttagaattagctgctga 64

                                                                       
Query: 75  ctcattcattcaaactcagtagaaatggagt--ggatatttctactgtgaatgtgtgaat 132
           ||||||||||||||| || ||||  |||  |   |||| | ||| |||||||||||||||
Sbjct: 65  ctcattcattcaaacacaatagatctggcatcatgata-tgctattgtgaatgtgtgaat 123

                                                                      
Query: 133 gatgcgggagat-aacttcattcttttcttctctgtgcttggactgaagggagctccct 190
           |||||||||| | || ||| | |||||| | ||||||||||||||||||||||||||||
Sbjct: 124 gatgcgggaggtaaatttcttccttttcctgtctgtgcttggactgaagggagctccct 182


>gma-MIR319h_MI0018673_Glycine_max_miR319h_stem-loop_186
          Length = 186

 Score =  119 bits (60), Expect = 4e-28
 Identities = 152/179 (84%), Gaps = 4/179 (2%)
 Strand = Plus / Plus

                                                                       
Query: 15  ttgaagtgagctttcttcagtccactcatggaagggcaaagggtttgaattagctgccga 74
           |||||| |||||| |||||||||||||||||| ||| || ||||||||||||||||| ||
Sbjct: 3   ttgaagagagcttccttcagtccactcatggatgggaaaggggtttgaattagctgctga 62

                                                                       
Query: 75  ctcattcattcaaactcagtagaaatggagt--ggatatttctactgtgaatgtgtgaat 132
           ||||||||||||||| || ||||   ||  |   ||||| | || |||||||||||||||
Sbjct: 63  ctcattcattcaaacacaatagattcggcttcatgatatgt-tattgtgaatgtgtgaat 121

                                                                      
Query: 133 gatgcgggagat-aacttcattcttttcttctctgtgcttggactgaagggagctccct 190
           |||||||||| | || ||| | |||||||| ||  ||||||||||||||||||||||||
Sbjct: 122 gatgcgggaggtaaatttcttccttttcttgtccttgcttggactgaagggagctccct 180


>mtr-MIR319_MI0001751_Medicago_truncatula_miR319_stem-loop_207
          Length = 207

 Score =  113 bits (57), Expect = 2e-26
 Identities = 153/180 (85%), Gaps = 5/180 (2%)
 Strand = Plus / Plus

                                                                       
Query: 16  tgaagtgagctttcttcagtccactcatggaagggcaaagggtttgaattagctgccgac 75
           ||||| |||||| |||||||||||||||||||||| || |||||||||||| |||| |||
Sbjct: 16  tgaagagagcttccttcagtccactcatggaagggtaaggggtttgaattacctgctgac 75

                                                                       
Query: 76  tcattcattcaaactcagtaga-aatggagtggatatttctactgtgaatgtgtgaatga 134
           ||||| |||||||| || |||| |||   | || || | ||| |||||||||||||||||
Sbjct: 76  tcattgattcaaacacaatagacaattatggggtta-tgctattgtgaatgtgtgaatga 134

                                                                       
Query: 135 tgcgggagat-aacttcattcttttcttctctgtgcttggactgaagggagctccctttt 193
           ||| |||| | || ||| | |||||||  ||| |||||||||||||||||||||||||||
Sbjct: 135 tgcaggaggtgaatttcttccttttct--tctttgcttggactgaagggagctccctttt 192


>aau-MIR319_MI0018982_Acacia_auriculiformis_miR319_stem-loop_197
          Length = 197

 Score =  105 bits (53), Expect = 5e-24
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                      
Query: 22 gagctttcttcagtccactcatggaagggcaaagggtttgaattagctgccgactcattc 81
          |||||| |||||||||||||||||||||| || ||||||||||||||||| |||||||||
Sbjct: 13 gagcttccttcagtccactcatggaagggtaaggggtttgaattagctgctgactcattc 72

                           
Query: 82 attcaaactcagtagaa 98
          |||||||| || |||||
Sbjct: 73 attcaaacacaatagaa 89


>amg-MIR319_MI0018986_Acacia_mangium_miR319_stem-loop_182
          Length = 182

 Score = 99.6 bits (50), Expect = 3e-22
 Identities = 72/78 (92%), Gaps = 1/78 (1%)
 Strand = Plus / Plus

                                                                      
Query: 22 gagctttcttcagtccactcatgga-agggcaaagggtttgaattagctgccgactcatt 80
          |||||| |||||||||||||||||| |||| |||||||||||||||||||| ||||||||
Sbjct: 4  gagcttccttcagtccactcatggatagggtaaagggtttgaattagctgctgactcatt 63

                            
Query: 81 cattcaaactcagtagaa 98
          ||||||||| || |||||
Sbjct: 64 cattcaaacacaatagaa 81


>ptc-MIR319f_MI0002301_Populus_trichocarpa_miR319f_stem-loop_202
          Length = 202

 Score = 91.7 bits (46), Expect = 8e-20
 Identities = 149/179 (83%), Gaps = 12/179 (6%)
 Strand = Plus / Plus

                                                                       
Query: 22  gagctttcttcagtccactcatgga-agggcaaagggtttgaattagctgccgactcatt 80
           |||||| |||||| ||||||||||| |||  |||||| ||||||||||||||||||||||
Sbjct: 14  gagcttccttcagcccactcatggataggagaaaggggttgaattagctgccgactcatt 73

                                                                       
Query: 81  cattcaaac-tcagtagaaa---tggagtggata-----tttctactgtgaatgtgtgaa 131
           ||||||| |  |||||||||    ||| ||||||     || ||||||||| ||||||||
Sbjct: 74  cattcaagcaccagtagaaaaaggggaatggatattcttttgctactgtgattgtgtgaa 133

                                                                      
Query: 132 tgatgcgggagataactt--cattcttttcttctctgtgcttggactgaagggagctcc 188
           ||||||||||||||| ||  ||| |  |  || ||||||||||||||||||||||||||
Sbjct: 134 tgatgcgggagataattttacatcccctctttttctgtgcttggactgaagggagctcc 192


>ptc-MIR319g_MI0002302_Populus_trichocarpa_miR319g_stem-loop_204
          Length = 204

 Score = 83.8 bits (42), Expect = 2e-17
 Identities = 69/77 (89%), Gaps = 2/77 (2%)
 Strand = Plus / Plus

                                                                       
Query: 114 ctactgtgaatgtgtgaatgatgcgggagataactt--cattcttttcttctctgtgctt 171
           ||||||||| ||||||||||||||||||||||| ||  ||| || | ||| |||||||||
Sbjct: 118 ctactgtgattgtgtgaatgatgcgggagataattttccatcctctccttttctgtgctt 177

                            
Query: 172 ggactgaagggagctcc 188
           |||||||||||||||||
Sbjct: 178 ggactgaagggagctcc 194



 Score = 61.9 bits (31), Expect = 7e-11
 Identities = 53/59 (89%), Gaps = 1/59 (1%)
 Strand = Plus / Plus

                                                                     
Query: 30 ttcagtccactcatgga-agggcaaagggtttgaattagctgccgactcattcattcaa 87
          ||||| |||||| |||| ||| ||||||| ||||| |||||||||||||||||||||||
Sbjct: 22 ttcagcccactcgtggataggacaaaggggttgaactagctgccgactcattcattcaa 80


>vvi-MIR319c_MI0006549_Vitis_vinifera_miR319c_stem-loop_182
          Length = 182

 Score = 67.9 bits (34), Expect = 1e-12
 Identities = 65/74 (87%), Gaps = 1/74 (1%)
 Strand = Plus / Plus

                                                                      
Query: 15 ttgaagtgagctttcttcagtccactcatggaagggcaaagggtttgaattagctgccga 74
          |||||| ||||||||||||||||||||||||   ||||   || ||||||||||||||||
Sbjct: 6  ttgaagagagctttcttcagtccactcatgg-gtggcagtaggattgaattagctgccga 64

                        
Query: 75 ctcattcattcaaa 88
          ||||||||| ||||
Sbjct: 65 ctcattcatccaaa 78



 Score = 56.0 bits (28), Expect = 4e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 164 ctgtgcttggactgaagggagctccctt 191
           ||||||||||||||||||||||||||||
Sbjct: 145 ctgtgcttggactgaagggagctccctt 172


>vun-MIR319a_MI0019574_Vigna_unguiculata_miR319a_stem-loop_207
          Length = 207

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                       
Query: 122 aatgtgtgaatgatgcgggagataacttcattcttttcttctctgtgcttggactgaagg 181
           |||| ||||||||||||||||| || || ||||||   ||  |||| |||||||||||||
Sbjct: 121 aatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaagg 180

                       
Query: 182 gagctccctttt 193
           ||||||||||||
Sbjct: 181 gagctccctttt 192



 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 18 aagtgagctttcttcagtccactcat 43
          ||||||||||||||||||||||||||
Sbjct: 17 aagtgagctttcttcagtccactcat 42



 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 62 aattagctgccgactcattcattcaaa 88
          |||||||||||||||||||||| ||||
Sbjct: 60 aattagctgccgactcattcatccaaa 86


>gma-MIR319b_MI0001783_Glycine_max_miR319b_stem-loop_208
          Length = 208

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                       
Query: 122 aatgtgtgaatgatgcgggagataacttcattcttttcttctctgtgcttggactgaagg 181
           |||| ||||||||||||||||| || || ||||||   ||  |||| |||||||||||||
Sbjct: 122 aatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaagg 181

                       
Query: 182 gagctccctttt 193
           ||||||||||||
Sbjct: 182 gagctccctttt 193



 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 62 aattagctgccgactcattcattcaaa 88
          |||||||||||||||||||||| ||||
Sbjct: 63 aattagctgccgactcattcatccaaa 89


>gma-MIR319j_MI0018675_Glycine_max_miR319j_stem-loop_179
          Length = 179

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                       
Query: 122 aatgtgtgaatgatgcgggagataacttcattcttttcttctctgtgcttggactgaagg 181
           |||| ||||||||| ||||||| || || | |||| | || ||||| |||||||||||||
Sbjct: 106 aatgagtgaatgatacgggagacaaattgaatcttatgttttctgtacttggactgaagg 165

                       
Query: 182 gagctccctttt 193
           ||||||||||||
Sbjct: 166 gagctccctttt 177



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 62 aattagctgccgactcattcat 83
          ||||||||||||||||||||||
Sbjct: 48 aattagctgccgactcattcat 69


>ath-MIR319b_MI0000545_Arabidopsis_thaliana_miR319b_stem-loop_172
          Length = 172

 Score = 61.9 bits (31), Expect = 7e-11
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                       
Query: 128 tgaatgatgcgggagataacttcattcttttcttctctgtgcttggactgaagggagctc 187
           ||||||||||| |||| || || | ||||  ||||||| |||||||||||||||||||||
Sbjct: 110 tgaatgatgcgagagacaaattgagtcttcacttctctatgcttggactgaagggagctc 169

              
Query: 188 cct 190
           |||
Sbjct: 170 cct 172



 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 22 gagctttcttcagtccactcatgga 46
          ||||||||||| |||||||||||||
Sbjct: 4  gagctttcttcggtccactcatgga 28


>aly-MIR319b_MI0014519_Arabidopsis_lyrata_miR319b_stem-loop_246
          Length = 246

 Score = 61.9 bits (31), Expect = 7e-11
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                       
Query: 128 tgaatgatgcgggagataacttcattcttttcttctctgtgcttggactgaagggagctc 187
           ||||||||||| |||| || || | ||||  ||||||| |||||||||||||||||||||
Sbjct: 149 tgaatgatgcgagagacaaattgagtcttcacttctctatgcttggactgaagggagctc 208

              
Query: 188 cct 190
           |||
Sbjct: 209 cct 211



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                        
Query: 17 gaagtgagctttcttcagtccactcatgga 46
          |||| ||||||||||| |||||||||||||
Sbjct: 38 gaagagagctttcttcggtccactcatgga 67


>gma-MIR319g_MI0018672_Glycine_max_miR319g_stem-loop_198
          Length = 198

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 160 ttctctgtgcttggactgaagggagctcc 188
           |||||||||||||||||||||||||||||
Sbjct: 154 ttctctgtgcttggactgaagggagctcc 182


>vun-MIR319b_MI0019567_Vigna_unguiculata_miR319b_stem-loop_223
          Length = 223

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 160 ttctctgtgcttggactgaagggagctcc 188
           |||||||||||||||||||||||||||||
Sbjct: 177 ttctctgtgcttggactgaagggagctcc 205


>mtr-MIR4414b_MI0018316_Medicago_truncatula_miR4414b_stem-loop_107
          Length = 107

 Score = 56.0 bits (28), Expect = 4e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                          
Query: 58 tttgaattagctgccgactcattcattcaaac 89
          |||||||||||||| |||||||||||||||||
Sbjct: 3  tttgaattagctgctgactcattcattcaaac 34



 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 118 tgtgaatgtgtgaatgatgcgggag 142
           |||||||||||||||||||||||||
Sbjct: 68  tgtgaatgtgtgaatgatgcgggag 92


>ptc-MIR319a_MI0002296_Populus_trichocarpa_miR319a_stem-loop_188
          Length = 188

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 58/67 (86%), Gaps = 1/67 (1%)
 Strand = Plus / Plus

                                                                      
Query: 22 gagctttcttcagtccactcatggaagggcaaagggtttgaattagctgccgactcattc 81
          ||||||||||||||||||||||||  ||    ||| ||| ||||||||||||||||||||
Sbjct: 13 gagctttcttcagtccactcatgggtggtagtaggattt-aattagctgccgactcattc 71

                 
Query: 82 attcaaa 88
          || ||||
Sbjct: 72 atccaaa 78



 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 164 ctgtgcttggactgaagggagctcccttt 192
           |||| ||||||||||||||||||||||||
Sbjct: 154 ctgtacttggactgaagggagctcccttt 182


>rco-MIR319a_MI0013406_Ricinus_communis_miR319a_stem-loop_211
          Length = 211

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 58/67 (86%), Gaps = 1/67 (1%)
 Strand = Plus / Plus

                                                                      
Query: 22 gagctttcttcagtccactcatggaagggcaaagggtttgaattagctgccgactcattc 81
          ||||||||||||||||||||||||  ||    ||| ||| ||||||||||||||||||||
Sbjct: 7  gagctttcttcagtccactcatgggtggcggtaggattt-aattagctgccgactcattc 65

                 
Query: 82 attcaaa 88
          || ||||
Sbjct: 66 atccaaa 72



 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 164 ctgtgcttggactgaagggagctcccttt 192
           |||| ||||||||||||||||||||||||
Sbjct: 180 ctgtacttggactgaagggagctcccttt 208


>gma-MIR319a_MI0001782_Glycine_max_miR319a_stem-loop_207
          Length = 207

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                       
Query: 127 gtgaatgatgcgggagataacttcattcttttcttctctgtgcttggactgaagggagct 186
           ||||||||||||||||| || || | ||||   ||  |||| ||||||||||||||||||
Sbjct: 126 gtgaatgatgcgggagacaaattgaatcttaagtttcctgtacttggactgaagggagct 185

                  
Query: 187 ccctttt 193
           |||||||
Sbjct: 186 ccctttt 192



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 22 gagctttcttcagtccactcatgg 45
          ||||||||||||||||||||||||
Sbjct: 23 gagctttcttcagtccactcatgg 46



 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 62 aattagctgccgactcattcattcaaa 88
          |||||||||||||||||||||| ||||
Sbjct: 62 aattagctgccgactcattcatccaaa 88


>ath-MIR319c_MI0001086_Arabidopsis_thaliana_miR319c_stem-loop_199
          Length = 199

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 59/70 (84%)
 Strand = Plus / Plus

                                                                       
Query: 119 gtgaatgtgtgaatgatgcgggagataacttcattcttttcttctctgtgcttggactga 178
           |||| ||||||||||||||||||||||  ||   || ||  || |||||| |||||||||
Sbjct: 119 gtgactgtgtgaatgatgcgggagatatttttgatccttctttatctgtgtttggactga 178

                     
Query: 179 agggagctcc 188
           ||||||||||
Sbjct: 179 agggagctcc 188


>ctr-MIR319_MI0013303_Citrus_trifoliata_miR319_stem-loop_186
          Length = 186

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 164 ctgtgcttggactgaagggagctccc 189
           ||||||||||||||||||||||||||
Sbjct: 151 ctgtgcttggactgaagggagctccc 176


>mdm-MIR319b_MI0023072_193
          Length = 193

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                        
Query: 16 tgaagtgagctttcttcagtccactcatgg 45
          ||||| ||||||||||||||||||||||||
Sbjct: 8  tgaagagagctttcttcagtccactcatgg 37



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 164 ctgtgcttggactgaagggagctccctt 191
           |||| |||||||||||||||||||||||
Sbjct: 153 ctgtacttggactgaagggagctccctt 180


>pvu-MIR319c_MI0010705_Phaseolus_vulgaris_miR319c_stem-loop_734
          Length = 734

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 160 ttctctgtgcttggactgaagggagctcc 188
           ||||||| |||||||||||||||||||||
Sbjct: 400 ttctctgagcttggactgaagggagctcc 428


>gma-MIR319c_MI0001789_Glycine_max_miR319c_stem-loop_221
          Length = 221

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 160 ttctctgtgcttggactgaagggagctcc 188
           |||||||||||||||||||| ||||||||
Sbjct: 173 ttctctgtgcttggactgaaaggagctcc 201


>mtr-MIR319b_MI0005596_Medicago_truncatula_miR319b_stem-loop_180
          Length = 180

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 169 cttggactgaagggagctccctttt 193
           |||||||||||||||||||||||||
Sbjct: 155 cttggactgaagggagctccctttt 179



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 22 gagctttcttcagtccactcatgg 45
          |||||||||| |||||||||||||
Sbjct: 6  gagctttctttagtccactcatgg 29


>mdm-MIR319a_MI0023071_195
          Length = 195

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 164 ctgtgcttggactgaagggagctccctt 191
           |||| |||||||||||||||||||||||
Sbjct: 155 ctgtacttggactgaagggagctccctt 182


>tae-MIR319_MI0016453_Triticum_aestivum_miR319_stem-loop_211
          Length = 211

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 167 tgcttggactgaagggagctccct 190
           ||||||||||||||||||||||||
Sbjct: 181 tgcttggactgaagggagctccct 204


>bdi-MIR319_MI0018137_Brachypodium_distachyon_miR319_stem-loop_280
          Length = 280

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 167 tgcttggactgaagggagctccct 190
           ||||||||||||||||||||||||
Sbjct: 223 tgcttggactgaagggagctccct 246


>vvi-MIR319b_MI0006548_Vitis_vinifera_miR319b_stem-loop_194
          Length = 194

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 169 cttggactgaagggagctccctt 191
           |||||||||||||||||||||||
Sbjct: 162 cttggactgaagggagctccctt 184


>smo-MIR319_MI0006090_Selaginella_moellendorffii_miR319_stem-
           loop_215
          Length = 215

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 169 cttggactgaagggagctccctt 191
           |||||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctccctt 207


>ath-MIR319a_MI0000544_Arabidopsis_thaliana_miR319a_stem-loop_176
          Length = 176

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 160 ttctctgtgcttggactgaagggagctccct 190
           |||||| || |||||||||||||||||||||
Sbjct: 144 ttctctttgattggactgaagggagctccct 174


>ptc-MIR319b_MI0002297_Populus_trichocarpa_miR319b_stem-loop_185
          Length = 185

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 170 ttggactgaagggagctcccttt 192
           |||||||||||||||||||||||
Sbjct: 157 ttggactgaagggagctcccttt 179


>aly-MIR319a_MI0014518_Arabidopsis_lyrata_miR319a_stem-loop_221
          Length = 221

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 160 ttctctgtgcttggactgaagggagctccct 190
           |||||| || |||||||||||||||||||||
Sbjct: 167 ttctctttgattggactgaagggagctccct 197


>osa-MIR319b_MI0001099_Oryza_sativa_miR319b_stem-loop_197
          Length = 197

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 61 gaattagctgccgactcattca 82
          ||||||||||||||||||||||
Sbjct: 52 gaattagctgccgactcattca 73



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 167 tgcttggactgaagggagctccct 190
           |||||||||||||||| |||||||
Sbjct: 165 tgcttggactgaagggtgctccct 188


>sbi-MIR319_MI0001573_Sorghum_bicolor_miR319_stem-loop_249
          Length = 249

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 61 gaattagctgccgactcattca 82
          ||||||||||||||||||||||
Sbjct: 74 gaattagctgccgactcattca 95



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 167 tgcttggactgaagggagctccct 190
           |||||||||||||||| |||||||
Sbjct: 188 tgcttggactgaagggtgctccct 211


>aly-MIR319c_MI0014520_Arabidopsis_lyrata_miR319c_stem-loop_271
          Length = 271

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 163 tctgtgcttggactgaagggagctcc 188
           |||||| |||||||||||||||||||
Sbjct: 197 tctgtgtttggactgaagggagctcc 222


>zma-MIR319b_MI0001815_Zea_mays_miR319b_stem-loop_213
          Length = 213

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 61 gaattagctgccgactcattca 82
          ||||||||||||||||||||||
Sbjct: 62 gaattagctgccgactcattca 83



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 167 tgcttggactgaagggagctccct 190
           |||||||||||||||| |||||||
Sbjct: 172 tgcttggactgaagggtgctccct 195


>rco-MIR319b_MI0013407_Ricinus_communis_miR319b_stem-loop_179
          Length = 179

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 169 cttggactgaagggagctccct 190
           ||||||||||||||||||||||
Sbjct: 153 cttggactgaagggagctccct 174


>aqc-MIR319_MI0012091_Aquilegia_caerulea_miR319_stem-loop_177
          Length = 177

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 169 cttggactgaagggagctccct 190
           ||||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctccct 175


>aly-MIR319d_MI0014633_Arabidopsis_lyrata_miR319d_stem-loop_267
          Length = 267

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 163 tctgtgcttggactgaagggagctcc 188
           |||||| |||||||||||||||||||
Sbjct: 197 tctgtgtttggactgaagggagctcc 222


>zma-MIR319a_MI0001813_Zea_mays_miR319a_stem-loop_209
          Length = 209

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 165 tgtgcttggactgaagggagctccctttt 193
           |||| ||||||||||||| ||||||||||
Sbjct: 166 tgtggttggactgaagggtgctccctttt 194



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 63 attagctgccgactcattcattca 86
          ||||||||||||||||| ||||||
Sbjct: 63 attagctgccgactcatccattca 86


>ppt-MIR319d_MI0003499_Physcomitrella_patens_miR319d_stem-loop_170
          Length = 170

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 169 cttggactgaagggagctccc 189
           |||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctccc 165


>ppt-MIR319c_MI0003498_Physcomitrella_patens_miR319c_stem-loop_189
          Length = 189

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 169 cttggactgaagggagctccc 189
           |||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctccc 174


>sly-MIR319_MI0009978_Solanum_lycopersicum_miR319_stem-loop_168
          Length = 168

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 164 ctgtgcttggactgaagggagctcc 188
           |||| ||||||||||||||||||||
Sbjct: 144 ctgtacttggactgaagggagctcc 168


>ppt-MIR319e_MI0005665_Physcomitrella_patens_miR319e_stem-loop_174
          Length = 174

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 169 cttggactgaagggagctccc 189
           |||||||||||||||||||||
Sbjct: 147 cttggactgaagggagctccc 167


>vvi-MIR319g_MI0006551_Vitis_vinifera_miR319g_stem-loop_222
          Length = 222

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 170 ttggactgaagggagctccc 189
           ||||||||||||||||||||
Sbjct: 192 ttggactgaagggagctccc 211


>ppt-MIR319b_MI0003497_Physcomitrella_patens_miR319b_stem-loop_160
          Length = 160

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 cttggactgaagggagctcc 188
           ||||||||||||||||||||
Sbjct: 140 cttggactgaagggagctcc 159


>pta-MIR159c_MI0005780_Pinus_taeda_miR159c_stem-loop_85
          Length = 85

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 123 atgtgtgaatgatgcgggag 142
           ||||||||||||||||||||
Sbjct: 2   atgtgtgaatgatgcgggag 21


>zma-MIR319d_MI0001816_Zea_mays_miR319d_stem-loop_212
          Length = 212

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 63 attagctgccgactcattca 82
          ||||||||||||||||||||
Sbjct: 63 attagctgccgactcattca 82



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 167 tgcttggactgaagggagctccct 190
           |||||||||||||||| |||||||
Sbjct: 171 tgcttggactgaagggtgctccct 194


>zma-MIR319c_MI0001814_Zea_mays_miR319c_stem-loop_216
          Length = 216

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 63 attagctgccgactcattcattca 86
          ||||||||||||||||| ||||||
Sbjct: 63 attagctgccgactcatccattca 86


>sbi-MIR319b_MI0010886_Sorghum_bicolor_miR319b_stem-loop_179
          Length = 179

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 63 attagctgccgactcattcattca 86
          ||||||||||||||||| ||||||
Sbjct: 43 attagctgccgactcatccattca 66


>mdm-MIR319c_MI0023162_176
          Length = 176

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 cttggactgaagggagctcc 188
           ||||||||||||||||||||
Sbjct: 156 cttggactgaagggagctcc 175


>ppt-MIR319a_MI0003496_Physcomitrella_patens_miR319a_stem-loop_169
          Length = 169

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 cttggactgaagggagctcc 188
           ||||||||||||||||||||
Sbjct: 148 cttggactgaagggagctcc 167


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.