ERISdb: a Database of Plant Splice Sites

Select a species and type of splice site

OR, alternatively, select a gene name

atgc highly conserved terminal intronic nucleotides at 5' or 3' end.

atgc branch site.



#1
gene: LOC_Os05g28980, transcript: LOC_Os05g28980.1
Orthologs: AT1G02750  AT3G06760  AT5G49230  AT3G05700  AT5G26990  AT4G02200  GLYMA20G38290  GLYMA19G40150  GLYMA15G15560  GLYMA10G29030  GLYMA09G04490  GLYMA03G37530  GRMZM5G840013  
AGCATGGAAGTTACTTTAAGatatccttttttcttctctataatgctggcaatgaacatatgcaatttta ... attggtacttgggaaaacaactgcacatggctttccttaatgaataatacATGCAACGCAGGCGAAGAGT



#2
gene: LOC_Os05g28980, transcript: LOC_Os05g28980.2
Orthologs: AT1G02750  AT3G06760  AT5G49230  AT3G05700  AT5G26990  AT4G02200  GLYMA20G38290  GLYMA19G40150  GLYMA15G15560  GLYMA10G29030  GLYMA09G04490  GLYMA03G37530  GRMZM5G840013  
AGCATGGAAGTTACTTTAAGatatccttttttcttctctataatgctggcaatgaacatatgcaatttta ... attggtacttgggaaaacaactgcacatggctttccttaatgaataatacATGCAACGCAGGCGAAGAGT



#3
gene: LOC_Os05g28980, transcript: LOC_Os05g28980.4
Orthologs: AT1G02750  AT3G06760  AT5G49230  AT3G05700  AT5G26990  AT4G02200  GLYMA20G38290  GLYMA19G40150  GLYMA15G15560  GLYMA10G29030  GLYMA09G04490  GLYMA03G37530  GRMZM5G840013  
AGCATGGAAGTTACTTTAAGatatccttttttcttctctataatgctggcaatgaacatatgcaatttta ... attggtacttgggaaaacaactgcacatggctttccttaatgaataatacATGCAACGCAGGCGAAGAGT



#4
gene: LOC_Os05g28980, transcript: LOC_Os05g28980.5
Orthologs: AT1G02750  AT3G06760  AT5G49230  AT3G05700  AT5G26990  AT4G02200  GLYMA20G38290  GLYMA19G40150  GLYMA15G15560  GLYMA10G29030  GLYMA09G04490  GLYMA03G37530  GRMZM5G840013  
AGCATGGAAGTTACTTTAAGatatccttttttcttctctataatgctggcaatgaacatatgcaatttta ... attggtacttgggaaaacaactgcacatggctttccttaatgaataatacATGCAACGCAGGCGAAGAGT