ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GRMZM2G151993, transcript: GRMZM2G151993_T01
Orthologs: AT5G63060 GLYMA05G02420 LOC_Os02g21630
CCAAGCTCACCAAGGCGATTgtatcctctaattcactcgcttgtagcagtgaagctcacacctaatagct ... ccgagttcatatagcactgctatcttcagttttcctttcaactgcattagAAATGGCGTCAGGACTTTGG

#2
gene: GRMZM2G151993, transcript: GRMZM2G151993_T02
Orthologs: AT5G63060 GLYMA05G02420 LOC_Os02g21630
CCAAGCTCACCAAGGCGATTgtatcctctaattcactcgcttgtagcagtgaagctcacacctaatagct ... ccgagttcatatagcactgctatcttcagttttcctttcaactgcattagAAATGGCGTCAGGACTTTGG

#3
gene: GRMZM2G151993, transcript: GRMZM2G151993_T03
Orthologs: AT5G63060 GLYMA05G02420 LOC_Os02g21630
CCAAGCTCACCAAGGCGATTgtatcctctaattcactcgcttgtagcagtgaagctcacacctaatagct ... ccgagttcatatagcactgctatcttcagttttcctttcaactgcattagAAATGGCGTCAGGACTTTGG

#4
gene: GRMZM2G151993, transcript: GRMZM2G151993_T06
Orthologs: AT5G63060 GLYMA05G02420 LOC_Os02g21630
CCAAGCTCACCAAGGCGATTgtatcctctaattcactcgcttgtagcagtgaagctcacacctaatagct ... ccgagttcatatagcactgctatcttcagttttcctttcaactgcattagAAATGGCGTCAGGACTTTGG