ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GRMZM2G049422, transcript: GRMZM2G049422_T01
Orthologs: AT1G32400  GLYMA17G16370  GLYMA11G04450  GLYMA05G06080  GLYMA01G40890  LOC_Os08g18044  PP1S64_81V6  PP1S54_193V6  PP1S197_11V6  SELMODRAFT_172827  Vv02s0012g00560  
ACACCTGCTGTTTGTGTTTCgtatcctttttaatgtgcctcttagacatcattctgttgtcctctctaaa ... ataagatcacactattaattcatgcttgtttcctttgacttataaaaaagTATGCCTTCTTGGTCATATT



#2
gene: GRMZM2G049422, transcript: GRMZM2G049422_T02
Orthologs: AT1G32400  GLYMA17G16370  GLYMA11G04450  GLYMA05G06080  GLYMA01G40890  LOC_Os08g18044  PP1S64_81V6  PP1S54_193V6  PP1S197_11V6  SELMODRAFT_172827  Vv02s0012g00560  
ACACCTGCTGTTTGTGTTTCgtatcctttttaatgtgcctcttagacatcattctgttgtcctctctaaa ... ataagatcacactattaattcatgcttgtttcctttgacttataaaaaagTATGCCTTCTTGGTCATATT