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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaactcctcgctcccggccggcccccgcgtcggggttttccatttactactactcgctgctccctcctgctccgtgctcagactcagatccgaccaaagcggtttcgctgactaaattctccttcgtttttttttctttttctggacggattcctggacgcagGCAAGATCAAGATCGGAATCAACG

Basic information

species Zea mays
transcript GRMZM2G180625_T02
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G180625_T02 (Zea mays), 3'ss of exon 1
lower sequence: LOC_Os08g03290.3 (Oryza sativa), 3'ss of exon 1
gtaactcctcgctcccggccggcccccgcgtcggggttttccatttactactactcgctgctccctcctgctccgtgctcagactcagatccgaccaaagcggtttcgctgactaaattctccttcgttttttt--ttctttttctggacggattcctgg--acgcagGCAAGATCAAGATCGGAATCAACG
                           |       | |  ||    | | | | |   | | |||   || |   ||||    ||  |   || ||     | | |   |||     || |   |  |||||||  |   ||||||||  |  ||  |||  ||||||||||||| ||||||||||||||||
---------------------------gtaattatgctcacctccgaat-cgaattaattcccccgtttgattactgctggtgcttcg---cgtcc----tgatctgattgatgtttttttttctgatttttttggtgaattttctggtggtgtttttggggacgcagGCAAGATTAAGATCGGAATCAACG
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211053535|gb|FL025550.1|FL025550
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211053536|gb|FL025551.1|FL025551
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|22542005|gb|BU092443.1|BU092443
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|32909831|gb|CF014643.1|CF014643
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211487211|gb|FL025419.1|FL025419
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|50337671|gb|CO532797.1|CO532797
EST:     TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211495874|gb|FL025465.1|FL025465
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211050580|gb|FL025536.1|FL025536
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211484337|gb|FL025412.1|FL025412
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211498763|gb|FL025479.1|FL025479
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211490093|gb|FL025432.1|FL025432
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211041695|gb|FL025492.1|FL025492
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|31353173|gb|CD437530.1|CD437530
EST:     TCCCCTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|15177408|gb|BI398347.1|BI398347
EST:     CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211044662|gb|FL025507.1|FL025507
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|31363460|gb|CD447817.1|CD447817
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|31351344|gb|CD435701.1|CD435701
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211053538|gb|FL025553.1|FL025553
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211044664|gb|FL025509.1|FL025509
EST:     TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211495867|gb|FL025458.1|FL025458
EST:     TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|32910442|gb|CF015254.1|CF015254
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211056482|gb|FL025566.1|FL025566
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|22472422|gb|BU036902.1|BU036902
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211044668|gb|FL025513.1|FL025513
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|6021920|gb|AW066848.1|AW066848
EST:     TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|15632311|gb|BI679404.1|BI679404
EST:     GTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: GTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211498766|gb|FL025482.1|FL025482
EST:     TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|32866526|gb|CF006208.1|CF006208
EST:     CCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGGCCATGGG                         GCAAGATCAAGATCGGAATCAACG
genomic: CCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCA-GCCAT-GGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211041703|gb|FL025500.1|FL025500
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211487209|gb|FL025417.1|FL025417
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211056483|gb|FL025567.1|FL025567
EST:     TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|33100578|gb|CF060538.1|CF060538
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|31361482|gb|CD445839.1|CD445839
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|32919789|gb|CF024601.1|CF024601
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211041691|gb|FL025488.1|FL025488
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211490092|gb|FL025431.1|FL025431
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211041692|gb|FL025489.1|FL025489
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAAGG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|15215059|gb|BI431148.1|BI431148
EST:     CGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: CGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|32844906|gb|CD984587.1|CD984587
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|21389986|gb|BQ528035.1|BQ528035
EST:     TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|31351720|gb|CD436077.1|CD436077
EST:     GTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCCCTAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: GTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCG--CC-AGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211053540|gb|FL025555.1|FL025555
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211044669|gb|FL025514.1|FL025514
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211495879|gb|FL025470.1|FL025470
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|148959378|gb|EC905425.2|EC905425
EST:     TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211050576|gb|FL025532.1|FL025532
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211056481|gb|FL025565.1|FL025565
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GSAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211490091|gb|FL025430.1|FL025430
EST:     TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211484339|gb|FL025414.1|FL025414
EST:     TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211490104|gb|FL025443.1|FL025443
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211492978|gb|FL025444.1|FL025444
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211498769|gb|FL025485.1|FL025485
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|19057720|gb|BM736387.1|BM736387
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211041697|gb|FL025494.1|FL025494
EST:     TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAKNCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|40336739|gb|CK370809.1|CK370809
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211047630|gb|FL025525.1|FL025525
EST:     TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCANNCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|31349375|gb|CD433732.1|CD433732
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211041699|gb|FL025496.1|FL025496
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211498761|gb|FL025477.1|FL025477
EST:     TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211495876|gb|FL025467.1|FL025467
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211492984|gb|FL025450.1|FL025450
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|20300372|gb|BQ163315.1|BQ163315
EST:     TCGTCTCGTCTCTGCTCCTCACCTCGCCGTCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCGTCTCGTCTCCGCTCCTCACCTCG-C--CAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211056479|gb|FL025563.1|FL025563
EST:     GTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCGTGG                         GCAAGATCAAGATCGGAATCAACG
genomic: GTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211044657|gb|FL025502.1|FL025502
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|31354376|gb|CD438733.1|CD438733
EST:     -CCTTTTATCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: CCCGTCT-CCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211495869|gb|FL025460.1|FL025460
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|116829373|gb|EC867018.1|EC867018
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|9732872|gb|BE511624.1|BE511624
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211487217|gb|FL025425.1|FL025425
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211047624|gb|FL025519.1|FL025519
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211047626|gb|FL025521.1|FL025521
EST:     TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211495877|gb|FL025468.1|FL025468
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211044666|gb|FL025511.1|FL025511
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211044656|gb|FL025501.1|FL025501
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211495872|gb|FL025463.1|FL025463
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211047632|gb|FL025527.1|FL025527
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211047633|gb|FL025528.1|FL025528
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|149037210|gb|EE155296.2|EE155296
EST:     TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|32867998|gb|CF007680.1|CF007680
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|31350171|gb|CD434528.1|CD434528
EST:     TCCCGTCTCTGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211495870|gb|FL025461.1|FL025461
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|149078623|gb|EE167408.2|EE167408
EST:     TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211050578|gb|FL025534.1|FL025534
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211490100|gb|FL025439.1|FL025439
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211487207|gb|FL025415.1|FL025415
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211487212|gb|FL025420.1|FL025420
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|148949868|gb|EC895363.2|EC895363
EST:     TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211047621|gb|FL025516.1|FL025516
EST:     TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAKCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211041694|gb|FL025491.1|FL025491
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|120480713|gb|EH210974.1|EH210974
EST:     TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|20811247|gb|BQ295725.1|BQ295725
EST:     CTCCTCACCTCG-CAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: CTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|31355626|gb|CD439983.1|CD439983
EST:     TCTCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211044667|gb|FL025512.1|FL025512
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211050581|gb|FL025537.1|FL025537
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|5555607|gb|AI881558.1|AI881558
EST:     CTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: CTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211044665|gb|FL025510.1|FL025510
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|149074611|gb|EE163016.2|EE163016
EST:     TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|15177420|gb|BI398359.1|BI398359
EST:     CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211490099|gb|FL025438.1|FL025438
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|84980904|gb|DW531253.1|DW531253
EST:     CGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: CGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|28987281|gb|CB351553.1|CB351553
EST:     TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211047631|gb|FL025526.1|FL025526
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|31355488|gb|CD439845.1|CD439845
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCATTCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211492988|gb|FL025454.1|FL025454
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|14202746|gb|BG836423.1|BG836423
EST:     CGCCA-CCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211487219|gb|FL025427.1|FL025427
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|29130458|gb|CB381162.1|CB381162
EST:     TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAG-CATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|32919252|gb|CF024064.1|CF024064
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGGG                         GCAAGATCAAGATCGGAATCGACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCAT-GGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|67025133|gb|CO453882.1|CO453882
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|22715474|gb|BU197784.1|BU197784
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|32861366|gb|CF001048.1|CF001048
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211053541|gb|FL025556.1|FL025556
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|31361586|gb|CD445943.1|CD445943
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211047623|gb|FL025518.1|FL025518
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|33102657|gb|CF062617.1|CF062617
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|32851206|gb|CD990887.1|CD990887
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211495873|gb|FL025464.1|FL025464
EST:     TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211053534|gb|FL025549.1|FL025549
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211041700|gb|FL025497.1|FL025497
EST:     TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211041689|gb|FL025486.1|FL025486
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211498768|gb|FL025484.1|FL025484
EST:     TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|6536564|gb|AW224877.1|AW224877
EST:     GCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: GCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|213178253|gb|FM193325.1|FM193325
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|67041651|gb|CO467906.1|CO467906
EST:     CTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: CTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|32919468|gb|CF024280.1|CF024280
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCAT-GGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211056480|gb|FL025564.1|FL025564
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|15053555|gb|BI359100.1|BI359100
EST:     GCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: GCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211056475|gb|FL025559.1|FL025559
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211490098|gb|FL025437.1|FL025437
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGYNAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCC---AGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211047629|gb|FL025524.1|FL025524
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|22819583|gb|BU499673.1|BU499673
EST:     GTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: GTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|33100685|gb|CF060645.1|CF060645
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211041701|gb|FL025498.1|FL025498
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|28569012|gb|CB280887.1|CB280887
EST:     TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|13125949|gb|BG316624.1|BG316624
EST:     TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGA
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGA
EST: gi|71595823|gb|DR906574.1|DR906574
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211050585|gb|FL025541.1|FL025541
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|149074774|gb|EE163205.2|EE163205
EST:     TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211492979|gb|FL025445.1|FL025445
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211492981|gb|FL025447.1|FL025447
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|26456011|gb|CA827594.1|CA827594
EST:     CCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: CCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|15053556|gb|BI359101.1|BI359101
EST:     CCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: CCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211490103|gb|FL025442.1|FL025442
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211495868|gb|FL025459.1|FL025459
EST:     TCCCGTCTCCGTCGTCTCGTCTCTGCTCCTCACCTCGCCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCT---CGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG
EST: gi|211041698|gb|FL025495.1|FL025495
EST:     T-CTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGG                         GCAAGATCAAGATCGGAATCAACG
genomic: TCCTCCCGTCTCCGTCGTCTCGTCTCCGCTCCTCACCTCGCCAGCCATGGgtaactcctc ... ctggacgcagGCAAGATCAAGATCGGAATCAACG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tgactaaattctccttcgtttttttttctttttctggacggattcctggacgcagGCAAGATCAAGATCGGAATCAACG
 gactaaa  putative branch site (score: 2)
                                          ttcct  putative PPT
                  tttttttttctttttc  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtaactcctcgctcccggccggcccccgcgtcggggttttccatttactactactcgctgctccctcctgctccgtgctcagactcagatccgaccaaagcggtttcgctgactaaattctccttcgtttttttttctttttctggacggattcctggacgcagGCAAGATCAAGATCGGAATCAACG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGATCA