1 5' 3' | 2 5' 3' |
...acactgttcatcattcgaacgacctaccctagcattagactcatgaaattcacgtcaattgattccagaacatgtctaatccaaagtttgtcgactgtagGCTCATCTATCGACTTTTGAGGGGTTGAGGGCTGACGGTTTTCCCAGCAGCAGCTTAAATGAAGTGTGGCAAACTTCCGCCCAGACGTGGTCTACTCCCC
species | Physcomitrella patens |
transcript | PP1S9_408V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CCTCCGCCTCCTCCTCACGCGCGACCATCTTCAAAGTCTCGCCTTCCGCT GCTCATCTATCGACTTTTGAGGGGTTGAGGGCTGACGGTTTTCCCAGCAGCEST: gi|67570949|gb|BJ943773.1|BJ943773
genomic: CCTCCGCCTCCTCCTCACGCGCGACCATCTTCAAAGTCTCGCCTTCCGCTgtgcgtctgc ... tcgactgtagGCTCATCTATCGACTTTTGAGGGGTTGAGGGCTGACGGTTTTCCCAGCAGC
EST: CCTCCGCCTCCTCCTCACGCGCGACCATCTTCAAAGTCTCGCCTTCCGCT GCTCATCTATCGACTTTTGAGGGGTTGAGGGCTGACGGTTTTCCCAGCAGCEST: gi|162212018|gb|FC388128.1|FC388128
genomic: CCTCCGCCTCCTCCTCACGCGCGACCATCTTCAAAGTCTCGCCTTCCGCTgtgcgtctgc ... tcgactgtagGCTCATCTATCGACTTTTGAGGGGTTGAGGGCTGACGGTTTTCCCAGCAGC
EST: CCTCCGCCTCCTCCTCACGCGCGACCATCTTCAAAGTCTCGCCTTCCGCT GCTCATCTATCGACTTTTGAGGGGTTGAGGGCTGACGGTTTTCCCAGCAGC
genomic: CCTCCGCCTCCTCCTCACGCGCGACCATCTTCAAAGTCTCGCCTTCCGCTgtgcgtctgc ... tcgactgtagGCTCATCTATCGACTTTTGAGGGGTTGAGGGCTGACGGTTTTCCCAGCAGC
aaattcacgtcaattgattccagaacatgtctaatccaaagtttgtcgactgtagGCTCATCTATCGACTTTTGAGGGGTTGAGGGCTGACGGTTTTCCCAGCAGCAGCTTAAATGAAGTGTGGCAAACTTCCGCCCAGACGTGGTCTACTCCCC
gtctaat putative branch site (score: 7)
aattgatt TA-rich tract