1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtatgtggatccttgttgtggataaacttcctaattgcttgagaatttcccagtaaagaagctttggtcctattttgtaagcacataagatcagatagattctatgccctgatgttccagcaacgaacgtttgaacgcagGATACCATCGCAAATCAAGTCGCTGATATGTACATGTGGCCGAAGTCTTTAGAAATCCCAATAAATACTGATGCCAG
species | Physcomitrella patens |
transcript | PP1S9_391V6.1 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: TGTTGGGCGGAGATATTATGGCAATTCCTGGACTTTACGGTTTCGTTAAA GATACCATCGCANATCAAGTCGCTGATATGTACATGTGGCCGAAGTCTTTAEST: gi|162274567|gb|FC451010.1|FC451010
genomic: TGTTGGGCGGAGATATTATGGCAATTCCTGGACTTTACGGTTTCGTTAAAgtatgtggat ... ttgaacgcagGATACCATCGCAAATCAAGTCGCTGATATGTACATGTGGCCGAAGTCTTTA
EST: TGTTGGGCGGAGATATTATGGCAATTCCTGGACTTTACGGTTTCGTTAAA GATACCATCGCAAATCAAGTCGCTGATATGTACATGTGGCCGAAGTCTTTAEST: gi|100364726|gb|BY947877.1|BY947877
genomic: TGTTGGGCGGAGATATTATGGCAATTCCTGGACTTTACGGTTTCGTTAAAgtatgtggat ... ttgaacgcagGATACCATCGCAAATCAAGTCGCTGATATGTACATGTGGCCGAAGTCTTTA
EST: TGTTGGGCGGAGATATTATGGCAATTCCTGGACTTTACGGTTTCGTTAAN GATACCATCGCAAATCANGTCGCTGATATGTACATGTGGGCGAAGTCTTTA
genomic: TGTTGGGCGGAGATATTATGGCAATTCCTGGACTTTACGGTTTCGTTAAAgtatgtggat ... ttgaacgcagGATACCATCGCAAATCAAGTCGCTGATATGTACATGTGGCCGAAGTCTTTA
taagatcagatagattctatgccctgatgttccagcaacgaacgtttgaacgcagGATACCATCGCAAATCAAGTCGCTGATATGTACATGTGGCCGAAGTCTTTAGAAATCCCAATAAATACTGATGCCAG
ccctgat putative branch site (score: 6)
atagatt TA-rich tract