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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGAAGCCGTGCAAATGGAGTATGATCCTTCTCAGGTCTCTTACAAGCAGCTCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatccgccaactactctctgctaaaaatctaaccttgtttccttcggttaagaatgtgtgaaacgcgactctgaatttctttctattacccagct...

Basic information

species Physcomitrella patens
transcript PP1S95_65V6.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|37830083|gb|BJ588095.1|BJ588095
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162218763|gb|FC394313.1|FC394313
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162231960|gb|FC409034.1|FC409034
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162207784|gb|FC383869.1|FC383869
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162202427|gb|FC378694.1|FC378694
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162242208|gb|FC418434.1|FC418434
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|22132758|gb|BQ827333.1|BQ827333
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|67578541|gb|BJ950708.1|BJ950708
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162273938|gb|FC450077.1|FC450077
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|18361655|gb|BJ193721.1|BJ193721
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|18358196|gb|BJ190255.1|BJ190255
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162270802|gb|FC446831.1|FC446831
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|67700156|gb|BJ960389.1|BJ960389
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|15327165|gb|BI487689.1|BI487689
EST:     GTCTTCTGAAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: GTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162242975|gb|FC417615.1|FC417615
EST:     CGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: CGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162211155|gb|FC387179.1|FC387179
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162220885|gb|FC395862.1|FC395862
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|18350759|gb|BJ182810.1|BJ182810
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162263086|gb|FC439349.1|FC439349
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|7047340|gb|AW477234.1|AW477234
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162250688|gb|FC426537.1|FC426537
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162279751|gb|FC455659.1|FC455659
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|37832362|gb|BJ590374.1|BJ590374
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|67577759|gb|BJ949926.1|BJ949926
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162250687|gb|FC426536.1|FC426536
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|67573608|gb|BJ946432.1|BJ946432
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162155690|gb|FC331303.1|FC331303
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|18348482|gb|BJ180531.1|BJ180531
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|67571154|gb|BJ943978.1|BJ943978
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162204692|gb|FC382024.1|FC382024
EST:     GATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: GATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162277308|gb|FC453114.1|FC453114
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|22492685|gb|BU052608.1|BU052608
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|18375057|gb|BJ206635.1|BJ206635
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGA
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGA
EST: gi|37837565|gb|BJ595573.1|BJ595573
EST:     TGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162260367|gb|FC435019.1|FC435019
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162254357|gb|FC430492.1|FC430492
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162275916|gb|FC451984.1|FC451984
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162260366|gb|FC435018.1|FC435018
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162228445|gb|FC404420.1|FC404420
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|67579339|gb|BJ951470.1|BJ951470
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162214593|gb|FC390624.1|FC390624
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162202426|gb|FC378693.1|FC378693
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162280048|gb|FC456442.1|FC456442
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|67572583|gb|BJ945407.1|BJ945407
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|67693363|gb|BJ953596.1|BJ953596
EST:     GGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: GGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162228446|gb|FC404421.1|FC404421
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|37827780|gb|BJ585792.1|BJ585792
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGA
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGT-AACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGA
EST: gi|162270803|gb|FC446832.1|FC446832
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|15320016|gb|BI487390.1|BI487390
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162209500|gb|FC386133.1|FC386133
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162218738|gb|FC394288.1|FC394288
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|67694470|gb|BJ954703.1|BJ954703
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|6102367|gb|AW126837.1|AW126837
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|100389468|gb|BY988946.1|BY988946
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|37839349|gb|BJ597357.1|BJ597357
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|18355416|gb|BJ187475.1|BJ187475
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|19789453|gb|BQ041317.1|BQ041317
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|67507798|gb|BJ940675.1|BJ940675
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|67579326|gb|BJ951457.1|BJ951457
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|7067178|gb|AW497033.1|AW497033
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|67573139|gb|BJ945963.1|BJ945963
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|67508019|gb|BJ940893.1|BJ940893
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|37832896|gb|BJ590908.1|BJ590908
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGA
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGG-TAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGA
EST: gi|19789404|gb|BQ041289.1|BQ041289
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162199661|gb|FC375900.1|FC375900
EST:     AGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: AGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|18374332|gb|BJ205910.1|BJ205910
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162273939|gb|FC450078.1|FC450078
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162231961|gb|FC409035.1|FC409035
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162211883|gb|FC387755.1|FC387755
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162203389|gb|FC378810.1|FC378810
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162265082|gb|FC440961.1|FC440961
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|7047308|gb|AW477202.1|AW477202
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162186949|gb|FC363355.1|FC363355
EST:     AAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: AAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|67701442|gb|BJ961675.1|BJ961675
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162207783|gb|FC383868.1|FC383868
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|18348404|gb|BJ180452.1|BJ180452
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162222915|gb|FC399377.1|FC399377
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|37827699|gb|BJ585711.1|BJ585711
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162218739|gb|FC394289.1|FC394289
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|67696993|gb|BJ957226.1|BJ957226
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162155691|gb|FC331304.1|FC331304
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162277309|gb|FC453115.1|FC453115
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|67576623|gb|BJ949447.1|BJ949447
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162276941|gb|FC453039.1|FC453039
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|37844898|gb|BJ602906.1|BJ602906
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGA
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGG-TAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGA
EST: gi|67695957|gb|BJ956190.1|BJ956190
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|15730014|gb|BI741615.1|BI741615
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTATGATCACGGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|67508271|gb|BJ941140.1|BJ941140
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|100448341|gb|CJ972640.1|CJ972640
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|15320069|gb|BI487594.1|BI487594
EST:     CCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: CCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|37826406|gb|BJ584418.1|BJ584418
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|67579073|gb|BJ951224.1|BJ951224
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|37849111|gb|BJ607119.1|BJ607119
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162203327|gb|FC379593.1|FC379593
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|18355952|gb|BJ188011.1|BJ188011
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|18368293|gb|BJ200378.1|BJ200378
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162277479|gb|FC453006.1|FC453006
EST:     GGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: GGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162242209|gb|FC418435.1|FC418435
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|67507858|gb|BJ940734.1|BJ940734
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162215346|gb|FC391114.1|FC391114
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162280049|gb|FC456443.1|FC456443
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162277480|gb|FC453007.1|FC453007
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162203328|gb|FC379594.1|FC379594
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162220886|gb|FC395863.1|FC395863
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|67508009|gb|BJ940883.1|BJ940883
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162265464|gb|FC440790.1|FC440790
EST:     AGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: AGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162214594|gb|FC390625.1|FC390625
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162254356|gb|FC430491.1|FC430491
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|208383043|gb|DC915315.1|DC915315
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|15728306|gb|BI740721.1|BI740721
EST:     CATGATCCCACTCAGAAGAACCGCCAG                         GGTTACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: CATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|67570098|gb|BJ942922.1|BJ942922
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162277288|gb|FC453718.1|FC453718
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162218764|gb|FC394314.1|FC394314
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|100353789|gb|BY983312.1|BY983312
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|6227444|gb|AW156043.1|AW156043
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|67698985|gb|BJ959218.1|BJ959218
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|67569937|gb|BJ942761.1|BJ942761
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|67575512|gb|BJ948336.1|BJ948336
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|162277287|gb|FC453717.1|FC453717
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
EST: gi|37827700|gb|BJ585712.1|BJ585712
EST:     TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAG                         GGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG
genomic: TCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seq library.


Block sizes: 35 (upstream exon), 35 (downstream exon)
Score: 90

GGAAGCCGTGCAAATGGAGTATGATCCTTCTCAGGTCTCTTACAAGCAGCTCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatcc ... ttgtgcgcagGGTAACGACGTAGGATCACAGTACCGCTCGGGAATCTATTATCACACGGAGGAGCAGAAAGTGGAGGCAATTGCCTCAATGAAGGAGGAAGAAGCTCGGT





























Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GGAAGCCGTGCAAATGGAGTATGATCCTTCTCAGGTCTCTTACAAGCAGCTCCTCGATGTCTTCTGGAAGAAACATGATCCCACTCAGAAGAACCGCCAGgttcgtatccgccaactactctctgctaaaaatctaaccttgtttccttcggttaagaatgtgtgaaacgcgactctgaatttctttctattacccagct

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC