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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaaacgttctgttcctccgattggggtctctcccccaaacccggcaagagaatatttttatggcgtgtcggttgttgtctcagagtggttggtcgaaagtttgcggtgggttttgagtttcggtggtcttgttggtcatgtttttggtgaaatttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGACGTCTGCAGCGGGAAGACTGGGCATGTGGAAGCCGTGCAAATGGAGTATG

Basic information

species Physcomitrella patens
transcript PP1S95_65V6.1
intron # 1
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|37830083|gb|BJ588095.1|BJ588095
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCNTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162218763|gb|FC394313.1|FC394313
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162231960|gb|FC409034.1|FC409034
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162207784|gb|FC383869.1|FC383869
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162202427|gb|FC378694.1|FC378694
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162242208|gb|FC418434.1|FC418434
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|67578541|gb|BJ950708.1|BJ950708
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162273938|gb|FC450077.1|FC450077
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|18361655|gb|BJ193721.1|BJ193721
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|18358196|gb|BJ190255.1|BJ190255
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162270802|gb|FC446831.1|FC446831
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|67700156|gb|BJ960389.1|BJ960389
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162211155|gb|FC387179.1|FC387179
EST:     GGAGCGTGGAATAGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162220885|gb|FC395862.1|FC395862
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|18350759|gb|BJ182810.1|BJ182810
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162263086|gb|FC439349.1|FC439349
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162250688|gb|FC426537.1|FC426537
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162279751|gb|FC455659.1|FC455659
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|37832362|gb|BJ590374.1|BJ590374
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|67577759|gb|BJ949926.1|BJ949926
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162250687|gb|FC426536.1|FC426536
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|67573608|gb|BJ946432.1|BJ946432
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|18348482|gb|BJ180531.1|BJ180531
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCAGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|67571154|gb|BJ943978.1|BJ943978
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162277308|gb|FC453114.1|FC453114
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|22492685|gb|BU052608.1|BU052608
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|18375057|gb|BJ206635.1|BJ206635
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162260367|gb|FC435019.1|FC435019
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162254357|gb|FC430492.1|FC430492
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162275916|gb|FC451984.1|FC451984
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162260366|gb|FC435018.1|FC435018
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162228445|gb|FC404420.1|FC404420
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162214593|gb|FC390624.1|FC390624
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162202426|gb|FC378693.1|FC378693
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162280048|gb|FC456442.1|FC456442
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|67572583|gb|BJ945407.1|BJ945407
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162228446|gb|FC404421.1|FC404421
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|37827780|gb|BJ585792.1|BJ585792
EST:     CAGCGCGTTCCTGGTGTTACCAAG                         ACATCAGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: CAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162270803|gb|FC446832.1|FC446832
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162218738|gb|FC394288.1|FC394288
EST:     TTTCTGGAGCGTGGAATGGGCGTTTCAGCGCGTTCCTGGTG-TACCCAAG                         ACATCGGTNGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGA
genomic: TTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTA-CCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGA
EST: gi|67694470|gb|BJ954703.1|BJ954703
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|100389468|gb|BY988946.1|BY988946
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|37839349|gb|BJ597357.1|BJ597357
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|18355416|gb|BJ187475.1|BJ187475
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|19789453|gb|BQ041317.1|BQ041317
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|67507798|gb|BJ940675.1|BJ940675
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|67573139|gb|BJ945963.1|BJ945963
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|67508019|gb|BJ940893.1|BJ940893
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|37832896|gb|BJ590908.1|BJ590908
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|19789404|gb|BQ041289.1|BQ041289
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|18374332|gb|BJ205910.1|BJ205910
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162273939|gb|FC450078.1|FC450078
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162231961|gb|FC409035.1|FC409035
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162211883|gb|FC387755.1|FC387755
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162203389|gb|FC378810.1|FC378810
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162265082|gb|FC440961.1|FC440961
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|67701442|gb|BJ961675.1|BJ961675
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162207783|gb|FC383868.1|FC383868
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|18348404|gb|BJ180452.1|BJ180452
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCAGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162222915|gb|FC399377.1|FC399377
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|37827699|gb|BJ585711.1|BJ585711
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162218739|gb|FC394289.1|FC394289
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|67696993|gb|BJ957226.1|BJ957226
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162155691|gb|FC331304.1|FC331304
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162277309|gb|FC453115.1|FC453115
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|67576623|gb|BJ949447.1|BJ949447
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162276941|gb|FC453039.1|FC453039
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|37844898|gb|BJ602906.1|BJ602906
EST:     GTTTNTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|67695957|gb|BJ956190.1|BJ956190
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|67508271|gb|BJ941140.1|BJ941140
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|100448341|gb|CJ972640.1|CJ972640
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162209501|gb|FC386134.1|FC386134
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|37826406|gb|BJ584418.1|BJ584418
EST:     TTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: TTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162203327|gb|FC379593.1|FC379593
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|18355952|gb|BJ188011.1|BJ188011
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|18368293|gb|BJ200378.1|BJ200378
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162242209|gb|FC418435.1|FC418435
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|67507858|gb|BJ940734.1|BJ940734
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162215346|gb|FC391114.1|FC391114
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162280049|gb|FC456443.1|FC456443
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162277480|gb|FC453007.1|FC453007
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162203328|gb|FC379594.1|FC379594
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162220886|gb|FC395863.1|FC395863
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|67508009|gb|BJ940883.1|BJ940883
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|18347233|gb|BJ179279.1|BJ179279
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162214594|gb|FC390625.1|FC390625
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162254356|gb|FC430491.1|FC430491
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|208383043|gb|DC915315.1|DC915315
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|67570098|gb|BJ942922.1|BJ942922
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162277288|gb|FC453718.1|FC453718
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162218764|gb|FC394314.1|FC394314
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|100353789|gb|BY983312.1|BY983312
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|6227444|gb|AW156043.1|AW156043
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|67698985|gb|BJ959218.1|BJ959218
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|67569937|gb|BJ942761.1|BJ942761
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|67575512|gb|BJ948336.1|BJ948336
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|162277287|gb|FC453717.1|FC453717
EST:     GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
EST: gi|37827700|gb|BJ585712.1|BJ585712
EST:     GTGGAATNGGCGTTTCAGCGCGTTCCTGGTGTTACCAAG                         ACATCAGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC
genomic: GTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGAC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seq library.


Block sizes: 35 (upstream exon), 35 (downstream exon)
Score: 61

CTCCGATATTGGATCCGAGATGGCGCAACTGGCGACTTTTGCTGCTGGATGTTTCTGGAGCGTGGAATTGGCGTTTCAGCGCGTTCCTGGTGTTACCAAGgtaaacgttc ... tttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGACGTCTGCAGCGGGAAGACTGGGCATGTGGAAGCCGTGCAAATGGAGTATG































 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gggttttgagtttcggtggtcttgttggtcatgtttttggtgaaatttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGACGTCTGCAGCGGGAAGACTGGGCATGTGGAAGCCGTGCAAATGGAGTATG
                              atgttttt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtaaacgttctgttcctccgattggggtctctcccccaaacccggcaagagaatatttttatggcgtgtcggttgttgtctcagagtggttggtcgaaagtttgcggtgggttttgagtttcggtggtcttgttggtcatgtttttggtgaaatttgtggcagACATCGGTTGGTTACACTCAGGGGAAAACGGAGAATCCTACATACAGGGACGTCTGCAGCGGGAAGACTGGGCATGTGGAAGCCGTGCAAATGGAGTATG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGGAAG