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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...gctatcgttggcttaaaatgaagacattttttagggtccaaggtcaccacaggtttatgtcttaggttgactcactttgagcctcttggatcttctacagAAGAAGAGTGGTGTGTAA

Basic information

species Physcomitrella patens
transcript PP1S100_219V6.1
intron # 3
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

accacaggtttatgtcttaggttgactcactttgagcctcttggatcttctacagAAGAAGAGTGGTGTGTAA
                       gactcac  putative branch site (score: 2)
                                             tcttctac  putative PPT
        tttatgt  TA-rich tract