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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgcttgcactcgctttggtacaccttataatcggtaactggctgcaaaattttggaatattttgtgctatgaattgctatattcgttaaacagtctacttgatgtggcttcagGTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAACTGGAATATCTACCATTGATGTCATGAACTCTATTGCTCGAGGTCAAAA

Basic information

species Physcomitrella patens
transcript PP1S100_117V6.1
intron # 6
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S100_117V6.1 (Physcomitrella patens), 3'ss of exon 6
lower sequence: LOC_Os06g37180.1 (Oryza sativa), 3'ss of exon 6
--gtgcttgcactcgcttt-ggtacacc-ttat---aatcggtaactggctgcaaaattttggaatattttgtgctatgaattg--ctatattcgt------------taaacagtctactt-gatgtg-gcttcagGTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAACTGGAATATCTACCATTGATGTCATGAACTCTATTGCTCGAGGTCAAAA
    | ||   |||  ||  ||| |||   |||   |||   ||  |   ||||   | ||  |  | |  |     ||  |     ||||||  |            | || | | |  |  |||||    | ||||   |||||| || || |||||  | || || || || |||||||| ||||| || ||||| |||||||||||||||||||| ||||||||||| |||||
gtaagtttttgctcaattcaggtgcactgctatggaaattcatagttaagtgcatgttcttttatcagtacggatggtggctaaacttatatttctcttctgataatattaataatgtcttccgatgtttattccagGAAGTTCAATTAATCCCAGTGAAAGAACCTATCCAGAAGAGATGATCCAAACAGGGATATCAACCATTGATGTCATGAACTCCATTGCTCGAGGCCAAAA

upper sequence: PP1S100_117V6.1 (Physcomitrella patens), 3'ss of exon 6
lower sequence: LOC_Os01g51380.2 (Oryza sativa), 3'ss of exon 6
gtgcttgcactcgctttggtacaccttataatcggtaactggctgcaaaattttggaatattttgtgctatgaattgctatattcgttaaacagtctacttgatgtggcttcagGTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAACTGGAATATCTACCATTGATGTCATGAACTCTATTGCTCGAGGTCAAAA
               | ||| |    |    | | | | |      || ||||  || |||  |||      |||   || |||     | | |  |   || ||      ||||   ||| ||||| || ||||| || ||||||||||| || |||||||| ||||| |||||||| |||||||| ||||| |||||||| || ||||| ||
--------------gtaggtgctagctgcttttgattatt---cataagattt--gattatggtgtaaatcaaatgcttagattttgacatcgggtttgctggtg------cagGAAGTTCTATCAATCCCAGTGAACGAACATACCCTGAAGAAATGATTCAGACTGGGATATCTACAATTGATGTTATGAATTCTATTGCCCGTGGTCAGAA

upper sequence: PP1S100_117V6.1 (Physcomitrella patens), 3'ss of exon 6
lower sequence: GRMZM2G181151_T02 (Zea mays), 3'ss of exon 6
------------------------------gtgct-tgcactcgctttggtacaccttataatcggtaactggctgcaaaattttggaatattttgtgctat-gaattgctatat---tcgttaaa-----cagtc---tact-tgatgtggcttcagGTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAACTGGAATATCTACCATTGATGTCATGAACTCTATTGCTCGAGGTCAAAA
                               | |  ||| |  | |   || ||  || |     |||   || |  | || | | || |  || | |  ||  |||   |   |   || |||||      | ||   |||| |||| | | | ||||   ||| || || || |||||| | || || || ||||||||||| |||||||| ||||| ||||||||||| |||||||| |||||||| || |||||
gtaagtaatttctggttcaagcacgctgctctacaatgctcatggtgaagtgcatgttgtggagagtagtaggttttagaagtattgattgattagcggcattaaatcaatgagtccatctttaaagtttgtaatcatgtactctgattttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAACTGGGATATCCACCATTGATGTGATGAACTCCATTGCTCGTGGGCAAAA

upper sequence: PP1S100_117V6.1 (Physcomitrella patens), 3'ss of exon 6
lower sequence: GRMZM2G094497_T02 (Zea mays), 3'ss of exon 5
------------------------------gtgct-tgcactcgctttggtacaccttataatcggtaactggctgcaaa-attttggaatattttgt----gctatga----attgctatattcgttaaacagtctacttgatgtggcttcagGTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAACTGGAATATCTACCATTGATGTCATGAACTCTATTGCTCGAGGTCAAAA
                               | |  | | |  | ||  || ||   | |  |    |   || |  | |  | ||||   |||  ||     | ||||    ||   || |||   |||| |       |||| | ||| ||||   ||| || ||||| |||||| | || || || ||||||||||| |||||||| ||||| ||||||||||||||||| || |||||||| || |||||
gtaagtaatttctggttctagcatgctgctctacaatactcatggttaagtgcatgctgtcgtgcagagtaggttttagacgtattggttaattgagttaaatcaatgagtccatctttaaattttgtaaatatgtactctgattttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAACTGGGATATCCACCATTGATGTCATGAATTCCATTGCTCGTGGACAAAA

upper sequence: PP1S100_117V6.1 (Physcomitrella patens), 3'ss of exon 6
lower sequence: GLYMA10G42940.2 (Glycine max), 3'ss of exon 6
gtgcttgcactcgctttggtacaccttataatcggtaactggctgcaaaattttggaatattttgtgct-atgaattgctatattcgttaaacagtctacttgatgtggcttcagGTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAACTGGAATATCTACCATTGATGTCATGAACTCTATTGCTCGAGGTCAAAA
                               |   |||||  ||    | | ||  |  ||| | || | |||  |   | | | |     |   ||| |   || ||   |||||   ||| ||||| ||||||||||| || ||||||||||||||||| || |||||||||||||| |||||||||||||| ||||||||| ||||||||||
------------------------------gtatttaacttcctttgcagtgttctacaattgtatgttgatgtgtgaatttttaccccctaatatcttcccaatatg---tcagGAAGTTCCATCAATCCTAGTGAGCGAACCTACCCTGAGGAGATGATACAGACTGGAATATCTACAATTGATGTCATGAATTCTATTGCTAGAGGTCAAAA

upper sequence: PP1S100_117V6.1 (Physcomitrella patens), 3'ss of exon 6
lower sequence: GLYMA09G38110.2 (Glycine max), 3'ss of exon 6
gtgcttgcactcgctttggtacaccttataatcggtaactggctgcaaaattt----tggaatattttgtgctatgaattgctatattcg--ttaaacagtctacttgatgtggcttcagGTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAACTGGAATATCTACCATTGATGTCATGAACTCTATTGCTCGAGGTCAAAA
                                           |  |||||||    |||     | ||   |||| ||   ||| || |  ||    | | ||       |   ||||||   ||| ||||||||||||||| | || || |||||||||||||| || || || ||||||||||||||||||||||| ||||||||| ||||||||||
------------------------------------------gtataaaatttcttctggggaggtatgaa-tatgtatgtttatctttgccttttttaatatatcccccataa-ttcagGAAGTTCCATCAACCCTAGTGAGAGAACCTATCCTGAGGAGATGATACAGACAGGGATATCTACCATTGATGTCATGAATTCTATTGCTAGAGGTCAAAA

upper sequence: PP1S100_117V6.1 (Physcomitrella patens), 3'ss of exon 6
lower sequence: GLYMA18G48280.1 (Glycine max), 3'ss of exon 6
gtgcttgcactcgctttggtacaccttataatcggtaactggctgcaaaattttggaatattttgtgctatgaattgctatattcgttaaacagtctacttgatgtggcttcagGTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAACTGGAATATCTACCATTGATGTCATGAACTCTATTGCTCGAGGTCAAAA-
                          ||||||   |      |||   |  | || |||||    || | |   ||||     |  ||||| | | | | ||   |    |||||   ||| ||||||||||||||| | || || || ||||||||||| || || |||||||||||||||||||||||||| ||||||||| |||||||||| 
------------------------tatataatttctt-----ctggggaggtctg-aatatgc-atgtttttctttgcc----tttttaaatattttccctgtaat----tcaggAAGTTCCATCAACCCTAGTGAGAGAACCTATCCAGAGGAGATGATACAGACAGGAATATCTACCATTGATGTCATGAATTCTATTGCTAGAGGTCAAAAG

upper sequence: PP1S100_117V6.1 (Physcomitrella patens), 3'ss of exon 6
lower sequence: GLYMA20G24070.1 (Glycine max), 3'ss of exon 7
gtgcttgcactcgctttggtacaccttataatcggtaactggctgcaaaattttggaatattttgtgctatgaattgctatattcgttaaacagtctacttgatgtggcttcagGTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAACTGGAATATCTACCATTGATGTCATGAACTCTATTGCTCGAGGTCAAAA
                            || |    |      ||||   || |  |||  | |||   |||  |   | | |||     |   ||| |   || |   ||||||   ||| ||||| ||||||||| | || || |||||||||||||| || || ||||||||||| |||||||||||||| ||||||||| ||||||||||
---------------------------gtatttaa-attcctttgcagtgttctacaattgtatgt-tgatgtgtgagttttttccccctaatatcttcccaatat---ttcagGAAGTTCCATCAATCCTAGTGAGAGAACCTATCCTGAGGAGATGATACAGACAGGAATATCTACAATTGATGTCATGAATTCTATTGCTAGAGGTCAAAA

upper sequence: PP1S100_117V6.1 (Physcomitrella patens), 3'ss of exon 6
lower sequence: AT1G20260.1 (Arabidopsis thaliana), 3'ss of exon 6
gtgcttgcactcgctttggtacaccttataatcggtaactggctgcaaaattttggaatattttgtgctatgaattgctatattcgttaaacagtct-acttgatg-tggcttcagGTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAACTGGAATATCTACCATTGATGTCATGAACTCTATTGCTCGAGGTCAAAA
                            | | |  | |||| || |||     | | |   |       | |||    | | ||  |||||  || |   | |||  |   |  |||   |||||||||||| |||||  | || |||||||| |||||||| ||||| || || ||||||||||||||||||||||| |||||||| || || ||
---------------------------gtgagcattgactgcct-caagtcaattgtactctgaagagaaggaaaaaatctgtt--ttaaattgtttcggtcgataatttttatagGAAGTTCAATCAACCCCAGTGAAAGAACCTACCCTGAAGAGATGATACAAACGGGGATTTCTACCATTGATGTCATGAACTCCATTGCTCGTGGACAGAA

upper sequence: PP1S100_117V6.1 (Physcomitrella patens), 3'ss of exon 6
lower sequence: AT4G38510.5 (Arabidopsis thaliana), 3'ss of exon 7
gtgcttgcactcgctttggtacaccttataatcggtaactggctgcaaaattttggaatattttgtgctatgaattgctatattcgttaaacagtctacttga----tgtggcttcagGTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAACTGGAATATCTACCATTGATGTCATGAACTCTATTGCTCGAGGTCAAAA
                                  || |   |||  |   | |||  | ||  | | ||||    |  || |      | | |   | || ||    |||  || ||||   ||| ||||| || |||||| | || || ||||| ||||||||||| || || ||||| ||||||||||||||||||||||| ||  |||| || ||
----------------------------------gtgagctgctttagcctcttgtcacataat-tactatctcataataaaacacacagatataattctagacttttgtttctccagGAAGTTCTATCAATCCCAGTGAGAGAACCTATCCTGAAGAGATGATTCAGACGGGTATATCCACCATTGATGTCATGAACTCTATCGCCAGAGGACAGAA

upper sequence: PP1S100_117V6.1 (Physcomitrella patens), 3'ss of exon 6
lower sequence: AT1G76030.1 (Arabidopsis thaliana), 3'ss of exon 6
gtgcttgcactcgctttggtacaccttataatcggtaactggctgcaaaatt------ttggaatattttgtgctatgaattgctatattcgttaaacagtctacttgatgtggcttcagGTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAACTGGAATATCTACCATTGATGTCATGAACTCTATTGCTCGAGGTCAAAA
                               |  | ||||    | | ||||      |||  || | |   || |||  |   | | ||| | |||  ||| | |   | |      |||   |||||||||||| |||||  | || || ||||| |||||||| || || || ||||| ||||| ||||||||||| || |||||||| || || ||
------------------------------gtgagcaactaagaggacaattattccattgagatctctgaagcaatgtttcatt-tgttcttaaaaatgtcaattccttatattgatagGAAGTTCAATCAACCCCAGTGAAAGAACCTATCCTGAAGAGATGATACAGACAGGCATATCGACCATCGATGTCATGAATTCCATTGCTCGTGGACAGAA

upper sequence: PP1S100_117V6.1 (Physcomitrella patens), 3'ss of exon 6
lower sequence: Vv18s0001g01020.t01 (Vitis vinifera), 3'ss of exon 6
gtgcttgcactcgctttggtacaccttataatcggtaactggctgcaaaattttggaatattttgtgctatgaattgctatattcgttaaacagtctacttgatgtggcttcagGTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAACTGGAATATCTACCATTGATGTCATGAACTCTATTGCTCGAGGTCAAAA
       || |     | | | |  | || ||   | ||     || |        || ||||| || |||      ||  ||   | | | | ||| | |  | |  | | |||   ||| |||||||| |||||| | || || ||||| |||||||| ||||| || || ||||| ||||||||||||||||| |||||||||||||||||
-----gtcagtaatgctagga-agataatgatttattaccaaaagctaggg---aaaagattttatgttat------ctggatatataataaactcttccttgtctttcat-agGAAGTTCTATCAACCCCAGTGAGAGAACCTATCCTGAAGAGATGATACAAACAGGGATTTCTACTATTGATGTCATGAACTCCATTGCTCGAGGTCAAAA

upper sequence: PP1S100_117V6.1 (Physcomitrella patens), 3'ss of exon 6
lower sequence: Vv03s0038g02760.t01 (Vitis vinifera), 3'ss of exon 6
gtgcttgcactcgctt-tggtacaccttataatcggtaactggctgcaaaattttggaatattttgtgctatgaattgctatattcgttaaacagtctacttgatgtggcttcagGTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAACTGGAATATCTACCATTGATGTCATGAACTCTATTGCTCGAGGTCAAAA
|||  |    | |    |||||    |||        ||||  |  |  || ||| || | |       |   |  | || || || ||      | | |||        ||||||   ||| ||||| ||||||||| | ||||| ||||| |||||||| || || || || ||||| |||||||||||||| ||||||||  |||| || ||
gtgagttttttaggaggtggtattatttaaccattaaaactcacctctgaactttagagtttacaacagtggcagatcctgtactcttt---ttctttccttt------tttcagGGAGTTCCATCAATCCTAGTGAGAGAACATATCCTGAAGAGATGATCCAGACAGGGATTTCTACAATTGATGTCATGAATTCTATTGCCAGAGGACAGAA

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|162269043|gb|FC445535.1|FC445535
EST:     TATTGACAACGGTCCTCCCATTTTAGCAGAAGCGTATCTTGATATTTCAG                         GTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAA
genomic: TATTGACAACGGTCCTCCCATTTTAGCAGAAGCGTATCTTGATATTTCAGgtgcttgcac ... gtggcttcagGTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAA
EST: gi|100397347|gb|BY972453.1|BY972453
EST:     TACTGACAACGGTCCTCCCATTTTAGCAGAAGCGTATCTTGATATTTCAG                         GTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAA
genomic: TATTGACAACGGTCCTCCCATTTTAGCAGAAGCGTATCTTGATATTTCAGgtgcttgcac ... gtggcttcagGTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAA
EST: gi|162221566|gb|FC397583.1|FC397583
EST:     TATTGACAACGGTCCTCCCATTTTAGCAGAAGCGTATCTTGATATTTCAG                         GTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAA
genomic: TATTGACAACGGTCCTCCCATTTTAGCAGAAGCGTATCTTGATATTTCAGgtgcttgcac ... gtggcttcagGTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAA
EST: gi|100392297|gb|BY953293.1|BY953293
EST:     TATTGACAACGGTCCTCCCATTTTAGCAGAAGCGTATCTTGATATTTCAG                         GTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAA
genomic: TATTGACAACGGTCCTCCCATTTTAGCAGAAGCGTATCTTGATATTTCAGgtgcttgcac ... gtggcttcagGTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAA
EST: gi|100441292|gb|BY962581.1|BY962581
EST:     TATTGACAACGGTCCTCCCATTTTAGCAGAAGCGTATCTTGATATTTCAG                         GTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAA
genomic: TATTGACAACGGTCCTCCCATTTTAGCAGAAGCGTATCTTGATATTTCAGgtgcttgcac ... gtggcttcagGTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAA
EST: gi|100360601|gb|BY984200.1|BY984200
EST:     TATTGACAACGGTCCTCCCATTTTAGCAGAAGCGTATCTTGATATTTCAG                         GTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAA
genomic: TATTGACAACGGTCCTCCCATTTTAGCAGAAGCGTATCTTGATATTTCAGgtgcttgcac ... gtggcttcagGTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAA
EST: gi|67574817|gb|BJ947641.1|BJ947641
EST:     TATTGACAACGGTCCTCCCATTTTAGCAGAAGCGTATCTTGATATTTCAG                         GTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAA
genomic: TATTGACAACGGTCCTCCCATTTTAGCAGAAGCGTATCTTGATATTTCAGgtgcttgcac ... gtggcttcagGTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAA
EST: gi|162278567|gb|FC454029.1|FC454029
EST:     TATTGACAACGGTCCTCCCATTTTAGCAGAAGCGTATCTTGATATTTCAG                         GTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAA
genomic: TATTGACAACGGTCCTCCCATTTTAGCAGAAGCGTATCTTGATATTTCAGgtgcttgcac ... gtggcttcagGTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAA
EST: gi|208357262|gb|DC910659.1|DC910659
EST:     TATTGACAACGGTCCTCCCATTTTAGCAGAAGCGTATCTTGATATTTCAG                         GTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAA
genomic: TATTGACAACGGTCCTCCCATTTTAGCAGAAGCGTATCTTGATATTTCAGgtgcttgcac ... gtggcttcagGTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAA
EST: gi|100432786|gb|BY978739.1|BY978739
EST:     TATTGACAACGGTCCTCCCATTTTAGCAGAAGCGTATCTTGATATTTCAG                         GTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAA
genomic: TATTGACAACGGTCCTCCCATTTTAGCAGAAGCGTATCTTGATATTTCAGgtgcttgcac ... gtggcttcagGTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAA
EST: gi|18348999|gb|BJ181048.1|BJ181048
EST:     TATTGACAACGGTCCTCCCATTTTAGCAGAAGCGTATCTTGATATTTCAG                         GTGCTTCAATCAACCCTAG
genomic: TATTGACAACGGTCCTCCCATTTTAGCAGAAGCGTATCTTGATATTTCAGgtgcttgcac ... gtggcttcagGTGCTTCAATCAACCCTAG
EST: gi|100425066|gb|BY976955.1|BY976955
EST:     TATTGACAACGGTCCTCCCATTTTAGCAGAAGCGTATCTTGATATTTCAG                         GTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAA
genomic: TATTGACAACGGTCCTCCCATTTTAGCAGAAGCGTATCTTGATATTTCAGgtgcttgcac ... gtggcttcagGTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAA
EST: gi|100437022|gb|BY979644.1|BY979644
EST:     TATTGACAACGGTCCTCCCATTTTAGCAGAAGCGTATCTTGATATTTCAG                         GTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAA
genomic: TATTGACAACGGTCCTCCCATTTTAGCAGAAGCGTATCTTGATATTTCAGgtgcttgcac ... gtggcttcagGTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAA
EST: gi|18357729|gb|BJ189788.1|BJ189788
EST:     TATTGACAACGGTCCTCCCATTTTAGCAGAAGCGTATCTTGATATTTCAN                         GTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAA
genomic: TATTGACAACGGTCCTCCCATTTTAGCAGAAGCGTATCTTGATATTTCAGgtgcttgcac ... gtggcttcagGTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAA
EST: gi|18342277|gb|BJ174312.1|BJ174312
EST:     TATTGACAACGGTCCTCCCATTTTAGCAGAAGCGTATCTTGATATTTCAG                         GTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAA
genomic: TATTGACAACGGTCCTCCCATTTTAGCAGAAGCGTATCTTGATATTTCAGgtgcttgcac ... gtggcttcagGTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

attttgtgctatgaattgctatattcgttaaacagtctacttgatgtggcttcagGTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAACTGGAATATCTACCATTGATGTCATGAACTCTATTGCTCGAGGTCAAAA
                                      acttgat  putative branch site (score: 5)
         tatgaatt  TA-rich tract