1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' |
TGCATATGCCAAGCTCTGCTCAATGATTGGTCCTTCAATTTATGGTCATTCTGATGTCAAGAAAGCTATTGCATGCTTGTTATTTGGGGGGTCTAAGAAGgtatgcattcttatcaagcccctatatgttttgtagaaaaaaatgctcctccatttgccctaattatgtccttattcttcgaactactctcactgcag
species | Zea mays |
transcript | GRMZM2G450055_T01 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: CTGATGTCAAGAAAGCTATTGCATGCTTGTTATTTGGGGGGTCTAAGAAG AGGCTACCTGATGGTGTEST: gi|211539705|gb|FK958373.1|FK958373
genomic: CTGATGTCAAGAAAGCTATTGCATGCTTGTTATTTGGGGGGTCTAAGAAGgtatgcattc ... ctcactgcagAGGCTACCTGATGGTGT
EST: CTGATGTCAAGAAAGCTATTGCATGCTTGTTATTTGGGGGGTCTAAGAAG AGGCTACCTGATGGTGTACGTTTGAGAGGGGACATTCATGTCTTGCTTCTGEST: gi|211542714|gb|FK958381.1|FK958381
genomic: CTGATGTCAAGAAAGCTATTGCATGCTTGTTATTTGGGGGGTCTAAGAAGgtatgcattc ... ctcactgcagAGGCTACCTGATGGTGTACGTTTGAGAGGGGACATTCATGTCTTGCTTCTG
EST: CTGATGTCAAGAAAGCTATTGCATGCTTGTTATTTGGGGGGTCTAAGAAG AGGCTACCTGATGGTGTACGTTTGAGAGGGGACATTCATGTCTTGCTTCTGEST: gi|211542711|gb|FK958378.1|FK958378
genomic: CTGATGTCAAGAAAGCTATTGCATGCTTGTTATTTGGGGGGTCTAAGAAGgtatgcattc ... ctcactgcagAGGCTACCTGATGGTGTACGTTTGAGAGGGGACATTCATGTCTTGCTTCTG
EST: CTGATGTCAAGAAAGCTATTGCATGCTTGTTATTTGGGGGGTCTAAGAAG AGGCTACCTGATGGTGTACGTTTGAGAGGGGACATTCATGTCTTGCTTCTGEST: gi|211539704|gb|FK958372.1|FK958372
genomic: CTGATGTCAAGAAAGCTATTGCATGCTTGTTATTTGGGGGGTCTAAGAAGgtatgcattc ... ctcactgcagAGGCTACCTGATGGTGTACGTTTGAGAGGGGACATTCATGTCTTGCTTCTG
EST: CTGATGTCAAGAAAGCTATTGCATGCTTGTTATTTGGGGGGTCTAAGAAG AGGCTACCTGATGGTGTACGTTTGAGAGGGGACATTCATGTCTTGCTTCTGEST: gi|67031386|gb|CO460135.1|CO460135
genomic: CTGATGTCAAGAAAGCTATTGCATGCTTGTTATTTGGGGGGTCTAAGAAGgtatgcattc ... ctcactgcagAGGCTACCTGATGGTGTACGTTTGAGAGGGGACATTCATGTCTTGCTTCTG
EST: CTGATGTCAAGAAAGCTATTGCATGCTTGTTATTTGGGGGGTCTAAGAAG AGGCTACCTGATGGTGTACGTTTGAGAGGGGACATTCATGTCTTGCTTCTGEST: gi|211539703|gb|FK958371.1|FK958371
genomic: CTGATGTCAAGAAAGCTATTGCATGCTTGTTATTTGGGGGGTCTAAGAAGgtatgcattc ... ctcactgcagAGGCTACCTGATGGTGTACGTTTGAGAGGGGACATTCATGTCTTGCTTCTG
EST: CTGATGTCAAGAAAGCTATTGCATGCTTGTTATTTGGGGGGTCTAAGAAG AGGCTACCTGATGGTGTACGTTTGAGAGGGGACATTCATGTCTTGCTTCTG
genomic: CTGATGTCAAGAAAGCTATTGCATGCTTGTTATTTGGGGGGTCTAAGAAGgtatgcattc ... ctcactgcagAGGCTACCTGATGGTGTACGTTTGAGAGGGGACATTCATGTCTTGCTTCTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGCATATGCCAAGCTCTGCTCAATGATTGGTCCTTCAATTTATGGTCATTCTGATGTCAAGAAAGCTATTGCATGCTTGTTATTTGGGGGGTCTAAGAAGgtatgcattcttatcaagcccctatatgttttgtagaaaaaaatgctcctccatttgccctaattatgtccttattcttcgaactactctcactgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG