1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
ACTTCTACTTTTCATTGCAGACATCCCATATATCTTGGAAAATGGTTTAAGTAGCTTGCTTCATGCATCTGCAGCATTGGCTGTAATCAATTGCCTACCGgtgagtctttacttcagttcactagcatccgattgtaacatttctacgtctttgattagaagaggatagctctagaagaatttggtgtcaatctctagaa...
species | Zea mays |
transcript | GRMZM2G033671_T02 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GTAGCTTGCTTCATGCATCTGCAGCATTGGCTGTAATCAATTGCCTACCG GTGTATTTTCTGGATGGTGAAGCGAYTCTGGAGACTACCTTAAGCTATGTAEST: gi|60394272|gb|DN227142.1|DN227142
genomic: GTAGCTTGCTTCATGCATCTGCAGCATTGGCTGTAATCAATTGCCTACCGgtgagtcttt ... caatggatagGTGTATTTTCTGGATGGTGAAGCGATTCTGGAGACTACCTTAAGCTATGTA
EST: GTAGCTTGCTTCATGCATCTGCAGCATTGGCTGTAATCAATTGCCTACCG GTGTATTTTCTGGATGGTGAAGCGATTCTGGAGACTACCTTAAGCTATGTAEST: gi|78025658|gb|DV494045.1|DV494045
genomic: GTAGCTTGCTTCATGCATCTGCAGCATTGGCTGTAATCAATTGCCTACCGgtgagtcttt ... caatggatagGTGTATTTTCTGGATGGTGAAGCGATTCTGGAGACTACCTTAAGCTATGTA
EST: GTAGCTTGCTTCATGCATCTGCAGCATTGGCTGTAATCAATTGCCTACCG GTGTATTTTCTGGATGGTGAAGCGATTCTGGAGACTACCTTAAGCTATGTAEST: gi|60342249|gb|DN209222.1|DN209222
genomic: GTAGCTTGCTTCATGCATCTGCAGCATTGGCTGTAATCAATTGCCTACCGgtgagtcttt ... caatggatagGTGTATTTTCTGGATGGTGAAGCGATTCTGGAGACTACCTTAAGCTATGTA
EST: GTAGCTTGCTTCATGCATCTGCAGCATTGGCTGTAATCAATTGCCTACCG GTGTATTTTCTGGATGGTGAAGCGATTCTGGAGACTACCTTAAGCTATGTAEST: gi|89250528|gb|DY622314.1|DY622314
genomic: GTAGCTTGCTTCATGCATCTGCAGCATTGGCTGTAATCAATTGCCTACCGgtgagtcttt ... caatggatagGTGTATTTTCTGGATGGTGAAGCGATTCTGGAGACTACCTTAAGCTATGTA
EST: GTAGCTTGCTTCATGCATCTGCAGCATTGGCTGTAATCAATTGCCTACCG GTGTATTTTCTGGATGGTGAAGCGATTCTGGAGACTACCTTAAGCTATGTAEST: gi|12973617|gb|BG268570.1|BG268570
genomic: GTAGCTTGCTTCATGCATCTGCAGCATTGGCTGTAATCAATTGCCTACCGgtgagtcttt ... caatggatagGTGTATTTTCTGGATGGTGAAGCGATTCTGGAGACTACCTTAAGCTATGTA
EST: GTAGCTTGCTTCATGCATCTGCAGCATTGGCTGTAATCAATTGCCTACCG GTGTATTTTCTGGATGGTGAAGCGATTCTGGAGACTACCTTAAGCTATGTAEST: gi|5706254|gb|AI942030.1|AI942030
genomic: GTAGCTTGCTTCATGCATCTGCAGCATTGGCTGTAATCAATTGCCTACCGgtgagtcttt ... caatggatagGTGTATTTTCTGGATGGTGAAGCGATTCTGGAGACTACCTTAAGCTATGTA
EST: GTAGCTTGCTTCATGCATCTGCAGCATTGGCTGTAATCAATTGCCTACCG GTGTATTTTCTGGATGGTGAAGCGATTCTGGAGACTACCTTAAGCTATGTA
genomic: GTAGCTTGCTTCATGCATCTGCAGCATTGGCTGTAATCAATTGCCTACCGgtgagtcttt ... caatggatagGTGTATTTTCTGGATGGTGAAGCGATTCTGGAGACTACCTTAAGCTATGTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTTCTACTTTTCATTGCAGACATCCCATATATCTTGGAAAATGGTTTAAGTAGCTTGCTTCATGCATCTGCAGCATTGGCTGTAATCAATTGCCTACCGgtgagtctttacttcagttcactagcatccgattgtaacatttctacgtctttgattagaagaggatagctctagaagaatttggtgtcaatctctagaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tagaagaa