1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
TTTCCTTTGCCACTGAAGAAGCAACTTGTGGATGATTGGGAGTTTGTTACGCAGATGGGTAAGgtatttagttctctgtctcttacccttcattagtatctcatattctcatgtaccatttgatgtctcatatcctagactaaatattaaaatgttttgtgtt...
species | Zea mays |
transcript | GRMZM2G484880_T03 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TGAAGAAGCAACTTGTGGATGATTGGGAGTTTGTTACGCAGATGGGTAAG CTTGTGAAGCTACCACGATCACCTACTGTTGATGATATTCTAAAGAAGTACEST: gi|78544095|gb|DV621593.1|DV621593
genomic: TGAAGAAGCAACTTGTGGATGATTGGGAGTTTGTTACGCAGATGGGTAAGgtatttagtt ... tggcctgcagCTTGTGAAGCTACCACGATCACCTACTGTTGATGATATTCTAAAGAAGTAC
EST: TGAAGAAGCAACTTGTGGATGATTGGGAGTTTGTTACGCAGATGGGTAAG CTTGTGAAGCTACCACGATCACCTACTGTTGATGATATTCTAAAGAAGTACEST: gi|31997933|gb|CD661838.1|CD661838
genomic: TGAAGAAGCAACTTGTGGATGATTGGGAGTTTGTTACGCAGATGGGTAAGgtatttagtt ... tggcctgcagCTTGTGAAGCTACCACGATCACCTACTGTTGATGATATTCTAAAGAAGTAC
EST: TACGCAGATGGGTAAG CTTGTGAAGCTACCACGATCACCTACTGTTGATGATATTCTAAAGAAGTACEST: gi|37386752|gb|CF630565.1|CF630565
genomic: TACGCAGATGGGTAAGgtatttagtt ... tggcctgcagCTTGTGAAGCTACCACGATCACCTACTGTTGATGATATTCTAAAGAAGTAC
EST: AAGAAGCAACTTGTGGATGATTGGGAGTTTGTTACGCAGAT--G---G CTTGTGAAGCTACCACGATCACCTACTGTTGATGATATTCTAAAGAAGTACEST: gi|22546503|gb|BU098814.1|BU098814
genomic: AAGAAGCAACTTGTGGATGATTGGGAGTTTGTTACGCAGATGGGTAAGgtatttagtt ... tggcctgcagCTTGTGAAGCTACCACGATCACCTACTGTTGATGATATTCTAAAGAAGTAC
EST: TGAAGAAGCAACTTGTGGATGATTGGGAGTTTGTTACGCAGATGGGTAAG CTTGTGAAGCTACCACGATCACCTACTGTTGATGATATTCTAAAGAAGTACEST: gi|93284202|gb|EB676466.1|EB676466
genomic: TGAAGAAGCAACTTGTGGATGATTGGGAGTTTGTTACGCAGATGGGTAAGgtatttagtt ... tggcctgcagCTTGTGAAGCTACCACGATCACCTACTGTTGATGATATTCTAAAGAAGTAC
EST: TGAAGAAGCAACTTGTGGATGATTGGGAGTTTGTTACGCAGATGGGTAAG CTTGTGAAGCTACCACGATCACCTACTGTTGATGATATTCTAAAGAAGTAC
genomic: TGAAGAAGCAACTTGTGGATGATTGGGAGTTTGTTACGCAGATGGGTAAGgtatttagtt ... tggcctgcagCTTGTGAAGCTACCACGATCACCTACTGTTGATGATATTCTAAAGAAGTAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTCCTTTGCCACTGAAGAAGCAACTTGTGGATGATTGGGAGTTTGTTACGCAGATGGGTAAGgtatttagttctctgtctcttacccttcattagtatctcatattctcatgtaccatttgatgtctcatatcctagactaaatattaaaatgttttgtgtt
- - - - - - TGAAGA
- - - - - - - AAGAAG
- - - - - - - - AGAAGC
- - - - - - - - - AAGCAA
- - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - CAGATG