1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GAATTGGAAGACCCATTGATCTTAATTCATGACAAGAAGGTTACGAACATGCATGCTGTGGTTAAGGTTTTAGAAATGGCTCTGAAGgtagtcttctttgccctcatttagcagtagccgtattggtatcatcatgacctttgttggttcattttttttcattctttgcctggaacag
species | Zea mays |
transcript | GRMZM2G458208_T01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: AGGTTACGAACATGCATGCTGTGGTTAAGGTTTTAGAAATGGCTCTGAAG AAACAAAAGCCTCTACTGATTGTTGCAGAAGATGTGGAAAGTGAAGCATTGEST: gi|31357599|gb|CD441956.1|CD441956
genomic: AGGTTACGAACATGCATGCTGTGGTTAAGGTTTTAGAAATGGCTCTGAAGgtagtcttct ... cctggaacagAAACAAAAGCCTCTACTGATTGTTGCAGAAGATGTGGAAAGTGAAGCATTG
EST: AGGTTACGAACATGCATGCTGTGGTTAAGGTTTTAGAAATGGCTCTGAAG AAACAAAAGCCTCTACTGATTGTTGCAGAAGATGTGGAAAGTGAAGCATTGEST: gi|61119163|gb|DN560124.1|DN560124
genomic: AGGTTACGAACATGCATGCTGTGGTTAAGGTTTTAGAAATGGCTCTGAAGgtagtcttct ... cctggaacagAAACAAAAGCCTCTACTGATTGTTGCAGAAGATGTGGAAAGTGAAGCATTG
EST: AGGTTACGAACATGCATGCTGTGGTTAAGGTTTTAGAAATGGCTCTGAAG AAACAAA-GCCTCTACTGATTGTTGCAGAAGATGTGGAAAGTGAAGCATTGEST: gi|31361464|gb|CD445821.1|CD445821
genomic: AGGTTACGAACATGCATGCTGTGGTTAAGGTTTTAGAAATGGCTCTGAAGgtagtcttct ... cctggaacagAAACAAAAGCCTCTACTGATTGTTGCAGAAGATGTGGAAAGTGAAGCATTG
EST: AGGTTACGAACATGCATGCTGTGGTTAAGGTTTTAGAAATGGCTCTGAAG AAACAAAAGCCTCTACTGATTGTTGCAGAAGATGTGGAAAGTGAAGCATTGEST: gi|5499101|gb|AI854968.1|AI854968
genomic: AGGTTACGAACATGCATGCTGTGGTTAAGGTTTTAGAAATGGCTCTGAAGgtagtcttct ... cctggaacagAAACAAAAGCCTCTACTGATTGTTGCAGAAGATGTGGAAAGTGAAGCATTG
EST: AGGTTACGAACATGCATGCTGTGGTTAAGGTTTTAGAAATGGCTCTGAAG AAACAAAAGCCTCTACTGATTGTTGCAGAAGATGTGGAAAGTGAAGCATTGEST: gi|67016113|gb|CO444862.1|CO444862
genomic: AGGTTACGAACATGCATGCTGTGGTTAAGGTTTTAGAAATGGCTCTGAAGgtagtcttct ... cctggaacagAAACAAAAGCCTCTACTGATTGTTGCAGAAGATGTGGAAAGTGAAGCATTG
EST: AGGTTACGAACATGCATGCTGTGGTTAAGGTTTTAGAAATGGCTCTGAAG AAACAAAAGCCTCTACTGATTGTTGCAGAAGATGTGGAAAGTGAAGCATTGEST: gi|67023196|gb|CO451945.1|CO451945
genomic: AGGTTACGAACATGCATGCTGTGGTTAAGGTTTTAGAAATGGCTCTGAAGgtagtcttct ... cctggaacagAAACAAAAGCCTCTACTGATTGTTGCAGAAGATGTGGAAAGTGAAGCATTG
EST: AGGTTACGAACATGCATGCTGTGGTTAAGGTTTTAGAAATGGCTCTGAAG AAACAAAAGCCTCTACTGATTGTTGCAGAAGATGTGGAAAGTGAAGCATTG
genomic: AGGTTACGAACATGCATGCTGTGGTTAAGGTTTTAGAAATGGCTCTGAAGgtagtcttct ... cctggaacagAAACAAAAGCCTCTACTGATTGTTGCAGAAGATGTGGAAAGTGAAGCATTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAATTGGAAGACCCATTGATCTTAATTCATGACAAGAAGGTTACGAACATGCATGCTGTGGTTAAGGTTTTAGAAATGGCTCTGAAGgtagtcttctttgccctcatttagcagtagccgtattggtatcatcatgacctttgttggttcattttttttcattctttgcctggaacag
- - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG