1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
GAACTGGAAGACCCATTGATCTTAATTCATGACAAGAAAGTGACAAATATGCATGCTGTGGTTAAGGTTTTAGAAATGGCTCTAAAGgtattctgtttgctctcatttaacggtaacagtattggttcattgtgggcctttgctgattctttttttttcattctttgcttggaacag
species | Zea mays |
transcript | GRMZM2G416120_T01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: AAGTGACAAATATGCATGCTGTGGTTAAGGTTTTAGAAATGGCTCTAAAG AAACAAAGGCCTCTACTGATTGTTGCAGAAGATGTGGAAAGTGAAGCATTAEST: gi|31349659|gb|CD434016.1|CD434016
genomic: AAGTGACAAATATGCATGCTGTGGTTAAGGTTTTAGAAATGGCTCTAAAGgtattctgtt ... cttggaacagAAACAAAGGCCTCTACTGATTGTTGCAGAAGATGTGGAAAGTGAAGCATTA
EST: GTTTTAGAAATGGCTCTAAAG AAACAAAGGCCTCTACTGATTGTTGCAGAAGATGTGGAAAGTGAAGCATTGEST: gi|71425566|gb|DR806758.1|DR806758
genomic: GTTTTAGAAATGGCTCTAAAGgtattctgtt ... cttggaacagAAACAAAGGCCTCTACTGATTGTTGCAGAAGATGTGGAAAGTGAAGCATTA
EST: AAGTGACAAATATGCATGCTGTGGTTAAGGTTTTAGAAATGGCTCTAAAG AAACAAAGGCCTCTACTGATTGTTGCAGAAGATGTGGAAAGTGAAGCATTAEST: gi|78078493|gb|DV506906.1|DV506906
genomic: AAGTGACAAATATGCATGCTGTGGTTAAGGTTTTAGAAATGGCTCTAAAGgtattctgtt ... cttggaacagAAACAAAGGCCTCTACTGATTGTTGCAGAAGATGTGGAAAGTGAAGCATTA
EST: TGCATGCTGTGGTTAAGGTTTTAGAAATGGCTCTAAAG AAACAAAGGCCTCTACTGATTGTTGCAGAAGATGTGGAAAGTGAAGCATTAEST: gi|67019174|gb|CO447923.1|CO447923
genomic: TGCATGCTGTGGTTAAGGTTTTAGAAATGGCTCTAAAGgtattctgtt ... cttggaacagAAACAAAGGCCTCTACTGATTGTTGCAGAAGATGTGGAAAGTGAAGCATTA
EST: AAGTGACAAATATGCATGCTGTGGTTAAGGTTTTAGAAATGGCTCTAAAG AAACAAAGGCCTCTACTGATTGTTGCAAAAGATGTGGAAAGTGAAGCATTG
genomic: AAGTGACAAATATGCATGCTGTGGTTAAGGTTTTAGAAATGGCTCTAAAGgtattctgtt ... cttggaacagAAACAAAGGCCTCTACTGATTGTTGCAGAAGATGTGGAAAGTGAAGCATTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAACTGGAAGACCCATTGATCTTAATTCATGACAAGAAAGTGACAAATATGCATGCTGTGGTTAAGGTTTTAGAAATGGCTCTAAAGgtattctgtttgctctcatttaacggtaacagtattggttcattgtgggcctttgctgattctttttttttcattctttgcttggaacag
- - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG