1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GTTGGCCCCAGGTTCTGTTTGAATCCAATCAAAATATTTGGTGGTAGTTTTGGTGGTCCTACATGGTATGAGAACCCATACTACATTTCCCCCAATCAGgtatgttaattcactgttctgaacttctgatgttgagtgttgttcataagtttcaacccaggttaattacttttcatcaagggctagttgataccgtgtt...
species | Zea mays |
transcript | GRMZM2G160458_T01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TTGGTGGTCCTACATGGTATGAGAACCCATACTACATTTCCCCCAATCAG ATCCGTGCACTAGAGAAGAGGCAGAAGGCAGGCAAATATGCCAAGAAGGTGEST: gi|148946147|gb|EC891441.2|EC891441
genomic: TTGGTGGTCCTACATGGTATGAGAACCCATACTACATTTCCCCCAATCAGgtatgttaat ... tttccttcagATCCGTGCACTAGAGAAGAGGCAGAAGGCAGGCAAATATGCCAAGAAGGTG
EST: TTGGTGGTCCTACATGGTATGAGAACCCATACTACATTTCCCCCAATCAG ATCCGTGCACTAGAGAAGAGGCAGAAGGCAGGCAAATATGCCAAGAAGGTGEST: gi|149070865|gb|EE159274.2|EE159274
genomic: TTGGTGGTCCTACATGGTATGAGAACCCATACTACATTTCCCCCAATCAGgtatgttaat ... tttccttcagATCCGTGCACTAGAGAAGAGGCAGAAGGCAGGCAAATATGCCAAGAAGGTG
EST: TTGGTGGTCCTACATGGTATGAGAACCCATACTACATTTCCCCCAATCAG ATCCGTGCACTAGAGAAGAGGCAGAAGGCAGGCAAATATGCCAAGAAGGTGEST: gi|110196089|gb|EC877986.1|EC877986
genomic: TTGGTGGTCCTACATGGTATGAGAACCCATACTACATTTCCCCCAATCAGgtatgttaat ... tttccttcagATCCGTGCACTAGAGAAGAGGCAGAAGGCAGGCAAATATGCCAAGAAGGTG
EST: TTGGTGGTCCTACATGGTATGAGAACCCATACTACATTTCCCCCAATCAG ATCCGTGCACTAGAGAAGAGGCAGAAGGCAGGCAAATATGCCAAGAAGGTGEST: gi|33468119|gb|CF245168.1|CF245168
genomic: TTGGTGGTCCTACATGGTATGAGAACCCATACTACATTTCCCCCAATCAGgtatgttaat ... tttccttcagATCCGTGCACTAGAGAAGAGGCAGAAGGCAGGCAAATATGCCAAGAAGGTG
EST: TTGGTGGTCCTACATGGTATGAGAACCCATACTACATTTCCCCCAATCAG ATCCGTGCGCTAGAGAAGAGGCAGAAGGCAGGCAAATATGCCAAGAAGGTGEST: gi|71429925|gb|DR810975.1|DR810975
genomic: TTGGTGGTCCTACATGGTATGAGAACCCATACTACATTTCCCCCAATCAGgtatgttaat ... tttccttcagATCCGTGCACTAGAGAAGAGGCAGAAGGCAGGCAAATATGCCAAGAAGGTG
EST: TTGGTGGTCCTACATGGTATGAGAACCCATACTACATTTCCCCCAATCAG ATCCGTGCACTAGAGAAGAGGCAGAAGGCAGGCAAATATGCCAAGAAGGTGEST: gi|211114336|gb|FL479348.1|FL479348
genomic: TTGGTGGTCCTACATGGTATGAGAACCCATACTACATTTCCCCCAATCAGgtatgttaat ... tttccttcagATCCGTGCACTAGAGAAGAGGCAGAAGGCAGGCAAATATGCCAAGAAGGTG
EST: TTGGTGGTCCTACATGGTATGAGAACCCATACTACATTTCCCCCAATCAG ATCCGTGCACTAGAGAAGAGGCAGAAGGCAGGCAAATATGCCAAGAAGGTGEST: gi|50332850|gb|CO527976.1|CO527976
genomic: TTGGTGGTCCTACATGGTATGAGAACCCATACTACATTTCCCCCAATCAGgtatgttaat ... tttccttcagATCCGTGCACTAGAGAAGAGGCAGAAGGCAGGCAAATATGCCAAGAAGGTG
EST: TTGGTGGTCCTACATGGTATGAGAACCCATACTACATTTCCCCCAATCAG ATCCTTGCACTAGAGAAGAGGCAGAAGGCAGGCAAATATGCCAAGAAGGTGEST: gi|60347622|gb|DN214595.1|DN214595
genomic: TTGGTGGTCCTACATGGTATGAGAACCCATACTACATTTCCCCCAATCAGgtatgttaat ... tttccttcagATCCGTGCACTAGAGAAGAGGCAGAAGGCAGGCAAATATGCCAAGAAGGTG
EST: TTGGTGGTCCTACATGGTATGAGAACCCATACTACATTTCCCCCAATCAG ATCCGTGCACTAGAGAAGAGGCAGAAGGCAGGCAAATATGCCAAGAAGGTGEST: gi|60347601|gb|DN214574.1|DN214574
genomic: TTGGTGGTCCTACATGGTATGAGAACCCATACTACATTTCCCCCAATCAGgtatgttaat ... tttccttcagATCCGTGCACTAGAGAAGAGGCAGAAGGCAGGCAAATATGCCAAGAAGGTG
EST: AACCCATAATACATTTCCCCCAATCAG ATCCGTGCACTAGAGAAGAGGCAGAAGGCAGGCAAATAAGCCAAGAAGGTGEST: gi|78089923|gb|DV518297.1|DV518297
genomic: AACCCATACTACATTTCCCCCAATCAGgtatgttaat ... tttccttcagATCCGTGCACTAGAGAAGAGGCAGAAGGCAGGCAAATATGCCAAGAAGGTG
EST: TTGGTGGTCCTACATGGTATGAGAACCCATACTACATTTCCCCCAATCAG ATCCGTGCACTAGAGAAGAGGCAGAAGGCAGGCAAATATGCCAAGAAGGTGEST: gi|86469691|gb|DY236061.1|DY236061
genomic: TTGGTGGTCCTACATGGTATGAGAACCCATACTACATTTCCCCCAATCAGgtatgttaat ... tttccttcagATCCGTGCACTAGAGAAGAGGCAGAAGGCAGGCAAATATGCCAAGAAGGTG
EST: TTGGTGGTCCTACATGGTATGAGAACCCATACTACATTTCCCCCAATCAG ATCCGTGCACTAGAGAAGAGGCAGAAGGCAGGCAAATATGCCAAGAAGGTG
genomic: TTGGTGGTCCTACATGGTATGAGAACCCATACTACATTTCCCCCAATCAGgtatgttaat ... tttccttcagATCCGTGCACTAGAGAAGAGGCAGAAGGCAGGCAAATATGCCAAGAAGGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTGGCCCCAGGTTCTGTTTGAATCCAATCAAAATATTTGGTGGTAGTTTTGGTGGTCCTACATGGTATGAGAACCCATACTACATTTCCCCCAATCAGgtatgttaattcactgttctgaacttctgatgttgagtgttgttcataagtttcaacccaggttaattacttttcatcaagggctagttgataccgtgtt
- - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG