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ATGGTTGACAAGTTAGATCAGGGATTGGTGCCAGCTGAACTTGGGCCACTGGATTACAAAGGACTGTACAATgtaatgagcactgctgtttcttttttcgtctctttgaagggcttacatcagcgttgtgacatgcttttactatattatattaaaaataaagtaaacaaat...
species | Zea mays |
transcript | GRMZM2G044819_T03 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: GATTGGTGCCAGCTGAACTGGGGCCACTGGATTACAAAGGACTGTACAAT GCTGTTTCCAAAGCACTTTTTCGAGCACATGTAGAAGGCCAACTTAAGEST: gi|22935698|gb|BU571973.1|BU571973
genomic: GATTGGTGCCAGCTGAACTTGGGCCACTGGATTACAAAGGACTGTACAATgtaatgagca ... tttttttcagGCTGTTTCCAAAGCACTTTTTCGAGCACATGTAGAAGGCCAACTTAAG
EST: GATTGGTGCCAGCTGAACTTGGGCCACTGGATTACAAAGGACTGTACAAT GCTGTTTCCAAAGCACTTTTTCGAGCACATGTAGAAGEST: gi|32937883|gb|CF042702.1|CF042702
genomic: GATTGGTGCCAGCTGAACTTGGGCCACTGGATTACAAAGGACTGTACAATgtaatgagca ... tttttttcagGCTGTTTCCAAAGCACTTTTTCGAGCACATGTAGAAG
EST: GATTGGTGCCAGCTGAACTTGGGCCACTGGATTACAAAGGACTGTACAAT GCTGTTTCCGAAGCACTTTTTCGAGCACATGTAGAAGGCCAACTTAAGEST: gi|87156662|gb|DY401451.1|DY401451
genomic: GATTGGTGCCAGCTGAACTTGGGCCACTGGATTACAAAGGACTGTACAATgtaatgagca ... tttttttcagGCTGTTTCCAAAGCACTTTTTCGAGCACATGTAGAAGGCCAACTTAAG
EST: GATTGGTGCCAGCTGAACTTGGGCCACTGGATTACAAAGGACTGTACAAT GCTGTTTCCAAAGCACTTTTTCGAGCACATGTAGAAGGCCAACTTAAG
genomic: GATTGGTGCCAGCTGAACTTGGGCCACTGGATTACAAAGGACTGTACAATgtaatgagca ... tttttttcagGCTGTTTCCAAAGCACTTTTTCGAGCACATGTAGAAGGCCAACTTAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGGTTGACAAGTTAGATCAGGGATTGGTGCCAGCTGAACTTGGGCCACTGGATTACAAAGGACTGTACAATgtaatgagcactgctgtttcttttttcgtctctttgaagggcttacatcagcgttgtgacatgcttttactatattatattaaaaataaagtaaacaaat
- - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaataaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -taaacaaa