1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
ACTAAGTATCGGGAGAGGGTTCTTGGCCTCATGTTGGTTTCACCTGTATGCAAAGCCCCCTCCTGGAGCGAGTGGCTGTATAATAAGgttataaccagcgactttacttcagttatttcatatgctttatgtccttctgccaactattcatttcattgtacagtattttagagtgttaacctcagaatctcatgtaccag
species | Zea mays |
transcript | GRMZM2G413857_T03 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: TTTCACCTGTATGCAAAGCCCCCTCCTGGAGCGAGTGGCTGTATAATAAG GTATTATCAAACTTGCTTTATTACTACGGGACACGTGGGTTAGTCAAGGAAEST: gi|71443344|gb|DR824394.1|DR824394
genomic: TTTCACCTGTATGCAAAGCCCCCTCCTGGAGCGAGTGGCTGTATAATAAGgttataacca ... catgtaccagGTATTATCAAACTTGCTTTATTACTACGGGACACGTGGGTTAGTCAAGGAA
EST: TTTCACCTGTATGCAAAGCCCCCTCCTGGAGCGAGTGGCTGTATAATAAG GTATTATCAAACTTGCTTTATTACTACGGGACACGTGGGTTAGTCAAGGAAEST: gi|26457201|gb|CA828784.1|CA828784
genomic: TTTCACCTGTATGCAAAGCCCCCTCCTGGAGCGAGTGGCTGTATAATAAGgttataacca ... catgtaccagGTATTATCAAACTTGCTTTATTACTACGGGACACGTGGGTTAGTCAAGGAA
EST: TTTCACCTGTATGCAAAGCCCCCTCCTGGAGCGAGTGGCTGTATAATAAG GTATTATCAAACTTGCTTTATTACTACGGGACACGTGGGTTAGTCAAGGAAEST: gi|21395240|gb|BQ539670.1|BQ539670
genomic: TTTCACCTGTATGCAAAGCCCCCTCCTGGAGCGAGTGGCTGTATAATAAGgttataacca ... catgtaccagGTATTATCAAACTTGCTTTATTACTACGGGACACGTGGGTTAGTCAAGGAA
EST: TTTCACCTGTATGCAAAGCCCCCTCCTGGAGCGAGTGGCTGTATAATAAG GTATTATCAAACTTGCTTTATTACTACGGGACACGTGGGTTAGTCAAGGAAEST: gi|211436829|gb|FL403332.1|FL403332
genomic: TTTCACCTGTATGCAAAGCCCCCTCCTGGAGCGAGTGGCTGTATAATAAGgttataacca ... catgtaccagGTATTATCAAACTTGCTTTATTACTACGGGACACGTGGGTTAGTCAAGGAA
EST: TTTCACCTGTATGCAAAGCCCCCTCCTGGAGCGAGTGGCTGTATAATAAG GTATTATCAAACTTGCTTTATTACTACGGGACACGTGGGTTAGTCAAAGAAEST: gi|71443847|gb|DR824897.1|DR824897
genomic: TTTCACCTGTATGCAAAGCCCCCTCCTGGAGCGAGTGGCTGTATAATAAGgttataacca ... catgtaccagGTATTATCAAACTTGCTTTATTACTACGGGACACGTGGGTTAGTCAAGGAA
EST: TTTCACCTGTATGCAAAGCCCCCTCCTGGAGCGAGTGGCTGTATAATAAG GTATTATCAAACTTGCTTTATTACTACGGGACACGTGGGTTAGTCAAGGAAEST: gi|19351457|gb|BM895989.1|BM895989
genomic: TTTCACCTGTATGCAAAGCCCCCTCCTGGAGCGAGTGGCTGTATAATAAGgttataacca ... catgtaccagGTATTATCAAACTTGCTTTATTACTACGGGACACGTGGGTTAGTCAAGGAA
EST: TTTCACCTGTATGCAAAGCCCCCTCCTGGAGCGAGTGGCTGTATAATAAG GTATTATCAAACTGGCTTTATTACTACGGGACACGTGGGTTAGTCAAGGAA
genomic: TTTCACCTGTATGCAAAGCCCCCTCCTGGAGCGAGTGGCTGTATAATAAGgttataacca ... catgtaccagGTATTATCAAACTTGCTTTATTACTACGGGACACGTGGGTTAGTCAAGGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTAAGTATCGGGAGAGGGTTCTTGGCCTCATGTTGGTTTCACCTGTATGCAAAGCCCCCTCCTGGAGCGAGTGGCTGTATAATAAGgttataaccagcgactttacttcagttatttcatatgctttatgtccttctgccaactattcatttcattgtacagtattttagagtgttaacctcagaatctcatgtaccag
- - - - - - - - - - - - - - - - - - - - - - - - GCAAAG