1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TACTTTTGAGGGAACAAACCAATTAATATATCCAGAGACTTGGTTCTTTATGCTTGTTGTGGCTACTTGTGTGTTGACTCAGATGAATTATCTGAACAAGgtttgttcaacttgttacacattgctttcattcagtaaccttagttctatgacataactatgtacattctagctgcaaaaatggtatgttgatagagaag...
species | Zea mays |
transcript | GRMZM2G120175_T03 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CAGATGAATTATCTGAACAAG GCACTTGACACGTTCAACACGGCAATTGTATCTCCAATATATTATGTAATGEST: gi|60354097|gb|DN221070.1|DN221070
genomic: CAGATGAATTATCTGAACAAGgtttgttcaa ... tttgctgtagGCACTTGACACGTTCAACACGGCAATTGTATCTCCAATATATTATGTAATG
EST: TGCTTGTTGTGGCTACTTGTGTGTTGACTCAGATGAATTATCTGAACAAG GCACTTGACACGTTCAACACGGCAATTGTATCTCCAATATATTATGTAATGEST: gi|78120401|gb|DV538785.1|DV538785
genomic: TGCTTGTTGTGGCTACTTGTGTGTTGACTCAGATGAATTATCTGAACAAGgtttgttcaa ... tttgctgtagGCACTTGACACGTTCAACACGGCAATTGTATCTCCAATATATTATGTAATG
EST: TGCTTGTTGTGGCTACTTGTGTGTTGACTCAGATGAATTATCTGAACAAG GCACTTGACACGTTCAACACGGCAATTGTATCTCCAATATATTATGTAATGEST: gi|76281094|gb|DV020662.1|DV020662
genomic: TGCTTGTTGTGGCTACTTGTGTGTTGACTCAGATGAATTATCTGAACAAGgtttgttcaa ... tttgctgtagGCACTTGACACGTTCAACACGGCAATTGTATCTCCAATATATTATGTAATG
EST: TGCTTGTTGTGGCTACTTGTGTGTTGACTCAGATGAATTATCTGAACAAG GCACTTGACACGTTTCA-CACGGNCA-TTGTATCTCCAATATATTAEST: gi|148943740|gb|EC888810.2|EC888810
genomic: TGCTTGTTGTGGCTACTTGTGTGTTGACTCAGATGAATTATCTGAACAAGgtttgttcaa ... tttgctgtagGCACTTGACACGTT-CAACACGG-CAATTGTATCTCCAATATATTA
EST: TGCTTGTTGTGGCTACTTGTGTGTTGACTCAGATGAATTATCTGAACAAG GCACTTGACACGTTCAACACGGCAATTGTATCTCCAATATATTATGTAATGEST: gi|149085220|gb|EE174728.2|EE174728
genomic: TGCTTGTTGTGGCTACTTGTGTGTTGACTCAGATGAATTATCTGAACAAGgtttgttcaa ... tttgctgtagGCACTTGACACGTTCAACACGGCAATTGTATCTCCAATATATTATGTAATG
EST: TGCTTGTTGTGGCTACTTGTGTGTTGACTCAGATGAATTATCTGAACAAG GCACTTGACACGTTCAACACGGCAATTGTATCTCCAATATATTATGTAATGEST: gi|76287457|gb|DV027025.1|DV027025
genomic: TGCTTGTTGTGGCTACTTGTGTGTTGACTCAGATGAATTATCTGAACAAGgtttgttcaa ... tttgctgtagGCACTTGACACGTTCAACACGGCAATTGTATCTCCAATATATTATGTAATG
EST: TGCTTGTTGTGGCTACTTGTGTGTTGACTCAGATGAATTATCTGAACAAG GCACTTGACACGTTCAACACGGCAATTGTATCTCCAATATATTATGTAATG
genomic: TGCTTGTTGTGGCTACTTGTGTGTTGACTCAGATGAATTATCTGAACAAGgtttgttcaa ... tttgctgtagGCACTTGACACGTTCAACACGGCAATTGTATCTCCAATATATTATGTAATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TACTTTTGAGGGAACAAACCAATTAATATATCCAGAGACTTGGTTCTTTATGCTTGTTGTGGCTACTTGTGTGTTGACTCAGATGAATTATCTGAACAAGgtttgttcaacttgttacacattgctttcattcagtaaccttagttctatgacataactatgtacattctagctgcaaaaatggtatgttgatagagaag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG