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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCCTCCTTTATTGGCCGTGCTTCAACCAAGAACAAGGGCAGAATGGCTCGTTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttctaggaagctctgttaccggactgttttgtatgctattgtttcctcgatccaaaagcatcatcttgattgttttatacctttatatttggtttcag

Basic information

species Zea mays
transcript GRMZM2G110233_T01
intron # 6
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G110233_T01 (Zea mays), 5'ss of exon 6
lower sequence: LOC_Os03g22880.1 (Oryza sativa), 5'ss of exon 6
TCCTCCTTTATTGGCCGTGCTTCAACCAAGAACAAGGGCAGAATGGCTCGTTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttctaggaagctctgttaccggactgttttgtatgctattgtttcctcgatccaaaagcatcatcttgattgttttatacctttatatttggtttcag
|| ||||| |||||||||||||||||||||||||| |||||||||||| | || ||||| ||||| ||||| ||||| ||||||||||| || || || ||||||||  |   || |||||| ||    ||| | ||   ||| |   | ||    |  |||| |    ||    | ||||  |  |                
TCATCCTTCATTGGCCGTGCTTCAACCAAGAACAAAGGCAGAATGGCTAGATATCTGGCGAACAAGTGCTCCATTGCATCACGCATTGATTGTTATTCAGgttagttgcat--agttctgtttccaatttgtat-gtccactagttactgcttttgctgaaagaacttgctgccatattttggaattcag-------------

upper sequence: GRMZM2G110233_T01 (Zea mays), 5'ss of exon 6
lower sequence: GLYMA07G11560.1 (Glycine max), 5'ss of exon 6
TCCTCCTTTATTGGCCGTGCTTCAACCAAGAACAAGGGCAGAATGGCTCGTTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttctaggaagctctgttaccggactgttttgtatgctattgtttcctcgatccaaaagcatcatcttgattgttttatacctttatatttggtttcag
|| || ||||| || || || ||  |||| || |||||| |||| ||||| || || || |||||||| || ||||||||||| ||||||||||  || |||| |||      |  |   ||   | | | || ||  |    ||  | ||||  | |       | |   ||||| | || |||  | ||            
TCTTCTTTTATCGGTCGAGCATCTGCCAAAAATAAGGGCCGAATAGCTCGCTATCTTGCTAACAAATGTTCAATTGCTTCACGGATTGACTGCTTTTCTGgtttgtttcttacatttaaattttagcaatcttatgccttac-ttagtacctcattgct----tgttaggatgattttgttgtactgtgatgcag--------

upper sequence: GRMZM2G110233_T01 (Zea mays), 5'ss of exon 6
lower sequence: GLYMA17G13770.1 (Glycine max), 5'ss of exon 6
TCCTCCTTTATTGGCCGTGCTTCAACCAAGAACAAGGGCAGAATGGCTCGTTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttctaggaagctctgttaccggactgttttgtatgctattgtttcctcgatccaaaagcatcatcttgattgttttatacctttatatttggtttcag
|| || |||||||| || || ||  |||| || ||||| |||||||||||||| || |||||||||||||| ||||| ||||| ||||||||||  || |||| |||    | |  |          ||| |    |||   || | |      | ||     | |  || ||||| | |  || ||| ||            
TCTTCTTTTATTGGTCGGGCATCTGCCAAAAATAAGGGTAGAATGGCTCGTTATCTTGCAAACAAATGCTCAATTGCATCACGGATTGACTGCTTTTCTGgtttgtttcttgcatattc--------actttagcatatttcatggctgtacatagcc-----ctttgtcatgattttgtggtatcttaatgcag--------

upper sequence: GRMZM2G110233_T01 (Zea mays), 5'ss of exon 6
lower sequence: GLYMA05G03150.1 (Glycine max), 5'ss of exon 6
TCCTCCTTTATTGGCCGTGCTTCAACCAAGAACAAGGGCAGAATGGCTCGTTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttctaggaagctctgttaccggactgttttgtatgctattgtttcctcgatccaaaagcatcatcttgattgttttatacctttatatttggtttcag
|| || |||||||| || || ||  |||| || ||||||||||||||||| || || |||||||||||||| ||||| ||||| ||||||||||   | |||| |||         ||| | |      | ||   | |   | | | || | |  |   |   | ||  ||| |  |  | || |||| ||  |   | |||
TCTTCTTTTATTGGTCGGGCATCTGCCAAAAATAAGGGCAGAATGGCTCGATATCTTGCAAACAAATGCTCAATTGCATCACGGATTGACTGCTTTGCTGgtttgtt---------tctttca------tattcactttagcaatatctcatgg--ctgtacatagcactttg-tcatgatttagctttgtacctcaatgcag

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|60399828|gb|DN232638.1|DN232638
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|32838887|gb|CD978568.1|CD978568
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACTTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|60348613|gb|DN215586.1|DN215586
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|4826173|gb|AI667801.1|AI667801
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|78025462|gb|DV493849.1|DV493849
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|12970246|gb|BG266887.1|BG266887
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|60401403|gb|DN234210.1|DN234210
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|32838321|gb|CD977999.1|CD977999
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACTTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|15427127|gb|BI542949.1|BI542949
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|32936770|gb|CF041589.1|CF041589
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGACAAAAGTTGCGCGAGCAAGTCGAGGAGA
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|32943873|gb|CF048692.1|CF048692
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|4314505|gb|AI461559.1|AI461559
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|26557103|gb|CA829338.1|CA829338
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|32825586|gb|CD965308.1|CD965308
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGGGCGAGCAAGTCGAGGAGA
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|30032055|gb|CB833906.1|CB833906
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|18450820|gb|BM429098.1|BM429098
EST:     AAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
genomic: AAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|31405979|gb|CD484711.1|CD484711
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|32826420|gb|CD966098.1|CD966098
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|33092580|gb|CF052574.1|CF052574
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|32838000|gb|CD977678.1|CD977678
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACACATTGACTGCTACTCGG                         AGGCTAGTACTTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|211350997|gb|FL171088.1|FL171088
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAS-AAGNTCGAGGAG
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAG-TCGAGGAG
EST: gi|211350991|gb|FL171082.1|FL171082
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCSRGGADK
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAG-
EST: gi|15079865|gb|BI388861.1|BI388861
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|30031583|gb|CB833434.1|CB833434
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|60341811|gb|DN208784.1|DN208784
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|60356645|gb|DN223618.1|DN223618
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|18648777|gb|BM497596.1|BM497596
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|61117986|gb|DN558947.1|DN558947
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTAGAGGAGA
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|32825911|gb|CD965589.1|CD965589
EST:     TCACCTGGCGAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|113691323|gb|DW850390.1|DW850390
EST:     CAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAA-GTTGCGCGAGCAAGTCGAGGAGA
genomic: CAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|4837466|gb|AI670556.1|AI670556
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|211350988|gb|FL171079.1|FL171079
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|60356892|gb|DN223865.1|DN223865
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCAAGCAAGTCGAGGAGA
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGTCGAGGAGA
EST: gi|211350992|gb|FL171083.1|FL171083
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAS-A-GNTCGAGGAG
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAG-TCGAGGAG
EST: gi|29543378|gb|CB603774.1|CB603774
EST:     TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGG                         AGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCA-GTACGAGGAG
genomic: TTACCTGGCAAACAAATGCTCGATTGCTTCACGCATTGACTGCTACTCGGgttagttcta ... ttggtttcagAGGCTAGTACCTCTGTCTTTGGGCAAAAGTTGCGCGAGCAAGT-CGAGGAG