1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
AGCCTTGCAGACAGTTGCTTTCCTATTAATCAAGGTCTTGCTGCCAGCCGTCTTCATGgtaagtggaatgtgagtgaatgtaatgatcattcactcatattttccttgtatgcctctttccaatgcagctagcattgtatatatttcagatgtagctggttttgtagatctttttctgatgtagtttgtcccgcag
species | Zea mays |
transcript | GRMZM2G095323_T03 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: AGACAGTTGCTTTCCTATTAATCAAGGTCTTGCTGCCAGCCGTCTTCATG AATTTTTCTTGCGCCAGTTTTGTGATGCTCACACTTGCAGTAAGGEST: gi|71310796|gb|DR791700.1|DR791700
genomic: AGACAGTTGCTTTCCTATTAATCAAGGTCTTGCTGCCAGCCGTCTTCATGgtaagtggaa ... tgtcccgcagAATTTTTCTTGCGCCAGTTTTGTGATGCTCACACTTGCAGTAAGG
EST: AGACAGTTGCTTTCCTATTAATCAAGGTCTTGCTGCCAGCCGTCTTCATG AATTTTTCTTGCGCCAGTTTTGTGATGCTCACACTTGCAGTAAGGGAACAAEST: gi|71773093|gb|DR971011.1|DR971011
genomic: AGACAGTTGCTTTCCTATTAATCAAGGTCTTGCTGCCAGCCGTCTTCATGgtaagtggaa ... tgtcccgcagAATTTTTCTTGCGCCAGTTTTGTGATGCTCACACTTGCAGTAAGGGAACAA
EST: AGACAGTTGCTTTCCTATTAATCAAGGTCTTGCTGCCAGCCGTCTTCATG AATTTTTCTTGCGCCCGTTTTGTGATGCTCACACTTGCAGTAAGGGAACAAEST: gi|74233328|gb|DT641242.1|DT641242
genomic: AGACAGTTGCTTTCCTATTAATCAAGGTCTTGCTGCCAGCCGTCTTCATGgtaagtggaa ... tgtcccgcagAATTTTTCTTGCGCCAGTTTTGTGATGCTCACACTTGCAGTAAGGGAACAA
EST: AGACAGTTGCTTTCCTATTAATCAAGGTCTTGCTGCCAGCCGTCTTCATG AATTTTTCTTGCGCCAGTTTTGTGATGCTCACACTTGCAGTAAGGGAACAAEST: gi|78116974|gb|DV535361.1|DV535361
genomic: AGACAGTTGCTTTCCTATTAATCAAGGTCTTGCTGCCAGCCGTCTTCATGgtaagtggaa ... tgtcccgcagAATTTTTCTTGCGCCAGTTTTGTGATGCTCACACTTGCAGTAAGGGAACAA
EST: AGACAGTTGCTTTCCTATTAATCAAGGTCTTGCTGCCAGCCGTCTTCATG AATTTTTCTTGCGCCAGTTTTGTGATGCTCACACTTGCAGTAAGGGAACAAEST: gi|78115630|gb|DV534018.1|DV534018
genomic: AGACAGTTGCTTTCCTATTAATCAAGGTCTTGCTGCCAGCCGTCTTCATGgtaagtggaa ... tgtcccgcagAATTTTTCTTGCGCCAGTTTTGTGATGCTCACACTTGCAGTAAGGGAACAA
EST: AGACAGTTGCTTTCCTATTAATCAAGGTCTTGCTGCCAGCCGTCTTCATG AATTTTTCTTGCGCCAG
genomic: AGACAGTTGCTTTCCTATTAATCAAGGTCTTGCTGCCAGCCGTCTTCATGgtaagtggaa ... tgtcccgcagAATTTTTCTTGCGCCAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGCCTTGCAGACAGTTGCTTTCCTATTAATCAAGGTCTTGCTGCCAGCCGTCTTCATGgtaagtggaatgtgagtgaatgtaatgatcattcactcatattttccttgtatgcctctttccaatgcagctagcattgtatatatttcagatgtagctggttttgtagatctttttctgatgtagtttgtcccgcag
- - - - - - - - - - - - - - - - - - - TGCTGC