1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GGCCAACAAGTGCTGTAACATGGCTATATGTTAGCCTTTTGGATTTTATTCAGATGAAATCAAAATGTTGCTTTATCCTTCTTGATGTCATTCCAGTAGGgtaagttattgttaaaattcatataaacgttctatatttcgttgtttaagatttttttaatttcagtacactagcttatcactattgtttcttgatttca...
species | Zea mays |
transcript | GRMZM2G164175_T01 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CAGATGAAATCAAAATGTTGCTTTATCCTTCTTGATGTCATTCCAGTAGG GGCAATTGTCCTTGCEST: gi|211171690|gb|FL201321.1|FL201321
genomic: CAGATGAAATCAAAATGTTGCTTTATCCTTCTTGATGTCATTCCAGTAGGgtaagttatt ... ctttctgcagGGCAATTGTCCTTGC
EST: CAGATGAAATCAAAATGTTGCTTTATCCTTCTTGATGTCATTCCAGTAGG GGCAATTGTCCTTEST: gi|211252873|gb|FL444295.1|FL444295
genomic: CAGATGAAATCAAAATGTTGCTTTATCCTTCTTGATGTCATTCCAGTAGGgtaagttatt ... ctttctgcagGGCAATTGTCCTT
EST: CAGATGAAATCAAAATGTTGCTTTATCCTTCTTGATGTCATTCCAGTAGG GGCAATTGTCCT
genomic: CAGATGAAATCAAAATGTTGCTTTATCCTTCTTGATGTCATTCCAGTAGGgtaagttatt ... ctttctgcagGGCAATTGTCCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGCCAACAAGTGCTGTAACATGGCTATATGTTAGCCTTTTGGATTTTATTCAGATGAAATCAAAATGTTGCTTTATCCTTCTTGATGTCATTCCAGTAGGgtaagttattgttaaaattcatataaacgttctatatttcgttgtttaagatttttttaatttcagtacactagcttatcactattgtttcttgatttca
- - - - - - - - - - - - - - - - - - - - - - - - - CAGATG