1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GTACTTCAAGGGGCCTGAGCTTCTTGTTGACTTGCAAGATTATGATTACTCTTTGGACATGTGGAGTCTGGGCTGCATGTTTGCTGGGATGgtatttacccacattactattccacctatttgctgccatatcctgatatcctcctttggtatctctgacggtttcttatagaaataactggtactgatttgctgttctgattgcag
species | Zea mays |
transcript | GRMZM2G143602_T03 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: ATGATTACTCTTTGGACATGTGGAGTCTGGGCTGCATGTTTGCTGGGATG ATTTTTCGTAAGGAACCATTTTTCTACGGGCATGACAACCATGATCAACTTEST: gi|19822196|gb|BQ048220.1|BQ048220
genomic: ATGATTACTCTTTGGACATGTGGAGTCTGGGCTGCATGTTTGCTGGGATGgtatttaccc ... ctgattgcagATTTTTCGTAAGGAACCATTTTTCTACGGGCATGACAACCATGATCAACTT
EST: ATGATTACTCTTTGGACATGTGGAGTCTGGGCTGCATGTTTGCTGGGATG ATTTTTCGTAAGGAACCATTTTTCTACGGGCATGACAACCATGATCAACTTEST: gi|21389960|gb|BQ528009.1|BQ528009
genomic: ATGATTACTCTTTGGACATGTGGAGTCTGGGCTGCATGTTTGCTGGGATGgtatttaccc ... ctgattgcagATTTTTCGTAAGGAACCATTTTTCTACGGGCATGACAACCATGATCAACTT
EST: ATGATTACTCTTTGGACATGTGGAGTCTGGGCTGCATGTTTGCTGGGATG ATTTTTCGTAAGGAACCATTTTTCTACGGGCATGACAACCATGATCAACTTEST: gi|29576768|gb|CB616880.1|CB616880
genomic: ATGATTACTCTTTGGACATGTGGAGTCTGGGCTGCATGTTTGCTGGGATGgtatttaccc ... ctgattgcagATTTTTCGTAAGGAACCATTTTTCTACGGGCATGACAACCATGATCAACTT
EST: ATGATTACTCTTTGGACATGTGGAGTCTGGGCTGCATGTTTGCTGGGATG ATTTTTCGTAAGGAEST: gi|20507674|gb|BQ279724.1|BQ279724
genomic: ATGATTACTCTTTGGACATGTGGAGTCTGGGCTGCATGTTTGCTGGGATGgtatttaccc ... ctgattgcagATTTTTCGTAAGGA
EST: ATGATTACTCTTTGGACATGTGGAGTCTGGGCTGCATGTTTGCTGGGATG ATTTTTCGTAAGGAACCATTTTTCTACGGGCATGGCAACCATGATCAGCTTEST: gi|60348663|gb|DN215636.1|DN215636
genomic: ATGATTACTCTTTGGACATGTGGAGTCTGGGCTGCATGTTTGCTGGGATGgtatttaccc ... ctgattgcagATTTTTCGTAAGGAACCATTTTTCTACGGGCATGACAACCATGATCAACTT
EST: ATGATTACTCTTTGGACATGTGGAGTCTGGGCTGCATGTTTGCTGGGATG ATTTTTCGTAAGGAACCATTTTTCTACGGGCATGACAACCATGATCAACTTEST: gi|87156472|gb|DY401261.1|DY401261
genomic: ATGATTACTCTTTGGACATGTGGAGTCTGGGCTGCATGTTTGCTGGGATGgtatttaccc ... ctgattgcagATTTTTCGTAAGGAACCATTTTTCTACGGGCATGACAACCATGATCAACTT
EST: ATGATTACTCTTTGGACATGTGGAGTCTGGGCTGCATGTTTGCTGGGATG -TTTTTCGTAAGGAACCATTTEST: gi|71770653|gb|DR968590.1|DR968590
genomic: ATGATTACTCTTTGGACATGTGGAGTCTGGGCTGCATGTTTGCTGGGATGgtatttaccc ... ctgattgcagATTTTTCGTAAGGAACCATTT
EST: ATGATTACTCTTTGGACATGTGGAGTCTGGGCTGCATGTTTGCTGGGATG ATTTTTCGTAAGGAACCATTTTTCTACGGGCATGACAACTATGATCAACTT
genomic: ATGATTACTCTTTGGACATGTGGAGTCTGGGCTGCATGTTTGCTGGGATGgtatttaccc ... ctgattgcagATTTTTCGTAAGGAACCATTTTTCTACGGGCATGACAACCATGATCAACTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTACTTCAAGGGGCCTGAGCTTCTTGTTGACTTGCAAGATTATGATTACTCTTTGGACATGTGGAGTCTGGGCTGCATGTTTGCTGGGATGgtatttacccacattactattccacctatttgctgccatatcctgatatcctcctttggtatctctgacggtttcttatagaaataactggtactgatttgctgttctgattgcag
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