1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
TCTCTCTCAACTATGACAAAGCTTATGAACTGCCTCCAGGCATTCCATCACACAAGTTTGCAGAGTATTCCGTATCAGGACTGACAGATGCCAGTGAAAAgtaagtgaccatacttctttctgtattttcaagttcaagtcttgatcataagaaactaaagtactaaacattcttattgtaattcatccttttaaacata...
species | Zea mays |
transcript | GRMZM2G020040_T01 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CACAAGTTTGCAGAGTATTCCGTATCAGGATTGACAGATGCCAGTGAAAA GTATGCAAACCGTAATTTATCTGCACCCATCAAAGCAAATCTACATTTTTCEST: gi|78179804|gb|DV550177.1|DV550177
genomic: CACAAGTTTGCAGAGTATTCCGTATCAGGACTGACAGATGCCAGTGAAAAgtaagtgacc ... tctcaaccagGTATGCAAACCGTAATTTATCTGCACCCATCAAAGCAAATCTACATTTTTC
EST: CACAAGTTTGCAGAGTATTCCGTATCAGGATTGACAGATGCCAGTGAAAA GTATGCAAACCGTAATTTATCTGCACCCATCAAAGCAAATCTACATTTTTCEST: gi|13382246|gb|BG458921.1|BG458921
genomic: CACAAGTTTGCAGAGTATTCCGTATCAGGACTGACAGATGCCAGTGAAAAgtaagtgacc ... tctcaaccagGTATGCAAACCGTAATTTATCTGCACCCATCAAAGCAAATCTACATTTTTC
EST: CACAAGTTTGCAGAGTATTCCGTATCAGGACTGACAGATGCCAGTGAAAA GTATGCAAACCGTAATTEST: gi|32868507|gb|CF008189.1|CF008189
genomic: CACAAGTTTGCAGAGTATTCCGTATCAGGACTGACAGATGCCAGTGAAAAgtaagtgacc ... tctcaaccagGTATGCAAACCGTAATT
EST: CACAAGTTTGCAGAGTATTCCGTATCAGGACTGACAGATGCCAGTGAAAA GTATGCAAACCGTAATTTATCTGCACCCATCAAAGCAAATCTACATTTTTCEST: gi|12047102|gb|BF729241.1|BF729241
genomic: CACAAGTTTGCAGAGTATTCCGTATCAGGACTGACAGATGCCAGTGAAAAgtaagtgacc ... tctcaaccagGTATGCAAACCGTAATTTATCTGCACCCATCAAAGCAAATCTACATTTTTC
EST: CACAAGTTTGCAGAGTATTCCGTATCAGGATTGACAGATGCCAGTGAAAA GTATGCAAACCGTAATTTATCTGCACCCATCAAAGCAAATCTACAT
genomic: CACAAGTTTGCAGAGTATTCCGTATCAGGACTGACAGATGCCAGTGAAAAgtaagtgacc ... tctcaaccagGTATGCAAACCGTAATTTATCTGCACCCATCAAAGCAAATCTACAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCTCTCTCAACTATGACAAAGCTTATGAACTGCCTCCAGGCATTCCATCACACAAGTTTGCAGAGTATTCCGTATCAGGACTGACAGATGCCAGTGAAAAgtaagtgaccatacttctttctgtattttcaagttcaagtcttgatcataagaaactaaagtactaaacattcttattgtaattcatccttttaaacata
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG