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AACCATCCATTCAGATTTCAAGTCTGGTCTAGAAGGCCTTCTGAAGGAGAAGCCCACCAAAGCAATTTTCATTGGCACAAGAATTGGTGATCCAAATGCGgtgattttcttttaccattgctcatttgttgttaacaaccccttgcacctattgtacgcaatgattatgcccatggtgttcccagttccttacagttttggtatctcactgaactttgagtaaacacaattttgaaatgatag
species | Zea mays |
transcript | GRMZM2G381933_T04 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: AGCCCACGAAAGCAATTTTCATTGGCACAAGAATTGGTGATCCAAATGCG GTTGGTCAAGAACAGTTCTCTCCTAGTTCACCTGGCTGGCCTCCTTTTATGEST: gi|211136284|gb|FL006476.1|FL006476
genomic: AGCCCACCAAAGCAATTTTCATTGGCACAAGAATTGGTGATCCAAATGCGgtgattttct ... gaaatgatagGTTGGTCAAGAACAGTTCTCTCCTAGTTCACCTGGCTGGCCTCCTTTTATG
EST: GCCCACGAAAGCA-TTTTCATTGGCACAAGAATTGTTGATCCAAATGCCG GTGGGTCA-GAACAGTTCTCTCCTAEST: gi|33770862|gb|CF273156.1|CF273156
genomic: GCCCACCAAAGCAATTTTCATTGGCACAAGAATTGGTGATCCAAATGC-Ggtgattttct ... gaaatgatagGTTGGTCAAGAACAGTTCTCTCCTA
EST: AGCCCACCAAAGCAATTTTCATTGGCACAAGAATTGGTGATCCAAATGCG GTTGGTCAAGAACAGTTCTCTCCTAGTTCACCTGGCTGGCCTCCTTTTATGEST: gi|74242522|gb|DT650436.1|DT650436
genomic: AGCCCACCAAAGCAATTTTCATTGGCACAAGAATTGGTGATCCAAATGCGgtgattttct ... gaaatgatagGTTGGTCAAGAACAGTTCTCTCCTAGTTCACCTGGCTGGCCTCCTTTTATG
EST: AGCCCACCAAAGCAATTTTCATTGGCACAAGAATTGGTGATCCAAATGCG GTTGGTCAGGAACAGTTCTCTCCTAGTTCACCTGGCTGGCCTCCTTTTATGEST: gi|31353159|gb|CD437516.1|CD437516
genomic: AGCCCACCAAAGCAATTTTCATTGGCACAAGAATTGGTGATCCAAATGCGgtgattttct ... gaaatgatagGTTGGTCAAGAACAGTTCTCTCCTAGTTCACCTGGCTGGCCTCCTTTTATG
EST: AGCCCACCAAAGCAATTTTCATTGGCACAAGAATTGGTGATCCAAATGCG GTTGGTCAAGAACAGTTCTCTCCTAGTTCACCTGGCTGGCCTCCTTTTATGEST: gi|32932020|gb|CF036832.1|CF036832
genomic: AGCCCACCAAAGCAATTTTCATTGGCACAAGAATTGGTGATCCAAATGCGgtgattttct ... gaaatgatagGTTGGTCAAGAACAGTTCTCTCCTAGTTCACCTGGCTGGCCTCCTTTTATG
EST: AGCCCACCAAAGCAATTTTCATTGGCACAAGAATTGGTGATCCAAATGCG GTTGGTCAAGAACAGTTCTCTCCTAGTTCACCTGGCTGGCCTCCTTTTATG
genomic: AGCCCACCAAAGCAATTTTCATTGGCACAAGAATTGGTGATCCAAATGCGgtgattttct ... gaaatgatagGTTGGTCAAGAACAGTTCTCTCCTAGTTCACCTGGCTGGCCTCCTTTTATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AACCATCCATTCAGATTTCAAGTCTGGTCTAGAAGGCCTTCTGAAGGAGAAGCCCACCAAAGCAATTTTCATTGGCACAAGAATTGGTGATCCAAATGCGgtgattttcttttaccattgctcatttgttgttaacaaccccttgcacctattgtacgcaatgattatgcccatggtgttcccagttccttacagttttggtatctcactgaactttgagtaaacacaattttgaaatgatag
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