1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GGAGTTCTCCAAGAGGAAGAAGAAAGGGAAGCTCCCCAAGGAGGCGAGGCAGAAGTTGCTGCACTGGTGGGAGCTGCACTACAAGTGGCCCTACCCTTCTgtaagaccctacctatgtttccttccatccatgcattgctaatacaacggcaactactgtgtctatgtttggaagaagaaaaaaaatgaagcttttgatgcatgactactgtttcgagtactcaccag
species | Zea mays |
transcript | GRMZM2G135447_T01 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: AGAAGTTGCTGCACTGGTGGGAGCTGCACTACAAGTGGCCCTACCCTTCT GAGACGGAGAAGATGGCGCTCGCAGAGACGACCGGGCTGGACCCGAAGCAGEST: gi|76017410|gb|DT944580.1|DT944580
genomic: AGAAGTTGCTGCACTGGTGGGAGCTGCACTACAAGTGGCCCTACCCTTCTgtaagaccct ... tactcaccagGAGACGGAGAAGATGGCGCTCGCAGAGACGACCGGGCTGGACCCGAAGCAG
EST: AGAAGTTGCTGCACTGGTGGGAGCTGCACTACAAGTGGCCCTACCCTTTT GAGACGGAGAAGATGGCGCTCGCAGAGACGACCGGGCTGGACCCGAAGCAG
genomic: AGAAGTTGCTGCACTGGTGGGAGCTGCACTACAAGTGGCCCTACCCTTCTgtaagaccct ... tactcaccagGAGACGGAGAAGATGGCGCTCGCAGAGACGACCGGGCTGGACCCGAAGCAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAGTTCTCCAAGAGGAAGAAGAAAGGGAAGCTCCCCAAGGAGGCGAGGCAGAAGTTGCTGCACTGGTGGGAGCTGCACTACAAGTGGCCCTACCCTTCTgtaagaccctacctatgtttccttccatccatgcattgctaatacaacggcaactactgtgtctatgtttggaagaagaaaaaaaatgaagcttttgatgcatgactactgtttcgagtactcaccag
- - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC