1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GGCAAGTGGGAAAGGGAACATACAATGGAGGACATCCTGAGCAGCTTAAAAAGGGAGATGTCAACTCCTCAGAACCGCAGGCTGTACCAACCTCATGAAGgtatttccttctgctcattactccagtaccttatatgctgacaatgctgtagctacttgaagtaatctttcttgaatatccgaaaccttgccaagactag...
species | Zea mays |
transcript | GRMZM2G090172_T02 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: AAGGGAGATGTCAACTCCTCAGAACCGCAGGCTGTACCAACCTCATGAAG GTAATGAAGATCAAAGAGTAGAGCAGAAAGGGCTGTCCCTTAGATGTGCCGEST: gi|91056900|gb|EB167318.1|EB167318
genomic: AAGGGAGATGTCAACTCCTCAGAACCGCAGGCTGTACCAACCTCATGAAGgtatttcctt ... ttctttgcagGTAATGAAGATCAAAGAGTAGAGCAGAAAGGGCTGTCCCTTAGATGTGCCG
EST: AAGGGAGATGTCAACTCCTCAGAACCGCAGGCTGTACCAACCTCATGAAG GTAATGAAGATCAAAGAGTAGAGCAGAAAGGGCTGTCCCTTAGATGTGCCGEST: gi|71758996|gb|DR956933.1|DR956933
genomic: AAGGGAGATGTCAACTCCTCAGAACCGCAGGCTGTACCAACCTCATGAAGgtatttcctt ... ttctttgcagGTAATGAAGATCAAAGAGTAGAGCAGAAAGGGCTGTCCCTTAGATGTGCCG
EST: AAGGGAGATGTCAACTCTTCAGAACCGCAGGCTGTACCAACCTCATGAAG GTAATGAAGATCAAAGAGTAGAGCAGAAAGGGCTGTCCCTTAGATGTGCCGEST: gi|71438019|gb|DR819069.1|DR819069
genomic: AAGGGAGATGTCAACTCCTCAGAACCGCAGGCTGTACCAACCTCATGAAGgtatttcctt ... ttctttgcagGTAATGAAGATCAAAGAGTAGAGCAGAAAGGGCTGTCCCTTAGATGTGCCG
EST: AAGGGAGATGTCAACTCCTCAGAACCGCAGGCTGTACCAACCTCATGAAG GTAATGAAGATCAAAGAGTAGAGCAGATAGGGCTGTCCCTTAGATGTGCCG
genomic: AAGGGAGATGTCAACTCCTCAGAACCGCAGGCTGTACCAACCTCATGAAGgtatttcctt ... ttctttgcagGTAATGAAGATCAAAGAGTAGAGCAGAAAGGGCTGTCCCTTAGATGTGCCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGCAAGTGGGAAAGGGAACATACAATGGAGGACATCCTGAGCAGCTTAAAAAGGGAGATGTCAACTCCTCAGAACCGCAGGCTGTACCAACCTCATGAAGgtatttccttctgctcattactccagtaccttatatgctgacaatgctgtagctacttgaagtaatctttcttgaatatccgaaaccttgccaagactag
- - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC