1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GTTTATGCTGATGGAGATAGCTCAGTGTCGACATATGAAAGGCGGGCAAGCCTTAGGGAATTCTACGgtagtctctagcctatatgagcgtgttgtaacccctgcatcaatctgctttggactggaattctcataagtcttcttccattgcag
species | Zea mays |
transcript | GRMZM2G171967_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TAGCTCAGTGTCGACATATGAAAGGCGGGCAAGCCTTAGGGAATTCTACG CAATTATCTATCCGATTCTGCAGCAGCTTGAEST: gi|78076532|gb|DV504966.1|DV504966
genomic: TAGCTCAGTGTCGACATATGAAAGGCGGGCAAGCCTTAGGGAATTCTACGgtagtctcta ... tccattgcagCAATTATCTATCCGATTCTGCAGCAGCTTGA
EST: TAGCTCAGTGTCGACATATGAAAGGCGGGCAAGCCTTAGGGAATTCTACG CAATTATCTATCCGATTCTGCAGCAGCTTGAGAGTAGTTTGATCGAGAGGGEST: gi|211383691|gb|FL114692.1|FL114692
genomic: TAGCTCAGTGTCGACATATGAAAGGCGGGCAAGCCTTAGGGAATTCTACGgtagtctcta ... tccattgcagCAATTATCTATCCGATTCTGCAGCAGCTTGAGAGTAGTTTGATCGAGAGGG
EST: TAGCTCAGTGTCGACATATGAAAGGCGGGCAAGCCTTAGGGAATTCTACG CAATTATCTATCCGATTCTGCAGCAGCTTGAGAGT
genomic: TAGCTCAGTGTCGACATATGAAAGGCGGGCAAGCCTTAGGGAATTCTACGgtagtctcta ... tccattgcagCAATTATCTATCCGATTCTGCAGCAGCTTGAGAGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTTATGCTGATGGAGATAGCTCAGTGTCGACATATGAAAGGCGGGCAAGCCTTAGGGAATTCTACGgtagtctctagcctatatgagcgtgttgtaacccctgcatcaatctgctttggactggaattctcataagtcttcttccattgcag
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