1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GTTTGGTTGAGACAGACCCAGAGGGTGCACTTGCTGGTTTTGATCAAGTAGTCAGTATGGAGCCTGAAAAAGCTGAATGgtaagtgagaattcgatttatttaacattctctctattctgtctcatatgtttttcctgttcctgtgacagtatgaatgctaaagtgtatttatcagcct...
species | Zea mays |
transcript | GRMZM2G132804_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CTTGCTGGTTTTGATCAAGTAGTCAGTATGGAGCCTGAAAAAGCTGAATG GGGATTTAAAGCTCTTAAACAAACTGTCAAGCTTTACTATAAGCTGGGAAAEST: gi|31664621|gb|CD573554.1|CD573554
genomic: CTTGCTGGTTTTGATCAAGTAGTCAGTATGGAGCCTGAAAAAGCTGAATGgtaagtgaga ... atctttatagGGGATTTAAAGCTCTTAAACAAACTGTCAAGCTTTACTATAAGCTGGGAAA
EST: CTTGCTGGTTTTGATCAAGTAGTCAGTATGGAGCCTGAAAAAGCTGAATG GGGATTTAAAGCTCTTAAACAAACTGTCAAGCTTTACTATAAGCTGGGAAAEST: gi|29946668|gb|CB816265.1|CB816265
genomic: CTTGCTGGTTTTGATCAAGTAGTCAGTATGGAGCCTGAAAAAGCTGAATGgtaagtgaga ... atctttatagGGGATTTAAAGCTCTTAAACAAACTGTCAAGCTTTACTATAAGCTGGGAAA
EST: CTTGCTGGTTTTGATCAAGTAGTCAGTATGGAGCCTGAAAAAGCTGAATG GGGATTTAAAGCTCTTAAACAAACTGTCAAGCTTTACTATAAGCTGGGAAAEST: gi|211131141|gb|FL290028.1|FL290028
genomic: CTTGCTGGTTTTGATCAAGTAGTCAGTATGGAGCCTGAAAAAGCTGAATGgtaagtgaga ... atctttatagGGGATTTAAAGCTCTTAAACAAACTGTCAAGCTTTACTATAAGCTGGGAAA
EST: CTTGCTGGTTTTGATCAAGTAGTCAGTATGGAGCCTGAAAAAGCTGAATG GGGATTTAAAGCTCTTAAACAAACTGTCAAGCTTTACTATAAGCTGGGAAAEST: gi|9731371|gb|BE510123.1|BE510123
genomic: CTTGCTGGTTTTGATCAAGTAGTCAGTATGGAGCCTGAAAAAGCTGAATGgtaagtgaga ... atctttatagGGGATTTAAAGCTCTTAAACAAACTGTCAAGCTTTACTATAAGCTGGGAAA
EST: CTTGCTGGTTTTGATCAAGTAGTCAGTATGGAGCCTGAAAAAGCTGAATG GGGATTTAAAGCTCTTAAACAAACTGTCAAGCTTTACTATAAGCTGGGAAAEST: gi|29946544|gb|CB816202.1|CB816202
genomic: CTTGCTGGTTTTGATCAAGTAGTCAGTATGGAGCCTGAAAAAGCTGAATGgtaagtgaga ... atctttatagGGGATTTAAAGCTCTTAAACAAACTGTCAAGCTTTACTATAAGCTGGGAAA
EST: CTTGCTGGTTTTGATCAAGTAGTCAGTATGGAGCCTGAAAAAGCTGAATG GGGATTTAAAGCTCTTAAACAAACTGTCAAGCTTTACTATAAGCTGGGAAAEST: gi|9461676|gb|BE453849.1|BE453849
genomic: CTTGCTGGTTTTGATCAAGTAGTCAGTATGGAGCCTGAAAAAGCTGAATGgtaagtgaga ... atctttatagGGGATTTAAAGCTCTTAAACAAACTGTCAAGCTTTACTATAAGCTGGGAAA
EST: CTTGCTGGTTTTGATCAAGTAGTCAGTATGGAGCCTGAAAAAGCTGAATG GGGATTTAAAGCTCTTAAACAAACTGTCAAGCTTTACTATAAGCTGGGAAAEST: gi|211131142|gb|FL290029.1|FL290029
genomic: CTTGCTGGTTTTGATCAAGTAGTCAGTATGGAGCCTGAAAAAGCTGAATGgtaagtgaga ... atctttatagGGGATTTAAAGCTCTTAAACAAACTGTCAAGCTTTACTATAAGCTGGGAAA
EST: CTTGCTGGTTTTGATCAAGTAGTCAGTATGGAGCCTGAAAAAGCTGAATG GGGATTTAAAGCTCTTAAACAAACTGTCAAGCTTTACTATAAGCTGGGAAA
genomic: CTTGCTGGTTTTGATCAAGTAGTCAGTATGGAGCCTGAAAAAGCTGAATGgtaagtgaga ... atctttatagGGGATTTAAAGCTCTTAAACAAACTGTCAAGCTTTACTATAAGCTGGGAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTTGGTTGAGACAGACCCAGAGGGTGCACTTGCTGGTTTTGATCAAGTAGTCAGTATGGAGCCTGAAAAAGCTGAATGgtaagtgagaattcgatttatttaacattctctctattctgtctcatatgtttttcctgttcctgtgacagtatgaatgctaaagtgtatttatcagcct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA