1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CAAGAGCTCAGATAGCAGCCAGTACAATATAGAAGAACTGGAAATGTTGTTGGAGGCCTACTTTGTTGTTATCGATTACACCCTCAGCAAGTTGACTTCGgtacaaactatgaattgtgtatatgttagctttgtttctgttttacagattattatggttgacaattttgctactcgcacattttttcag
species | Zea mays |
transcript | GRMZM2G064467_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TGGAGGCCTACTTTGTTGTTATCGATTACACCCTCAGCAAGTTGACTTCG CTAAAGGAGTATATTGATGACACAGAAGATTTCATCAACATACAACTGEST: gi|78074757|gb|DV503191.1|DV503191
genomic: TGGAGGCCTACTTTGTTGTTATCGATTACACCCTCAGCAAGTTGACTTCGgtacaaacta ... attttttcagCTAAAGGAGTATATTGATGACACAGAAGATTTCATCAACATACAACTG
EST: TGGAGGCCTACTTTGTTGTTATCGATTACACCCTCAGCAAGTTGACTTCG CTAAAGGAGTATATTGATGACACAGAAGATTTCATCAACATACAACTGEST: gi|71430211|gb|DR811261.1|DR811261
genomic: TGGAGGCCTACTTTGTTGTTATCGATTACACCCTCAGCAAGTTGACTTCGgtacaaacta ... attttttcagCTAAAGGAGTATATTGATGACACAGAAGATTTCATCAACATACAACTG
EST: TGGAGGCCTACTTTGTTGTTATCGATTACACCCTCAGCAAGTTGACTTCG CTAAAGGAGTATATTGATGACACAGAAGATTTCATCAACATACAACTG
genomic: TGGAGGCCTACTTTGTTGTTATCGATTACACCCTCAGCAAGTTGACTTCGgtacaaacta ... attttttcagCTAAAGGAGTATATTGATGACACAGAAGATTTCATCAACATACAACTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAAGAGCTCAGATAGCAGCCAGTACAATATAGAAGAACTGGAAATGTTGTTGGAGGCCTACTTTGTTGTTATCGATTACACCCTCAGCAAGTTGACTTCGgtacaaactatgaattgtgtatatgttagctttgtttctgttttacagattattatggttgacaattttgctactcgcacattttttcag
- - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG