1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GTTGCTAATTTCATGGGCCATTTCCAGTGGTTAACATGCCCAAGAAAGgtatagtttctcatggatgattttttttgcctgtcactacaaaatttctcaattccttattccccatcagcgttgtcattgatatatgggccccagttca...
species | Zea mays |
transcript | GRMZM2G062416_T04 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GTTGCTAATTTCATGGGCCATTTCCAGTGGTTAACATGCCCAAGAAAG GATCTATCAACTGGATGGCTTTATTGTGACCCAGGTCCCATGTTTACACCAEST: gi|24773898|gb|CA409152.1|CA409152
genomic: GTTGCTAATTTCATGGGCCATTTCCAGTGGTTAACATGCCCAAGAAAGgtatagtttc ... gtgtttatagGATCTATCAACTGGATGGCTTTATTGTGACCCAGGTCCCATGTTTACACCA
EST: GTTGCTAATTTCATGGGCCATTTCCAGTGGTTAACATGCCCAAGAAAG GATCTATCAACTGGATGGCTTTATTGTGACCCAGGTCCCATGTTTACACCAEST: gi|78074248|gb|DV502682.1|DV502682
genomic: GTTGCTAATTTCATGGGCCATTTCCAGTGGTTAACATGCCCAAGAAAGgtatagtttc ... gtgtttatagGATCTATCAACTGGATGGCTTTATTGTGACCCAGGTCCCATGTTTACACCA
EST: GTTGCTAATTTCATGGGCCATTTCCAGTGGTTAACATGCCCAAGAAAG GATCTATCAACTGGATGGCTTTATTGTGACCCAGGTCCCATGTTTACACCA
genomic: GTTGCTAATTTCATGGGCCATTTCCAGTGGTTAACATGCCCAAGAAAGgtatagtttc ... gtgtttatagGATCTATCAACTGGATGGCTTTATTGTGACCCAGGTCCCATGTTTACACCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTGCTAATTTCATGGGCCATTTCCAGTGGTTAACATGCCCAAGAAAGgtatagtttctcatggatgattttttttgcctgtcactacaaaatttctcaattccttattccccatcagcgttgtcattgatatatgggccccagttca
- - - - - - - - - - - - - - - - - - - - AAGAAA