1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GCTTTCAAAGATAGAGATCCAGCTTGTGCCCAATATAGTTGGGCACTGTTATACTTAAAGgtgcgtatttatgatatccattccaggatgttgtctgagcagggagaatttggttgctcattttactttgtagtgtagggttgaattgcctttggccccc...
species | Zea mays |
transcript | GRMZM2G048740_T03 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ATAGAGATCCAGCTTGTGCCCAATATAGTTGGGCACTGTTATACTTAAAG GGCTACCAATCGTTGCAATCATACAGGATAGCCAATATATTATGGAACCAGEST: gi|71320313|gb|DR796903.1|DR796903
genomic: ATAGAGATCCAGCTTGTGCCCAATATAGTTGGGCACTGTTATACTTAAAGgtgcgtattt ... ctgttttcagGGCTACCAATCGTTGCAATCATACAGGATAGCCAATATATTATGGAACCAG
EST: ATAGAGATCCAGCTTGTGCCCAATATAGTTGGGCACTGTTATACTTAAAG GGCTACCAATCGTTGCAATCATACAGGATAGCCAATATATTATGGAACCAGEST: gi|149078416|gb|EE167191.2|EE167191
genomic: ATAGAGATCCAGCTTGTGCCCAATATAGTTGGGCACTGTTATACTTAAAGgtgcgtattt ... ctgttttcagGGCTACCAATCGTTGCAATCATACAGGATAGCCAATATATTATGGAACCAG
EST: ATAGAGATCCAGCTTGTGCCCAATATAGTTGGGCACTGTTATACTTAAAG GGCTACCAATCGTTGCAATCATACAGGATAGCCAATATATTATGGAACCAGEST: gi|93012509|gb|EB638029.1|EB638029
genomic: ATAGAGATCCAGCTTGTGCCCAATATAGTTGGGCACTGTTATACTTAAAGgtgcgtattt ... ctgttttcagGGCTACCAATCGTTGCAATCATACAGGATAGCCAATATATTATGGAACCAG
EST: ATAGAGATCCAGCTTGTGCCCAATATAGTTGGGCACTGTTATACTTAAAG GGCTACCAATCGTTGCAATCATACAGGATAGCCAATATATTATGGAACCAGEST: gi|71434262|gb|DR815312.1|DR815312
genomic: ATAGAGATCCAGCTTGTGCCCAATATAGTTGGGCACTGTTATACTTAAAGgtgcgtattt ... ctgttttcagGGCTACCAATCGTTGCAATCATACAGGATAGCCAATATATTATGGAACCAG
EST: ATAAAGATCCAGCTTGTGCCCAATATAGTTGGGCACTGTTATACTTAAAG GGCTACCAATCGTTGCAATCATACAGGATAGCCAATATATTATGGAACCAGEST: gi|71771744|gb|DR969681.1|DR969681
genomic: ATAGAGATCCAGCTTGTGCCCAATATAGTTGGGCACTGTTATACTTAAAGgtgcgtattt ... ctgttttcagGGCTACCAATCGTTGCAATCATACAGGATAGCCAATATATTATGGAACCAG
EST: ATAGAGATCCAGCTTGTGCCCAATATAGTTGGGCACTGTTATACTTTAAG GGCTACCAATCGTTGCAATCATACAGGATAGCCAATATATTATGGAAACAG
genomic: ATAGAGATCCAGCTTGTGCCCAATATAGTTGGGCACTGTTATACTTAAAGgtgcgtattt ... ctgttttcagGGCTACCAATCGTTGCAATCATACAGGATAGCCAATATATTATGGAACCAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCTTTCAAAGATAGAGATCCAGCTTGTGCCCAATATAGTTGGGCACTGTTATACTTAAAGgtgcgtatttatgatatccattccaggatgttgtctgagcagggagaatttggttgctcattttactttgtagtgtagggttgaattgcctttggccccc
- - - - - - GAGATC