1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CCTGGGCCTCGAGATGGAACTATTCAGTGTTTTATTAAGAGGGATACATCTACCCAAATCTACAGTCTGTACCTTAGTTTTAGCTCTGgtaagtctattgttgtgtggactattggaattttcggtaaaagtctggcatctgtgtttagattcagaacttaaaaactctgtagaaagaatgcgagata...
species | Zea mays |
transcript | GRMZM2G046816_T04 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GAGGGATAAATCTACCCAACTCTACAGTCTGTACCTTAGTTTTAGCTCTG CCGTGCCTGTCGAAAATGGCAAATTCCTTCTATCCGCAAAAAGGAACTGCCEST: gi|31360425|gb|CD444782.1|CD444782
genomic: GAGGGATACATCTACCCAAATCTACAGTCTGTACCTTAGTTTTAGCTCTGgtaagtctat ... gtttctgcagCCGTGCCTGTCGAAAATGGCAAATTCCTTCTATCCGCAAAAAGGAACTGCC
EST: GAGGGATAAATCTACCCAAATCTACAGTCTGTACCTTAGTTTTAGCTCTG CCGTGCCTGTCGAAAATGGCAAATTCCTTCTATCCGCAAAAAGGAACTGCCEST: gi|67042292|gb|CO468547.1|CO468547
genomic: GAGGGATACATCTACCCAAATCTACAGTCTGTACCTTAGTTTTAGCTCTGgtaagtctat ... gtttctgcagCCGTGCCTGTCGAAAATGGCAAATTCCTTCTATCCGCAAAAAGGAACTGCC
EST: GAGGGATATTTCTCCCCAAATCTACAGTCTGTACCTTAGTTTTAGCTCTG CCGTGCCTGTCGAAAATGGCAAATTCCTTCTATCCGCAAAAAGGAACTGCCEST: gi|22819363|gb|BU499453.1|BU499453
genomic: GAGGGATACATCTACCCAAATCTACAGTCTGTACCTTAGTTTTAGCTCTGgtaagtctat ... gtttctgcagCCGTGCCTGTCGAAAATGGCAAATTCCTTCTATCCGCAAAAAGGAACTGCC
EST: GAGGGATACATCTACCCAAATCTACAGTCTGTACCTTAGTTTTAGCTCTG CCGTGCCTGTCGAAAATGGCAAATTCCTTCTATCCGCAAAAAGGAACTGCCEST: gi|26559903|gb|CA832138.1|CA832138
genomic: GAGGGATACATCTACCCAAATCTACAGTCTGTACCTTAGTTTTAGCTCTGgtaagtctat ... gtttctgcagCCGTGCCTGTCGAAAATGGCAAATTCCTTCTATCCGCAAAAAGGAACTGCC
EST: GAGGGATACATCTACCCAAATCTACAGTCTGTACCTTAGTTTTAGCTCTG CCGTGCCTGTCGAAAATGGCAAATTCCTTCTATCCGCAAAAAGGAACTGCCEST: gi|87156288|gb|DY401077.1|DY401077
genomic: GAGGGATACATCTACCCAAATCTACAGTCTGTACCTTAGTTTTAGCTCTGgtaagtctat ... gtttctgcagCCGTGCCTGTCGAAAATGGCAAATTCCTTCTATCCGCAAAAAGGAACTGCC
EST: GAGGGATACATCTACCCAAATCTACAGTCTGTACCTTAGTTTTAGCTCTG CCGTGCCTGTCGAAAATGGCAAATTCCTTCTATCCGCAAAAAGGAACTGCCEST: gi|74238493|gb|DT646407.1|DT646407
genomic: GAGGGATACATCTACCCAAATCTACAGTCTGTACCTTAGTTTTAGCTCTGgtaagtctat ... gtttctgcagCCGTGCCTGTCGAAAATGGCAAATTCCTTCTATCCGCAAAAAGGAACTGCC
EST: GAGGGATACATCTACCCAAATCTACAGTCTGTACCTTAGTTTTAGCTCTG CCGTGCCTGTCGAAAATGGCAAATTCCTTCTATCCGCAAAAGGGA-CTGCC
genomic: GAGGGATACATCTACCCAAATCTACAGTCTGTACCTTAGTTTTAGCTCTGgtaagtctat ... gtttctgcagCCGTGCCTGTCGAAAATGGCAAATTCCTTCTATCCGCAAAAAGGAACTGCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCTGGGCCTCGAGATGGAACTATTCAGTGTTTTATTAAGAGGGATACATCTACCCAAATCTACAGTCTGTACCTTAGTTTTAGCTCTGgtaagtctattgttgtgtggactattggaattttcggtaaaagtctggcatctgtgtttagattcagaacttaaaaactctgtagaaagaatgcgagata
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -agaaagaa